Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2650 and PfGW456L13_2651 are separated by 307 nucleotides PfGW456L13_2651 and PfGW456L13_2652 are separated by 65 nucleotides PfGW456L13_2652 and PfGW456L13_2653 are separated by 221 nucleotides
PfGW456L13_2650 - Thioredoxin reductase (EC 1.8.1.9), at 2,950,866 to 2,951,825
_2650
PfGW456L13_2651 - Cell division protein FtsK, at 2,952,133 to 2,954,544
_2651
PfGW456L13_2652 - Outer membrane lipoprotein carrier protein LolA, at 2,954,610 to 2,955,233
_2652
PfGW456L13_2653 - FIG065221: Holliday junction DNA helicase, at 2,955,455 to 2,956,777
_2653
Position (kb)
2952
2953
2954
2955 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2951.335 kb on + strand, within PfGW456L13_2650 at 2951.336 kb on - strand, within PfGW456L13_2650 at 2951.336 kb on - strand, within PfGW456L13_2650 at 2951.470 kb on + strand, within PfGW456L13_2650 at 2951.515 kb on + strand, within PfGW456L13_2650 at 2951.515 kb on + strand, within PfGW456L13_2650 at 2951.515 kb on + strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.516 kb on - strand, within PfGW456L13_2650 at 2951.581 kb on + strand, within PfGW456L13_2650 at 2951.756 kb on - strand at 2951.770 kb on + strand at 2951.839 kb on + strand at 2951.839 kb on + strand at 2951.901 kb on + strand at 2951.901 kb on + strand at 2951.939 kb on + strand at 2951.949 kb on + strand at 2951.949 kb on + strand at 2951.966 kb on + strand at 2951.966 kb on + strand at 2951.970 kb on + strand at 2951.970 kb on + strand at 2951.970 kb on + strand at 2951.970 kb on + strand at 2951.970 kb on + strand at 2951.970 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.972 kb on + strand at 2951.994 kb on + strand at 2952.014 kb on + strand at 2952.014 kb on + strand at 2952.014 kb on + strand at 2952.045 kb on + strand at 2952.048 kb on + strand at 2952.085 kb on + strand at 2953.102 kb on + strand, within PfGW456L13_2651 at 2953.102 kb on + strand, within PfGW456L13_2651 at 2953.102 kb on + strand, within PfGW456L13_2651 at 2953.496 kb on + strand, within PfGW456L13_2651 at 2953.496 kb on + strand, within PfGW456L13_2651 at 2953.496 kb on + strand, within PfGW456L13_2651 at 2953.630 kb on + strand, within PfGW456L13_2651 at 2953.825 kb on + strand, within PfGW456L13_2651 at 2953.825 kb on + strand, within PfGW456L13_2651 at 2954.149 kb on + strand, within PfGW456L13_2651 at 2954.149 kb on + strand, within PfGW456L13_2651 at 2954.149 kb on + strand, within PfGW456L13_2651 at 2954.149 kb on + strand, within PfGW456L13_2651 at 2954.149 kb on + strand, within PfGW456L13_2651 at 2955.220 kb on + strand at 2955.220 kb on + strand at 2955.220 kb on + strand at 2955.220 kb on + strand at 2955.220 kb on + strand at 2955.220 kb on + strand at 2955.220 kb on + strand at 2955.221 kb on - strand at 2955.231 kb on + strand at 2955.231 kb on + strand at 2955.232 kb on - strand at 2955.232 kb on - strand at 2955.309 kb on + strand at 2955.320 kb on - strand at 2955.327 