Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2553 and PfGW456L13_2554 are separated by 250 nucleotides PfGW456L13_2554 and PfGW456L13_2555 are separated by 149 nucleotides PfGW456L13_2555 and PfGW456L13_2556 are separated by 235 nucleotides
PfGW456L13_2553 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 2,821,010 to 2,822,293
_2553
PfGW456L13_2554 - ATP-dependent protease La (EC 3.4.21.53) Type I, at 2,822,544 to 2,824,940
_2554
PfGW456L13_2555 - DNA-binding protein HU-beta, at 2,825,090 to 2,825,362
_2555
PfGW456L13_2556 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 2,825,598 to 2,827,469
_2556
Position (kb)
2822
2823
2824
2825 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2821.559 kb on + strand, within PfGW456L13_2553 at 2821.559 kb on + strand, within PfGW456L13_2553 at 2821.560 kb on - strand, within PfGW456L13_2553 at 2821.739 kb on - strand, within PfGW456L13_2553 at 2822.021 kb on + strand, within PfGW456L13_2553 at 2822.021 kb on + strand, within PfGW456L13_2553 at 2822.107 kb on + strand, within PfGW456L13_2553 at 2822.148 kb on + strand, within PfGW456L13_2553 at 2822.148 kb on + strand, within PfGW456L13_2553 at 2822.148 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.161 kb on + strand, within PfGW456L13_2553 at 2822.165 kb on + strand at 2822.165 kb on + strand at 2822.165 kb on + strand at 2822.165 kb on + strand at 2822.165 kb on + strand at 2822.166 kb on - strand at 2822.166 kb on - strand at 2822.166 kb on - strand at 2822.166 kb on - strand at 2822.166 kb on - strand at 2822.166 kb on - strand at 2822.199 kb on + strand at 2822.200 kb on - strand at 2822.200 kb on - strand at 2822.220 kb on + strand at 2822.221 kb on - strand at 2822.221 kb on - strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.243 kb on + strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.244 kb on - strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.245 kb on + strand at 2822.246 kb on - strand at 2822.249 kb on + strand at 2822.249 kb on + strand at 2822.249 kb on + strand at 2822.249 kb on + strand at 2822.250 kb on - strand at 2822.250 kb on - strand at 2822.291 kb on + strand at 2822.291 kb on + strand at 2822.291 kb on + strand at 2822.340 kb on - strand at 2822.423 kb on + strand at 2822.424 kb on - strand at 2822.452 kb on - strand at 2822.498 kb on + strand at 2822.498 kb on + strand at 2822.498 kb on + strand at 2822.498 kb on + strand at 2822.498 kb on + strand at 2822.498 kb on + strand at 2822.498 kb on + strand at 2822.499 kb on - strand at 2822.499 kb on - strand at 2822.499 kb on - strand at 2822.520 kb on + strand at 2822.532 kb on - strand at 2822.952 kb on + strand, within PfGW456L13_2554 at 2822.952 kb on + strand, within PfGW456L13_2554 at 2822.952 kb on + strand, within PfGW456L13_2554 at 2822.952 kb on + strand, within PfGW456L13_2554 at 2822.953 kb on - strand, within PfGW456L13_2554 at 2823.214 kb on - strand, within PfGW456L13_2554 at 2823.216 kb on + strand, within PfGW456L13_2554 at 2823.505 kb on - strand, within PfGW456L13_2554 at 2823.505 kb on - strand, within