Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2029

Experiment: L-Phenylalanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine (C)
2,228,901	+		PfGW456L13_2028	0.22	-0.9
2,228,901	+		PfGW456L13_2028	0.22	-0.4
2,228,901	+		PfGW456L13_2028	0.22	-0.0
2,228,901	+		PfGW456L13_2028	0.22	-0.0
2,228,902	-		PfGW456L13_2028	0.22	-1.9
2,228,902	-		PfGW456L13_2028	0.22	+0.6
2,228,919	+		PfGW456L13_2028	0.23	-0.0
2,229,117	+		PfGW456L13_2028	0.43	-1.7
2,229,162	+		PfGW456L13_2028	0.48	-0.8
2,229,162	+		PfGW456L13_2028	0.48	+0.8
2,229,162	+		PfGW456L13_2028	0.48	+1.1
2,229,162	+		PfGW456L13_2028	0.48	+0.5
2,229,310	-		PfGW456L13_2028	0.63	+0.1
2,229,351	-		PfGW456L13_2028	0.67	+0.2
2,229,445	-		PfGW456L13_2028	0.76	-1.2
2,229,445	-		PfGW456L13_2028	0.76	-0.2
2,229,547	-		PfGW456L13_2028	0.87	-1.1
2,229,649	-				+0.4
2,229,649	-				+0.5
2,229,649	-				+0.2
2,229,673	+				+0.0
2,229,673	+				-0.6
2,229,674	-				-1.7
2,229,741	+				+0.3
2,229,917	+				-2.2
2,229,917	+				-2.1
2,230,450	+		PfGW456L13_2029	0.25	-2.3
2,230,450	+		PfGW456L13_2029	0.25	-1.1
2,230,451	-		PfGW456L13_2029	0.25	-0.8
2,230,451	-		PfGW456L13_2029	0.25	+0.5
2,230,451	-		PfGW456L13_2029	0.25	-1.3
2,230,570	-		PfGW456L13_2029	0.29	-2.2
2,230,570	-		PfGW456L13_2029	0.29	-2.0
2,230,570	-		PfGW456L13_2029	0.29	-1.6
2,230,570	-		PfGW456L13_2029	0.29	-1.5
2,230,854	+		PfGW456L13_2029	0.39	-0.3
2,230,854	+		PfGW456L13_2029	0.39	-2.9
2,231,170	+		PfGW456L13_2029	0.51	-1.8
2,231,170	+		PfGW456L13_2029	0.51	-1.8
2,231,170	+		PfGW456L13_2029	0.51	-3.6
2,231,170	+		PfGW456L13_2029	0.51	-2.3
2,231,170	+		PfGW456L13_2029	0.51	+0.0
2,231,170	+		PfGW456L13_2029	0.51	-1.9
2,231,170	+		PfGW456L13_2029	0.51	-1.4
2,231,170	+		PfGW456L13_2029	0.51	-1.7
2,231,171	-		PfGW456L13_2029	0.51	-0.6
2,231,171	-		PfGW456L13_2029	0.51	-0.6
2,231,171	-		PfGW456L13_2029	0.51	-0.4
2,231,171	-		PfGW456L13_2029	0.51	-1.0
2,231,171	-		PfGW456L13_2029	0.51	-2.8
2,231,369	+		PfGW456L13_2029	0.58	-1.6
2,231,369	+		PfGW456L13_2029	0.58	-2.1
2,231,437	+		PfGW456L13_2029	0.60	-0.7
2,231,437	+		PfGW456L13_2029	0.60	-1.3
2,231,438	-		PfGW456L13_2029	0.60	-0.5
2,231,438	-		PfGW456L13_2029	0.60	-1.4
2,231,463	+		PfGW456L13_2029	0.61	-0.7
2,231,464	-		PfGW456L13_2029	0.61	-0.4
2,231,464	-		PfGW456L13_2029	0.61	-0.8
2,231,464	-		PfGW456L13_2029	0.61	-0.9
2,231,464	-		PfGW456L13_2029	0.61	-2.4
2,231,527	+		PfGW456L13_2029	0.64	-4.4
2,231,527	+		PfGW456L13_2029	0.64	-1.3
2,231,527	+		PfGW456L13_2029	0.64	-2.3
2,231,527	+		PfGW456L13_2029	0.64	-0.3
2,231,528	-		PfGW456L13_2029	0.64	-1.8
2,231,528	-		PfGW456L13_2029	0.64	-0.6
2,231,528	-		PfGW456L13_2029	0.64	-1.7
2,231,528	-		PfGW456L13_2029	0.64	-2.2
2,231,528	-		PfGW456L13_2029	0.64	-1.8
2,231,528	-		PfGW456L13_2029	0.64	-3.0
2,231,528	-		PfGW456L13_2029	0.64	-1.8
2,231,528	-		PfGW456L13_2029	0.64	-3.1
2,231,528	-		PfGW456L13_2029	0.64	-3.1
2,231,530	+		PfGW456L13_2029	0.64	-1.6
