Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2926 and PfGW456L13_2927 are separated by 139 nucleotides PfGW456L13_2927 and PfGW456L13_2928 are separated by 139 nucleotides
PfGW456L13_2926 - Cointegrate resolution protein S, at 3,263,196 to 3,264,134
_2926
PfGW456L13_2927 - Alkyl hydroperoxide reductase protein C (EC 1.6.4.-), at 3,264,274 to 3,264,837
_2927
PfGW456L13_2928 - Alkyl hydroperoxide reductase protein F (EC 1.6.4.-), at 3,264,977 to 3,266,539
_2928
Position (kb)
3264
3265 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3263.329 kb on - strand, within PfGW456L13_2926 at 3263.715 kb on + strand, within PfGW456L13_2926 at 3263.716 kb on - strand, within PfGW456L13_2926 at 3263.716 kb on - strand, within PfGW456L13_2926 at 3263.720 kb on - strand, within PfGW456L13_2926 at 3263.727 kb on - strand, within PfGW456L13_2926 at 3263.760 kb on + strand, within PfGW456L13_2926 at 3263.761 kb on - strand, within PfGW456L13_2926 at 3263.761 kb on - strand, within PfGW456L13_2926 at 3263.802 kb on + strand, within PfGW456L13_2926 at 3263.802 kb on + strand, within PfGW456L13_2926 at 3263.802 kb on + strand, within PfGW456L13_2926 at 3263.802 kb on + strand, within PfGW456L13_2926 at 3263.803 kb on - strand, within PfGW456L13_2926 at 3263.803 kb on - strand, within PfGW456L13_2926 at 3263.803 kb on - strand, within PfGW456L13_2926 at 3263.803 kb on - strand, within PfGW456L13_2926 at 3263.803 kb on - strand, within PfGW456L13_2926 at 3263.804 kb on + strand, within PfGW456L13_2926 at 3263.805 kb on - strand, within PfGW456L13_2926 at 3263.805 kb on - strand, within PfGW456L13_2926 at 3263.805 kb on - strand, within PfGW456L13_2926 at 3263.958 kb on + strand, within PfGW456L13_2926 at 3263.958 kb on + strand, within PfGW456L13_2926 at 3263.958 kb on + strand, within PfGW456L13_2926 at 3263.958 kb on + strand, within PfGW456L13_2926 at 3263.958 kb on + strand, within PfGW456L13_2926 at 3263.959 kb on - strand, within PfGW456L13_2926 at 3263.959 kb on - strand, within PfGW456L13_2926 at 3263.960 kb on + strand, within PfGW456L13_2926 at 3263.961 kb on - strand, within PfGW456L13_2926 at 3264.036 kb on + strand, within PfGW456L13_2926 at 3264.036 kb on + strand, within PfGW456L13_2926 at 3264.036 kb on + strand, within PfGW456L13_2926 at 3264.036 kb on + strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.037 kb on - strand, within PfGW456L13_2926 at 3264.072 kb on + strand at 3264.073 kb on - strand at 3264.108 kb on - strand at 3264.132 kb on + strand at 3264.132 kb on + strand at 3264.149 kb on + strand at 3264.153 kb on - strand at 3264.155 kb on + strand at 3264.155 kb on + strand at 3264.156 kb on - strand at 3264.156 kb on - strand at 3264.156 kb on - strand at 3264.156 kb on - strand at 3264.156 kb on - strand at 3264.168 kb on + strand at 3264.250 kb on + strand at 3264.251 kb on - strand at 3264.279 kb on + strand at 3264.279 kb on + strand at 3264.339 kb on - strand, within PfGW456L13_2927 at 3264.445 kb on + strand, within PfGW456L13_2927 at 3264.445 kb on + strand, within PfGW456L13_2927 at 3264.445 kb on + strand, within PfGW456L13_2927 at 3264.445 kb on + strand, within PfGW456L13_2927 at 3264.446 kb on - strand, within PfGW456L13_2927 at 3264.446 kb on - strand, within PfGW456L13_2927 at 3264.446 kb on - strand, within PfGW456L13_2927 at 3264.446 kb on - strand, within PfGW456L13_2927 at 3264.478 kb on + strand, within