PfGW456L13_2554 at 2823.541 kb on - strand, within PfGW456L13_2554 at 2823.614 kb on + strand, within PfGW456L13_2554 at 2823.615 kb on - strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.723 kb on + strand at 2823.723 kb on + strand, within PfGW456L13_2554 at 2823.724 kb on - strand, within PfGW456L13_2554 at 2823.724 kb on - strand, within PfGW456L13_2554 at 2823.724 kb on - strand, within PfGW456L13_2554 at 2823.724 kb on - strand, within PfGW456L13_2554 at 2823.724 kb on - strand, within PfGW456L13_2554 at 2823.897 kb on + strand, within PfGW456L13_2554 at 2823.897 kb on + strand, within PfGW456L13_2554 at 2824.044 kb on + strand, within PfGW456L13_2554 at 2824.131 kb on + strand, within PfGW456L13_2554 at 2824.131 kb on + strand, within PfGW456L13_2554 at 2824.134 kb on + strand, within PfGW456L13_2554 at 2824.134 kb on + strand, within PfGW456L13_2554 at 2824.134 kb on + strand, within PfGW456L13_2554 at 2824.274 kb on + strand, within PfGW456L13_2554 at 2824.529 kb on + strand, within PfGW456L13_2554 at 2824.529 kb on + strand, within PfGW456L13_2554 at 2824.529 kb on + strand, within PfGW456L13_2554 at 2824.529 kb on + strand, within PfGW456L13_2554 at 2824.778 kb on + strand at 2824.778 kb on + strand at 2824.792 kb on + strand at 2824.792 kb on + strand at 2824.845 kb on + strand at 2824.928 kb on + strand at 2824.938 kb on + strand at 2824.941 kb on + strand at 2824.945 kb on + strand at 2824.945 kb on + strand at 2824.945 kb on + strand at 2824.977 kb on + strand at 2824.977 kb on + strand at 2824.989 kb on + strand at 2824.991 kb on + strand at 2825.003 kb on + strand at 2825.003 kb on + strand at 2825.074 kb on + strand at 2825.074 kb on + strand at 2825.074 kb on + strand at 2825.074 kb on + strand at 2825.076 kb on + strand at 2825.076 kb on + strand at 2825.076 kb on + strand at 2825.086 kb on + strand at 2825.360 kb on + strand at 2825.543 kb on + strand at 2825.543 kb on + strand at 2825.645 kb on + strand at 2825.645 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,821,559 + PfGW456L13_2553 0.43 -2.0 2,821,559 + PfGW456L13_2553 0.43 -2.0 2,821,560 - PfGW456L13_2553 0.43 -2.3 2,821,739 - PfGW456L13_2553 0.57 -3.5 2,822,021 + PfGW456L13_2553 0.79 -1.5 2,822,021 + PfGW456L13_2553 0.79 -2.6 2,822,107 + PfGW456L13_2553 0.85 -4.1 2,822,148 + PfGW456L13_2553 0.89 -3.0 2,822,148 + PfGW456L13_2553 0.89 -1.5 2,822,148 + PfGW456L13_2553 0.89 -1.6 2,822,161 + PfGW456L13_2553 0.90 -2.4 2,822,161 + PfGW456L13_2553 0.90 -3.5 2,822,161 + PfGW456L13_2553 0.90 -1.0 2,822,161 + PfGW456L13_2553 0.90 -2.6 2,822,161 + PfGW456L13_2553 0.90 -1.2 2,822,161 + PfGW456L13_2553 0.90 -1.3 2,822,161 + PfGW456L13_2553 0.90 -1.8 2,822,161 + PfGW456L13_2553 0.90 -3.1 2,822,165 + -2.5 2,822,165 + -3.4 2,822,165 + -1.9 2,822,165 + -1.5 2,822,165 + -2.0 2,822,166 - -1.2 2,822,166 - -3.3 2,822,166 - -2.3 2,822,166 - -2.3 2,822,166 - -1.4 2,822,166 - +0.8 2,822,199 + -1.7 2,822,200 - -2.5 2,822,200 - -2.0 2,822,220 + -0.8 2,822,221 - -2.2 2,822,221 - +0.8 2,822,243 + +0.0 2,822,243 + +1.0 2,822,243 + -0.7 2,822,243 + -1.2 2,822,243 + -0.5 2,822,243 + -1.4 2,822,243 + -0.8 2,822,243 + -0.5 2,822,243 + -1.1 2,822,243 + -1.9 2,822,243 + +1.7 2,822,243 + +0.1 2,822,243 + +0.4 2,822,243 + +0.2 2,822,243 + -1.6 2,822,243 + -0.1 2,822,243 + -0.2 2,822,243 + +0.4 2,822,243 + -0.7 2,822,243 + +0.8 2,822,244 - -1.9 2,822,244 - -2.2 2,822,244 - +0.2 2,822,244 - +0.8 2,822,244 - -1.7 2,822,244 - -2.3 2,822,244 - +0.7 2,822,244 - +0.3 2,822,244 - -2.2 2,822,244 - +1.5 2,822,244 - -2.2 2,822,245 + -1.0 2,822,245 + -0.5 2,822,245 + -0.3 2,822,245 + -2.3 2,822,245 + +0.0 2,822,245 + +0.1 2,822,245 + -0.7 2,822,245 + -0.5 2,822,246 - -1.2 2,822,249 + +0.6 2,822,249 + -1.4 2,822,249 + +0.4 2,822,249 + -0.1 2,822,250 - +1.1 2,822,250 - -1.6 2,822,291 + +0.6 2,822,291 + -0.3 2,822,291 + +1.6 2,822,340 - +0.4 2,822,423 + -0.2 2,822,424 - +1.0 2,822,452 - +1.1 2,822,498 + +0.8 2,822,498 + +0.0 2,822,498 + +0.8 2,822,498 + +0.8 2,822,498 + +1.2 2,822,498 + -1.6 2,822,498 + -0.9 2,822,499 - +1.4 2,822,499 - +2.0 2,822,499 - -1.2 2,822,520 + +0.4 2,822,532 - +0.4 2,822,952 + PfGW456L13_2554 0.17 +0.5 2,822,952 + PfGW456L13_2554 0.17 +1.8 2,822,952 + PfGW456L13_2554 0.17 +1.1 2,822,952 + PfGW456L13_2554 0.17 +1.5 2,822,953 - PfGW456L13_2554 0.17 +2.5 2,823,214 - PfGW456L13_2554 0.28 +1.0 2,823,216 + PfGW456L13_2554 0.28 +2.2 2,823,505 - PfGW456L13_2554 0.40 +0.7 2,823,505 - PfGW456L13_2554 0.40 +0.8 2,823,541 - PfGW456L13_2554 0.42 +2.0 2,823,614 + PfGW456L13_2554 0.45 -1.2 2,823,615 - PfGW456L13_2554 0.45 +1.0 2,823,723 + PfGW456L13_2554 0.49 -0.0 2,823,723 + PfGW456L13_2554 0.49 +0.7 2,823,723 + PfGW456L13_2554 0.49 +0.8 2,823,723 + PfGW456L13_2554 0.49 +0.8 2,823,723 + PfGW456L13_2554 0.49 +1.2 2,823,723 + PfGW456L13_2554 0.49 +2.1 2,823,723 + PfGW456L13_2554 0.49 +1.2 2,823,723 + PfGW456L13_2554 0.49 +2.5 2,823,723 + PfGW456L13_2554 0.49 +0.8 2,823,723 + +3.7 2,823,723 + PfGW456L13_2554 0.49 +0.5 2,823,724 - PfGW456L13_2554 0.49 +0.4 2,823,724 - PfGW456L13_2554 0.49 +1.9 2,823,724 - PfGW456L13_2554 0.49 +0.4 2,823,724 - PfGW456L13_2554 0.49 +2.4 2,823,724 - PfGW456L13_2554 0.49 -0.9 2,823,897 + PfGW456L13_2554 0.56 +1.8 2,823,897 + PfGW456L13_2554 0.56 +0.3 2,824,044 + PfGW456L13_2554 0.63 +1.4 2,824,131 + PfGW456L13_2554 0.66 +1.0 2,824,131 + PfGW456L13_2554 0.66 -0.9 2,824,134 + PfGW456L13_2554 0.66 +2.3 2,824,134 + PfGW456L13_2554 0.66 -0.7 2,824,134 + PfGW456L13_2554 0.66 -0.4 2,824,274 + PfGW456L13_2554 0.72 +2.6 2,824,529 + PfGW456L13_2554 0.83 +1.1 2,824,529 + PfGW456L13_2554 0.83 -0.3 2,824,529 + PfGW456L13_2554 0.83 +1.0 2,824,529 + PfGW456L13_2554 0.83 +1.0 2,824,778 + +0.1 2,824,778 + -2.0 2,824,792 + -0.2 2,824,792 + -0.2 2,824,845 + +0.4 2,824,928 + -0.4 2,824,938 + -1.5 2,824,941 + -0.0 2,824,945 + +0.5 2,824,945 + -0.7 2,824,945 + +0.5 2,824,977 + +0.4 2,824,977 + +1.6 2,824,989 + +0.1 2,824,991 + +1.1 2,825,003 + +0.2 2,825,003 + -0.6 2,825,074 + +0.3 2,825,074 + -0.7 2,825,074 + -1.0 2,825,074 + -2.2 2,825,076 + -0.9 2,825,076 + +0.4 2,825,076 + -1.5 2,825,086 + -0.5 2,825,360 + +0.5 2,825,543 + -0.5 2,825,543 + +0.8 2,825,645 + +0.1 2,825,645 + -0.9
Or see this region's nucleotide sequence