2,231,530	+		PfGW456L13_2029	0.64	-2.3
2,231,530	+		PfGW456L13_2029	0.64	-2.1
2,231,531	-		PfGW456L13_2029	0.64	-2.7
2,231,531	-		PfGW456L13_2029	0.64	-1.3
2,231,531	-		PfGW456L13_2029	0.64	-1.6
2,231,531	-		PfGW456L13_2029	0.64	-2.0
2,231,531	-		PfGW456L13_2029	0.64	-1.6
2,231,531	-		PfGW456L13_2029	0.64	-1.8
2,231,531	-		PfGW456L13_2029	0.64	-0.8
2,231,531	-		PfGW456L13_2029	0.64	-1.0
2,231,564	+		PfGW456L13_2029	0.65	-1.0
2,231,565	-		PfGW456L13_2029	0.65	+0.2
2,231,986	+		PfGW456L13_2029	0.80	-0.6
2,231,986	+		PfGW456L13_2029	0.80	-0.6
2,231,986	+		PfGW456L13_2029	0.80	-1.8
2,231,986	+		PfGW456L13_2029	0.80	-1.2
2,231,986	+		PfGW456L13_2029	0.80	-0.3
2,231,986	+		PfGW456L13_2029	0.80	-2.4
2,231,986	+		PfGW456L13_2029	0.80	-1.7
2,231,987	-		PfGW456L13_2029	0.80	-3.7
2,231,987	-		PfGW456L13_2029	0.80	-2.7
2,231,987	-		PfGW456L13_2029	0.80	-0.8
2,231,987	-		PfGW456L13_2029	0.80	-1.9
2,231,987	-		PfGW456L13_2029	0.80	-0.4
2,231,987	-		PfGW456L13_2029	0.80	-1.3
2,232,004	+		PfGW456L13_2029	0.81	-2.0
2,232,055	-		PfGW456L13_2029	0.83	-1.3
2,232,438	+				-2.0
2,232,438	+				-1.4
2,232,438	+				-2.1
2,232,439	-				+1.4
2,232,443	+				-0.4
2,232,443	+				-3.5
2,232,443	+				+0.2
2,232,553	+				-0.3
2,232,553	+				-0.4
2,232,553	+				+1.0
2,232,553	+				-0.1
2,232,553	+				-0.6
2,232,553	+				-0.3
2,232,554	-				-0.0
2,232,554	-				+0.5
2,232,554	-				-0.4
2,232,556	-				-2.8
2,232,556	-				+0.7
2,232,556	-				+0.5
2,232,597	-				-0.7
2,232,597	-				-0.1
2,232,597	-				-0.7
2,232,624	-				-0.3
2,232,740	-				+1.0
2,232,810	+				+0.0
2,232,810	+				+0.0
2,232,810	+				+0.7
2,232,810	+				-1.8
2,232,921	-		PfGW456L13_2030	0.25	+0.3
2,233,057	-		PfGW456L13_2030	0.43	+0.6
2,233,057	-		PfGW456L13_2030	0.43	-0.6
2,233,057	-		PfGW456L13_2030	0.43	-0.8
2,233,282	+		PfGW456L13_2030	0.75	+0.2
2,233,282	+		PfGW456L13_2030	0.75	+0.3
2,233,282	+		PfGW456L13_2030	0.75	+0.3
2,233,283	-		PfGW456L13_2030	0.75	+0.3
2,233,283	-		PfGW456L13_2030	0.75	-0.6
2,233,283	-		PfGW456L13_2030	0.75	-0.0
2,233,283	-		PfGW456L13_2030	0.75	-1.2
2,233,283	-		PfGW456L13_2030	0.75	+0.1
2,233,302	+		PfGW456L13_2030	0.78	-0.3
2,233,303	-		PfGW456L13_2030	0.78	+0.1
2,233,416	-				-0.2
2,233,434	+				+0.6
2,233,435	-				-0.5
2,233,435	-				+0.9
2,233,461	+				+0.5
2,233,461	+				+0.3
2,233,461	+				+0.3
2,233,461	+				+0.5
2,233,461	+				+0.7
2,233,461	+				+0.4
2,233,461	+				-1.5
2,233,461	+				-1.2
2,233,461	+				-0.1
2,233,461	+				+0.7
2,233,461	+				+1.0
2,233,461	+				+0.1
2,233,461	+				+0.4
2,233,461	+				+0.4
2,233,461	+				-1.4
2,233,461	+				-0.8
2,233,461	+				-0.0
2,233,461	+				+0.5
2,233,461	+				+0.2
2,233,462	-				+1.1
2,233,462	-				+1.4
2,233,462	-				+0.3
2,233,462	-				-0.3
2,233,462	-				+0.0
2,233,462	-				-0.9
2,233,462	-				-0.5
2,233,462	-				+0.0
2,233,462	-				-1.3
2,233,462	-				-0.1
2,233,505	+				-0.3
2,233,505	+				+0.0
2,233,506	-				+1.0