Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2423 and PfGW456L13_2424 are separated by 34 nucleotides PfGW456L13_2424 and PfGW456L13_2425 overlap by 14 nucleotides PfGW456L13_2425 and PfGW456L13_2426 are separated by 8 nucleotides
PfGW456L13_2423 - Phenylacetate-CoA oxygenase/reductase, PaaK subunit, at 2,688,053 to 2,689,129
_2423
PfGW456L13_2424 - Phenylacetate-CoA oxygenase, PaaJ subunit, at 2,689,164 to 2,689,697
_2424
PfGW456L13_2425 - Phenylacetate-CoA oxygenase, PaaI subunit, at 2,689,684 to 2,690,445
_2425
PfGW456L13_2426 - Phenylacetate-CoA oxygenase, PaaH subunit, at 2,690,454 to 2,690,735
_2426
Position (kb)
2689
2690 Strain fitness (log2 ratio)
-2
-1
0
1 at 2688.567 kb on + strand, within PfGW456L13_2423 at 2688.627 kb on + strand, within PfGW456L13_2423 at 2688.628 kb on - strand, within PfGW456L13_2423 at 2688.690 kb on + strand, within PfGW456L13_2423 at 2688.690 kb on + strand, within PfGW456L13_2423 at 2688.690 kb on + strand, within PfGW456L13_2423 at 2688.786 kb on + strand, within PfGW456L13_2423 at 2688.786 kb on + strand, within PfGW456L13_2423 at 2688.786 kb on + strand, within PfGW456L13_2423 at 2688.786 kb on + strand, within PfGW456L13_2423 at 2688.787 kb on - strand, within PfGW456L13_2423 at 2688.787 kb on - strand, within PfGW456L13_2423 at 2688.904 kb on + strand, within PfGW456L13_2423 at 2688.971 kb on + strand, within PfGW456L13_2423 at 2689.505 kb on - strand, within PfGW456L13_2424 at 2689.505 kb on - strand, within PfGW456L13_2424 at 2689.744 kb on + strand at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.787 kb on + strand, within PfGW456L13_2425 at 2689.788 kb on - strand, within PfGW456L13_2425 at 2689.788 kb on - strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.039 kb on + strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.040 kb on - strand, within PfGW456L13_2425 at 2690.136 kb on - strand, within PfGW456L13_2425 at 2690.417 kb on + strand at 2690.418 kb on - strand at 2690.439 kb on + strand at 2690.440 kb on - strand at 2690.504 kb on - strand, within PfGW456L13_2426 at 2690.614 kb on + strand, within PfGW456L13_2426 at 2690.615 kb on - strand, within PfGW456L13_2426 at 2690.615 kb on - strand, within PfGW456L13_2426
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,688,567 + PfGW456L13_2423 0.48 -0.9 2,688,627 + PfGW456L13_2423 0.53 +1.7 2,688,628 - PfGW456L13_2423 0.53 -2.1 2,688,690 + PfGW456L13_2423 0.59 -0.7 2,688,690 + PfGW456L13_2423 0.59 -1.5 2,688,690 + PfGW456L13_2423 0.59 -0.9 2,688,786 + PfGW456L13_2423 0.68 -0.4 2,688,786 + PfGW456L13_2423 0.68 -1.5 2,688,786 + PfGW456L13_2423 0.68 -0.4 2,688,786 + PfGW456L13_2423 0.68 -0.1 2,688,787 - PfGW456L13_2423 0.68 -1.2 2,688,787 - PfGW456L13_2423 0.68 -0.9 2,688,904 + PfGW456L13_2423 0.79 +0.1 2,688,971 + PfGW456L13_2423 0.85 -1.1 2,689,505 - PfGW456L13_2424 0.64 -2.1 2,689,505 - PfGW456L13_2424 0.64 -1.5 2,689,744 + -0.5 2,689,787 + PfGW456L13_2425 0.14 -0.5 2,689,787 + PfGW456L13_2425 0.14 -0.4 2,689,787 + PfGW456L13_2425 0.14 -0.1 2,689,787 + PfGW456L13_2425 0.14 -0.7 2,689,788 - PfGW456L13_2425 0.14 -0.9 2,689,788 - PfGW456L13_2425 0.14 -1.9 2,690,039 + PfGW456L13_2425 0.47 +0.4 2,690,039 + PfGW456L13_2425 0.47 -0.3 2,690,039 + PfGW456L13_2425 0.47 -0.2 2,690,039 + PfGW456L13_2425 0.47 -0.1 2,690,039 + PfGW456L13_2425 0.47 -0.3 2,690,039 + PfGW456L13_2425 0.47 +0.1 2,690,040 - PfGW456L13_2425 0.47 -0.6 2,690,040 - PfGW456L13_2425 0.47 -0.6 2,690,040 - PfGW456L13_2425 0.47 -1.2 2,690,040 - PfGW456L13_2425 0.47 -0.9 2,690,040 - PfGW456L13_2425 0.47 -0.1 2,690,040 - PfGW456L13_2425 0.47 -2.5 2,690,136 - PfGW456L13_2425 0.59 +0.1 2,690,417 + +0.5 2,690,418 - -1.2 2,690,439 + -1.3 2,690,440 - -0.7 2,690,504 - PfGW456L13_2426 0.18 -1.7 2,690,614 + PfGW456L13_2426 0.57 +0.2 2,690,615 - PfGW456L13_2426 0.57 -1.4 2,690,615 - PfGW456L13_2426 0.57 -1.4
Or see this region's nucleotide sequence