Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2534 and PfGW456L13_2535 are separated by 9 nucleotides PfGW456L13_2535 and PfGW456L13_2536 are separated by 10 nucleotides
PfGW456L13_2534 - Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), at 2,801,711 to 2,802,778
_2534
PfGW456L13_2535 - Enoyl-CoA hydratase (EC 4.2.1.17), at 2,802,788 to 2,803,543
_2535
PfGW456L13_2536 - Butyryl-CoA dehydrogenase (EC 1.3.99.2), at 2,803,554 to 2,804,720
_2536
Position (kb)
2802
2803
2804 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2801.939 kb on + strand, within PfGW456L13_2534 at 2801.939 kb on + strand, within PfGW456L13_2534 at 2801.940 kb on - strand, within PfGW456L13_2534 at 2801.940 kb on - strand, within PfGW456L13_2534 at 2801.940 kb on - strand, within PfGW456L13_2534 at 2801.940 kb on - strand, within PfGW456L13_2534 at 2801.940 kb on - strand, within PfGW456L13_2534 at 2801.940 kb on - strand at 2802.002 kb on + strand, within PfGW456L13_2534 at 2802.002 kb on + strand, within PfGW456L13_2534 at 2802.296 kb on - strand, within PfGW456L13_2534 at 2802.776 kb on + strand at 2802.800 kb on - strand at 2803.031 kb on + strand, within PfGW456L13_2535 at 2803.032 kb on - strand, within PfGW456L13_2535 at 2803.032 kb on - strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.247 kb on + strand, within PfGW456L13_2535 at 2803.248 kb on - strand, within PfGW456L13_2535 at 2803.248 kb on - strand, within PfGW456L13_2535 at 2803.248 kb on - strand, within PfGW456L13_2535 at 2803.248 kb on - strand, within PfGW456L13_2535 at 2803.248 kb on - strand, within PfGW456L13_2535 at 2803.248 kb on - strand, within PfGW456L13_2535 at 2803.440 kb on - strand, within PfGW456L13_2535 at 2803.550 kb on - strand at 2803.566 kb on + strand at 2803.566 kb on + strand at 2803.566 kb on + strand at 2803.566 kb on + strand at 2803.566 kb on + strand at 2803.566 kb on + strand at 2803.567 kb on - strand at 2803.567 kb on - strand at 2803.567 kb on - strand at 2803.567 kb on - strand at 2803.624 kb on + strand at 2803.788 kb on + strand, within PfGW456L13_2536 at 2803.788 kb on + strand, within PfGW456L13_2536 at 2803.788 kb on + strand, within PfGW456L13_2536 at 2803.788 kb on + strand, within PfGW456L13_2536 at 2803.788 kb on + strand, within PfGW456L13_2536 at 2803.789 kb on - strand at 2803.789 kb on - strand, within PfGW456L13_2536 at 2803.789 kb on - strand, within PfGW456L13_2536 at 2803.789 kb on - strand, within PfGW456L13_2536 at 2803.789 kb on - strand, within PfGW456L13_2536 at 2803.789 kb on - strand, within PfGW456L13_2536 at 2803.789 kb on - strand, within PfGW456L13_2536 at 2804.001 kb on + strand, within PfGW456L13_2536 at 2804.001 kb on + strand, within PfGW456L13_2536 at 2804.001 kb on + strand, within PfGW456L13_2536 at 2804.001 kb on + strand, within PfGW456L13_2536 at 2804.346 kb on + strand, within PfGW456L13_2536 at 2804.346 kb on + strand, within PfGW456L13_2536 at 2804.347 kb on - strand, within PfGW456L13_2536 at 2804.427 kb on + strand, within PfGW456L13_2536 at 2804.442 kb on + strand, within PfGW456L13_2536 at 2804.442 kb on + strand, within PfGW456L13_2536 at 2804.442 kb on + strand, within PfGW456L13_2536 at 2804.443 kb on - strand, within PfGW456L13_2536 at 2804.443 kb on - strand, within PfGW456L13_2536 at 2804.443 kb on - strand, within PfGW456L13_2536 at 2804.443 kb on - strand, within PfGW456L13_2536
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,801,939 + PfGW456L13_2534 0.21 -0.8 2,801,939 + PfGW456L13_2534 0.21 -0.4 2,801,940 - PfGW456L13_2534 0.21 +1.0 2,801,940 - PfGW456L13_2534 0.21 -0.3 2,801,940 - PfGW456L13_2534 0.21 +0.3 2,801,940 - PfGW456L13_2534 0.21 -0.4 2,801,940 - PfGW456L13_2534 0.21 -0.2 2,801,940 - -0.2 2,802,002 + PfGW456L13_2534 0.27 +0.8 2,802,002 + PfGW456L13_2534 0.27 +0.8 2,802,296 - PfGW456L13_2534 0.55 -0.4 2,802,776 + +0.0 2,802,800 - -0.1 2,803,031 + PfGW456L13_2535 0.32 -1.0 2,803,032 - PfGW456L13_2535 0.32 +0.4 2,803,032 - PfGW456L13_2535 0.32 -0.6 2,803,247 + PfGW456L13_2535 0.61 -1.4 2,803,247 + PfGW456L13_2535 0.61 +0.0 2,803,247 + PfGW456L13_2535 0.61 +0.6 2,803,247 + PfGW456L13_2535 0.61 +0.6 2,803,247 + PfGW456L13_2535 0.61 +0.9 2,803,247 + PfGW456L13_2535 0.61 +1.5 2,803,247 + PfGW456L13_2535 0.61 -0.7 2,803,247 + PfGW456L13_2535 0.61 +0.4 2,803,248 - PfGW456L13_2535 0.61 -0.5 2,803,248 - PfGW456L13_2535 0.61 -1.2 2,803,248 - PfGW456L13_2535 0.61 -1.1 2,803,248 - PfGW456L13_2535 0.61 -1.1 2,803,248 - PfGW456L13_2535 0.61 -0.6 2,803,248 - PfGW456L13_2535 0.61 +0.7 2,803,440 - PfGW456L13_2535 0.86 +0.0 2,803,550 - -0.7 2,803,566 + +0.1 2,803,566 + -1.0 2,803,566 + +0.6 2,803,566 + -0.4 2,803,566 + -1.4 2,803,566 + +0.7 2,803,567 - -1.7 2,803,567 - +1.2 2,803,567 - -3.2 2,803,567 - -1.1 2,803,624 + -3.0 2,803,788 + PfGW456L13_2536 0.20 -0.2 2,803,788 + PfGW456L13_2536 0.20 -0.2 2,803,788 + PfGW456L13_2536 0.20 +0.3 2,803,788 + PfGW456L13_2536 0.20 +0.4 2,803,788 + PfGW456L13_2536 0.20 +0.3 2,803,789 - +0.9 2,803,789 - PfGW456L13_2536 0.20 +0.9 2,803,789 - PfGW456L13_2536 0.20 +0.7 2,803,789 - PfGW456L13_2536 0.20 -0.9 2,803,789 - PfGW456L13_2536 0.20 +0.1 2,803,789 - PfGW456L13_2536 0.20 +0.1 2,803,789 - PfGW456L13_2536 0.20 -0.1 2,804,001 + PfGW456L13_2536 0.38 +0.0 2,804,001 + PfGW456L13_2536 0.38 -0.4 2,804,001 + PfGW456L13_2536 0.38 +0.9 2,804,001 + PfGW456L13_2536 0.38 +0.2 2,804,346 + PfGW456L13_2536 0.68 -1.0 2,804,346 + PfGW456L13_2536 0.68 +0.5 2,804,347 - PfGW456L13_2536 0.68 +0.1 2,804,427 + PfGW456L13_2536 0.75 -0.6 2,804,442 + PfGW456L13_2536 0.76 +0.5 2,804,442 + PfGW456L13_2536 0.76 -0.4 2,804,442 + PfGW456L13_2536 0.76 +0.0 2,804,443 - PfGW456L13_2536 0.76 +0.1 2,804,443 - PfGW456L13_2536 0.76 +0.3 2,804,443 - PfGW456L13_2536 0.76 +0.1 2,804,443 - PfGW456L13_2536 0.76 +0.4
Or see this region's nucleotide sequence