kb on + strand at 2955.327 kb on + strand at 2955.327 kb on + strand at 2955.327 kb on + strand at 2955.329 kb on + strand at 2955.329 kb on + strand at 2955.329 kb on + strand at 2955.420 kb on + strand at 2955.427 kb on + strand at 2955.427 kb on + strand at 2955.427 kb on + strand at 2955.431 kb on - strand at 2955.444 kb on - strand at 2955.449 kb on + strand at 2955.449 kb on + strand at 2955.449 kb on + strand at 2955.450 kb on - strand at 2955.450 kb on - strand at 2955.450 kb on - strand at 2955.450 kb on - strand at 2955.450 kb on - strand at 2955.528 kb on - strand at 2955.528 kb on - strand at 2955.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,951,335 + PfGW456L13_2650 0.49 -1.5 2,951,336 - PfGW456L13_2650 0.49 -0.4 2,951,336 - PfGW456L13_2650 0.49 +0.6 2,951,470 + PfGW456L13_2650 0.63 -0.7 2,951,515 + PfGW456L13_2650 0.68 -0.8 2,951,515 + PfGW456L13_2650 0.68 -0.7 2,951,515 + PfGW456L13_2650 0.68 -0.5 2,951,516 - PfGW456L13_2650 0.68 -0.1 2,951,516 - PfGW456L13_2650 0.68 -0.2 2,951,516 - PfGW456L13_2650 0.68 -0.5 2,951,516 - PfGW456L13_2650 0.68 +0.0 2,951,581 + PfGW456L13_2650 0.74 -0.6 2,951,756 - -0.2 2,951,770 + +0.2 2,951,839 + -2.8 2,951,839 + -0.9 2,951,901 + -1.5 2,951,901 + -2.8 2,951,939 + -1.0 2,951,949 + -3.5 2,951,949 + -3.3 2,951,966 + -1.2 2,951,966 + -4.1 2,951,970 + -0.5 2,951,970 + -1.0 2,951,970 + +0.3 2,951,970 + -2.9 2,951,970 + -1.8 2,951,970 + -1.7 2,951,972 + -1.6 2,951,972 + -2.4 2,951,972 + -1.0 2,951,972 + +0.0 2,951,972 + -1.8 2,951,972 + -1.2 2,951,972 + -1.0 2,951,972 + -1.5 2,951,972 + -1.1 2,951,972 + -2.6 2,951,972 + -0.5 2,951,972 + -1.8 2,951,972 + -1.5 2,951,994 + -1.9 2,952,014 + -3.6 2,952,014 + +0.2 2,952,014 + -0.9 2,952,045 + -0.2 2,952,048 + -2.0 2,952,085 + -2.0 2,953,102 + PfGW456L13_2651 0.40 -1.0 2,953,102 + PfGW456L13_2651 0.40 -1.8 2,953,102 + PfGW456L13_2651 0.40 -1.2 2,953,496 + PfGW456L13_2651 0.57 -1.2 2,953,496 + PfGW456L13_2651 0.57 -1.4 2,953,496 + PfGW456L13_2651 0.57 -1.2 2,953,630 + PfGW456L13_2651 0.62 -0.2 2,953,825 + PfGW456L13_2651 0.70 -0.5 2,953,825 + PfGW456L13_2651 0.70 -2.2 2,954,149 + PfGW456L13_2651 0.84 -0.8 2,954,149 + PfGW456L13_2651 0.84 -1.2 2,954,149 + PfGW456L13_2651 0.84 -0.8 2,954,149 + PfGW456L13_2651 0.84 -2.4 2,954,149 + PfGW456L13_2651 0.84 -1.8 2,955,220 + +0.4 2,955,220 + -0.5 2,955,220 + +0.3 2,955,220 + +0.1 2,955,220 + +0.4 2,955,220 + -0.3 2,955,220 + +0.3 2,955,221 - -2.5 2,955,231 + -0.5 2,955,231 + +0.8 2,955,232 - -0.8 2,955,232 - +0.7 2,955,309 + -1.0 2,955,320 - +0.7 2,955,327 + -0.6 2,955,327 + +0.5 2,955,327 + -0.0 2,955,327 + +0.6 2,955,329 + -0.4 2,955,329 + +0.7 2,955,329 + -0.8 2,955,420 + +0.3 2,955,427 + +0.9 2,955,427 + -1.2 2,955,427 + -0.8 2,955,431 - -0.3 2,955,444 - +0.3 2,955,449 + -0.8 2,955,449 + -0.6 2,955,449 + -1.0 2,955,450 - +0.9 2,955,450 - +0.6 2,955,450 - +0.5 2,955,450 - +1.2 2,955,450 - +0.1 2,955,528 - +0.6 2,955,528 - -1.5 2,955,528 - -0.1
Or see this region's nucleotide sequence