Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2183 and PfGW456L13_2184 overlap by 14 nucleotides PfGW456L13_2184 and PfGW456L13_2185 overlap by 13 nucleotides
PfGW456L13_2183 - WzxE protein, at 2,393,563 to 2,394,822
_2183
PfGW456L13_2184 - putative polysaccharide polymerase, at 2,394,809 to 2,395,981
_2184
PfGW456L13_2185 - putative colanic acid biosynthesis glycosyl transferase, at 2,395,969 to 2,397,183
_2185
Position (kb)
2394
2395
2396 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2394.752 kb on + strand at 2394.753 kb on - strand at 2394.756 kb on - strand at 2394.792 kb on - strand at 2394.804 kb on + strand at 2394.828 kb on + strand at 2394.830 kb on + strand at 2394.831 kb on - strand at 2394.980 kb on + strand, within PfGW456L13_2184 at 2395.061 kb on - strand, within PfGW456L13_2184 at 2395.063 kb on - strand, within PfGW456L13_2184 at 2395.095 kb on + strand, within PfGW456L13_2184 at 2395.240 kb on + strand, within PfGW456L13_2184 at 2395.339 kb on - strand, within PfGW456L13_2184 at 2395.428 kb on - strand, within PfGW456L13_2184 at 2395.431 kb on + strand, within PfGW456L13_2184 at 2395.432 kb on - strand, within PfGW456L13_2184 at 2395.582 kb on + strand, within PfGW456L13_2184 at 2395.582 kb on + strand, within PfGW456L13_2184 at 2395.583 kb on - strand, within PfGW456L13_2184 at 2395.584 kb on + strand, within PfGW456L13_2184 at 2395.585 kb on - strand, within PfGW456L13_2184 at 2395.778 kb on + strand, within PfGW456L13_2184 at 2395.779 kb on - strand, within PfGW456L13_2184 at 2395.788 kb on - strand, within PfGW456L13_2184 at 2395.878 kb on - strand at 2395.878 kb on - strand at 2395.937 kb on - strand at 2396.066 kb on - strand at 2396.088 kb on + strand at 2396.088 kb on + strand at 2396.195 kb on - strand, within PfGW456L13_2185 at 2396.199 kb on + strand, within PfGW456L13_2185 at 2396.200 kb on - strand, within PfGW456L13_2185 at 2396.291 kb on + strand, within PfGW456L13_2185 at 2396.302 kb on - strand, within PfGW456L13_2185 at 2396.350 kb on + strand, within PfGW456L13_2185 at 2396.698 kb on - strand, within PfGW456L13_2185 at 2396.827 kb on + strand, within PfGW456L13_2185 at 2396.828 kb on - strand, within PfGW456L13_2185 at 2396.855 kb on + strand, within PfGW456L13_2185
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 2,394,752 + +0.1 2,394,753 - -0.2 2,394,756 - -3.3 2,394,792 - -2.3 2,394,804 + -1.3 2,394,828 + -0.5 2,394,830 + -3.1 2,394,831 - -1.3 2,394,980 + PfGW456L13_2184 0.15 -0.8 2,395,061 - PfGW456L13_2184 0.21 +0.2 2,395,063 - PfGW456L13_2184 0.22 +1.0 2,395,095 + PfGW456L13_2184 0.24 +0.8 2,395,240 + PfGW456L13_2184 0.37 +1.0 2,395,339 - PfGW456L13_2184 0.45 -1.6 2,395,428 - PfGW456L13_2184 0.53 -2.2 2,395,431 + PfGW456L13_2184 0.53 -1.3 2,395,432 - PfGW456L13_2184 0.53 -3.5 2,395,582 + PfGW456L13_2184 0.66 -1.2 2,395,582 + PfGW456L13_2184 0.66 -0.2 2,395,583 - PfGW456L13_2184 0.66 -0.8 2,395,584 + PfGW456L13_2184 0.66 -2.5 2,395,585 - PfGW456L13_2184 0.66 -1.6 2,395,778 + PfGW456L13_2184 0.83 -0.6 2,395,779 - PfGW456L13_2184 0.83 -0.1 2,395,788 - PfGW456L13_2184 0.83 -1.5 2,395,878 - -2.9 2,395,878 - -0.2 2,395,937 - -1.1 2,396,066 - -2.5 2,396,088 + -0.7 2,396,088 + +0.3 2,396,195 - PfGW456L13_2185 0.19 -1.8 2,396,199 + PfGW456L13_2185 0.19 +0.7 2,396,200 - PfGW456L13_2185 0.19 -2.0 2,396,291 + PfGW456L13_2185 0.27 +0.9 2,396,302 - PfGW456L13_2185 0.27 -1.0 2,396,350 + PfGW456L13_2185 0.31 +0.9 2,396,698 - PfGW456L13_2185 0.60 -2.2 2,396,827 + PfGW456L13_2185 0.71 +2.1 2,396,828 - PfGW456L13_2185 0.71 -0.2 2,396,855 + PfGW456L13_2185 0.73 +0.6
Or see this region's nucleotide sequence