PfGW456L13_2927 at 3264.478 kb on + strand, within PfGW456L13_2927 at 3264.478 kb on + strand, within PfGW456L13_2927 at 3264.478 kb on + strand, within PfGW456L13_2927 at 3264.479 kb on - strand, within PfGW456L13_2927 at 3264.479 kb on - strand, within PfGW456L13_2927 at 3264.479 kb on - strand, within PfGW456L13_2927 at 3264.553 kb on + strand, within PfGW456L13_2927 at 3264.553 kb on + strand, within PfGW456L13_2927 at 3264.554 kb on - strand, within PfGW456L13_2927 at 3264.695 kb on + strand, within PfGW456L13_2927 at 3264.695 kb on + strand, within PfGW456L13_2927 at 3264.696 kb on - strand, within PfGW456L13_2927 at 3264.696 kb on - strand, within PfGW456L13_2927 at 3264.742 kb on + strand, within PfGW456L13_2927 at 3264.742 kb on + strand, within PfGW456L13_2927 at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.835 kb on + strand at 3264.836 kb on - strand at 3264.836 kb on - strand at 3264.836 kb on - strand at 3264.836 kb on - strand at 3264.836 kb on - strand at 3264.899 kb on - strand at 3264.947 kb on - strand at 3264.976 kb on + strand at 3264.976 kb on + strand at 3264.977 kb on - strand at 3264.977 kb on - strand at 3264.977 kb on - strand at 3265.126 kb on + strand at 3265.126 kb on + strand at 3265.126 kb on + strand at 3265.127 kb on - strand at 3265.343 kb on + strand, within PfGW456L13_2928 at 3265.343 kb on + strand, within PfGW456L13_2928 at 3265.343 kb on + strand at 3265.343 kb on + strand, within PfGW456L13_2928 at 3265.343 kb on + strand, within PfGW456L13_2928 at 3265.343 kb on + strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.344 kb on - strand, within PfGW456L13_2928 at 3265.404 kb on + strand, within PfGW456L13_2928 at 3265.496 kb on + strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.497 kb on - strand, within PfGW456L13_2928 at 3265.662 kb on - strand, within PfGW456L13_2928 at 3265.747 kb on + strand, within PfGW456L13_2928 at 3265.747 kb on + strand, within PfGW456L13_2928 at 3265.748 kb on - strand, within PfGW456L13_2928 at 3265.748 kb on - strand, within PfGW456L13_2928 at 3265.811 kb on + strand, within PfGW456L13_2928 at 3265.811 kb on + strand, within PfGW456L13_2928
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 3,263,329 - PfGW456L13_2926 0.14 +1.3 3,263,715 + PfGW456L13_2926 0.55 +0.9 3,263,716 - PfGW456L13_2926 0.55 +0.1 3,263,716 - PfGW456L13_2926 0.55 +0.7 3,263,720 - PfGW456L13_2926 0.56 +0.4 3,263,727 - PfGW456L13_2926 0.57 +0.6 3,263,760 + PfGW456L13_2926 0.60 +0.4 3,263,761 - PfGW456L13_2926 0.60 -0.1 3,263,761 - PfGW456L13_2926 0.60 +0.4 3,263,802 + PfGW456L13_2926 0.65 -1.0 3,263,802 + PfGW456L13_2926 0.65 +0.9 3,263,802 + PfGW456L13_2926 0.65 -0.0 3,263,802 + PfGW456L13_2926 0.65 -0.8 3,263,803 - PfGW456L13_2926 0.65 +0.4 3,263,803 - PfGW456L13_2926 0.65 -2.7 3,263,803 - PfGW456L13_2926 0.65 +0.2 3,263,803 - PfGW456L13_2926 0.65 -0.5 3,263,803 - PfGW456L13_2926 0.65 -0.7 3,263,804 + PfGW456L13_2926 0.65 +0.6 3,263,805 - PfGW456L13_2926 0.65 +0.7 3,263,805 - PfGW456L13_2926 0.65 +0.3 3,263,805 - PfGW456L13_2926 0.65 +0.8 3,263,958 + PfGW456L13_2926 0.81 -0.3 3,263,958 + PfGW456L13_2926 0.81 -1.0 3,263,958 + PfGW456L13_2926 0.81 +0.0 3,263,958 + PfGW456L13_2926 0.81 -0.3 3,263,958 + PfGW456L13_2926 0.81 -0.3 3,263,959 - PfGW456L13_2926 0.81 -0.5 3,263,959 - PfGW456L13_2926 0.81 -1.1 3,263,960 + PfGW456L13_2926 0.81 -0.1 3,263,961 - PfGW456L13_2926 0.81 +0.0 3,264,036 + PfGW456L13_2926 0.89 +0.6 3,264,036 + PfGW456L13_2926 0.89 -0.4 3,264,036 + PfGW456L13_2926 0.89 -1.3 3,264,036 + PfGW456L13_2926 0.89 -1.0 3,264,037 - PfGW456L13_2926 0.90 +0.3 3,264,037 - PfGW456L13_2926 0.90 -0.3 3,264,037 - PfGW456L13_2926 0.90 +0.1 3,264,037 - PfGW456L13_2926 0.90 -1.9 3,264,037 - PfGW456L13_2926 0.90 -1.0 3,264,037 - PfGW456L13_2926 0.90 -0.3 3,264,037 - PfGW456L13_2926 0.90 -0.4 3,264,037 - PfGW456L13_2926 0.90 -0.0 3,264,037 - PfGW456L13_2926 0.90 +0.7 3,264,037 - PfGW456L13_2926 0.90 -0.5 3,264,072 + +0.1 3,264,073 - +1.0 3,264,108 - -0.3 3,264,132 + +0.1 3,264,132 + -0.1 3,264,149 + -1.4 3,264,153 - -0.1 3,264,155 + -0.1 3,264,155 + +0.4 3,264,156 - +1.1 3,264,156 - -0.4 3,264,156 - +0.5 3,264,156 - +0.2 3,264,156 - +0.0 3,264,168 + +2.2 3,264,250 + -0.2 3,264,251 - +0.1 3,264,279 + +0.3 3,264,279 + -1.3 3,264,339 - PfGW456L13_2927 0.12 -0.9 3,264,445 + PfGW456L13_2927 0.30 -0.2 3,264,445 + PfGW456L13_2927 0.30 +0.4 3,264,445 + PfGW456L13_2927 0.30 -0.8 3,264,445 + PfGW456L13_2927 0.30 -2.3 3,264,446 - PfGW456L13_2927 0.30 -0.6 3,264,446 - PfGW456L13_2927 0.30 +0.7 3,264,446 - PfGW456L13_2927 0.30 -1.4 3,264,446 - PfGW456L13_2927 0.30 -1.1 3,264,478 + PfGW456L13_2927 0.36 -0.9 3,264,478 + PfGW456L13_2927 0.36 -0.3 3,264,478 + PfGW456L13_2927 0.36 +0.7 3,264,478 + PfGW456L13_2927 0.36 -0.2 3,264,479 - PfGW456L13_2927 0.36 -0.6 3,264,479 - PfGW456L13_2927 0.36 -0.3 3,264,479 - PfGW456L13_2927 0.36 -0.7 3,264,553 + PfGW456L13_2927 0.49 +0.9 3,264,553 + PfGW456L13_2927 0.49 +0.5 3,264,554 - PfGW456L13_2927 0.50 -0.9 3,264,695 + PfGW456L13_2927 0.75 -0.9 3,264,695 + PfGW456L13_2927 0.75 -1.1 3,264,696 - PfGW456L13_2927 0.75 -0.8 3,264,696 - PfGW456L13_2927 0.75 +0.4 3,264,742 + PfGW456L13_2927 0.83 -0.1 3,264,742 + PfGW456L13_2927 0.83 -1.8 3,264,835 + -0.0 3,264,835 + -0.7 3,264,835 + +0.2 3,264,835 + +0.0 3,264,835 + +1.0 3,264,835 + -0.1 3,264,835 + -0.2 3,264,835 + +0.4 3,264,835 + +0.1 3,264,836 - +1.0 3,264,836 - +0.1 3,264,836 - -0.1 3,264,836 - +0.2 3,264,836 - -0.1 3,264,899 - +2.2 3,264,947 - -0.3 3,264,976 + +0.1 3,264,976 + +0.5 3,264,977 - -0.2 3,264,977 - +0.5 3,264,977 - +0.8 3,265,126 + +0.1 3,265,126 + +0.9 3,265,126 + -0.3 3,265,127 - -0.2 3,265,343 + PfGW456L13_2928 0.23 -0.9 3,265,343 + PfGW456L13_2928 0.23 -0.0 3,265,343 + +1.3 3,265,343 + PfGW456L13_2928 0.23 -0.1 3,265,343 + PfGW456L13_2928 0.23 -1.2 3,265,343 + PfGW456L13_2928 0.23 -1.4 3,265,344 - PfGW456L13_2928 0.23 -0.5 3,265,344 - PfGW456L13_2928 0.23 +0.4 3,265,344 - PfGW456L13_2928 0.23 -1.4 3,265,344 - PfGW456L13_2928 0.23 -0.0 3,265,344 - PfGW456L13_2928 0.23 +0.0 3,265,344 - PfGW456L13_2928 0.23 +0.5 3,265,344 - PfGW456L13_2928 0.23 +0.6 3,265,404 + PfGW456L13_2928 0.27 +1.3 3,265,496 + PfGW456L13_2928 0.33 -0.9 3,265,497 - PfGW456L13_2928 0.33 -0.5 3,265,497 - PfGW456L13_2928 0.33 +0.3 3,265,497 - PfGW456L13_2928 0.33 -0.1 3,265,497 - PfGW456L13_2928 0.33 -0.3 3,265,497 - PfGW456L13_2928 0.33 -0.0 3,265,497 - PfGW456L13_2928 0.33 -0.4 3,265,497 - PfGW456L13_2928 0.33 -0.2 3,265,497 - PfGW456L13_2928 0.33 +1.3 3,265,497 - PfGW456L13_2928 0.33 -0.1 3,265,662 - PfGW456L13_2928 0.44 -0.3 3,265,747 + PfGW456L13_2928 0.49 +0.9 3,265,747 + PfGW456L13_2928 0.49 +0.5 3,265,748 - PfGW456L13_2928 0.49 -0.5 3,265,748 - PfGW456L13_2928 0.49 -1.2 3,265,811 + PfGW456L13_2928 0.53 -0.3 3,265,811 + PfGW456L13_2928 0.53 -1.7
Or see this region's nucleotide sequence