Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4061 and Echvi_4062 are separated by 142 nucleotides Echvi_4062 and Echvi_4063 are separated by 718 nucleotides
Echvi_4061: Echvi_4061 - histidyl-tRNA synthetase, at 4,869,100 to 4,870,473
_4061
Echvi_4062: Echvi_4062 - hypothetical protein, at 4,870,616 to 4,870,825
_4062
Echvi_4063: Echvi_4063 - GTP-binding protein TypA/BipA, at 4,871,544 to 4,873,349
_4063
Position (kb)
4870
4871 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4870.505 kb on - strand at 4870.602 kb on + strand at 4870.625 kb on + strand at 4870.663 kb on + strand, within Echvi_4062 at 4870.676 kb on - strand, within Echvi_4062 at 4870.736 kb on + strand, within Echvi_4062 at 4870.736 kb on + strand, within Echvi_4062 at 4870.737 kb on - strand, within Echvi_4062 at 4870.737 kb on - strand, within Echvi_4062 at 4870.763 kb on - strand, within Echvi_4062 at 4870.829 kb on + strand at 4870.829 kb on + strand at 4870.829 kb on + strand at 4870.829 kb on + strand at 4870.830 kb on - strand at 4870.839 kb on + strand at 4870.868 kb on + strand at 4870.977 kb on + strand at 4871.001 kb on + strand at 4871.021 kb on + strand at 4871.022 kb on - strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.025 kb on + strand at 4871.027 kb on + strand at 4871.027 kb on + strand at 4871.037 kb on - strand at 4871.037 kb on - strand at 4871.065 kb on + strand at 4871.066 kb on - strand at 4871.072 kb on + strand at 4871.110 kb on - strand at 4871.115 kb on + strand at 4871.116 kb on - strand at 4871.116 kb on - strand at 4871.137 kb on + strand at 4871.137 kb on + strand at 4871.137 kb on + strand at 4871.137 kb on + strand at 4871.137 kb on + strand at 4871.138 kb on - strand at 4871.138 kb on - strand at 4871.138 kb on - strand at 4871.138 kb on - strand at 4871.138 kb on - strand at 4871.148 kb on - strand at 4871.158 kb on + strand at 4871.171 kb on + strand at 4871.172 kb on - strand at 4871.172 kb on - strand at 4871.177 kb on + strand at 4871.181 kb on + strand at 4871.181 kb on + strand at 4871.182 kb on - strand at 4871.182 kb on - strand at 4871.182 kb on - strand at 4871.182 kb on - strand at 4871.219 kb on + strand at 4871.220 kb on - strand at 4871.261 kb on + strand at 4871.287 kb on + strand at 4871.304 kb on + strand at 4871.305 kb on - strand at 4871.305 kb on - strand at 4871.317 kb on - strand at 4871.325 kb on + strand at 4871.325 kb on + strand at 4871.326 kb on - strand at 4871.335 kb on + strand at 4871.350 kb on - strand at 4871.354 kb on + strand at 4871.354 kb on + strand at 4871.358 kb on + strand at 4871.359 kb on - strand at 4871.359 kb on - strand at 4871.390 kb on + strand at 4871.391 kb on - strand at 4871.406 kb on + strand at 4871.446 kb on - strand at 4871.474 kb on + strand at 4871.475 kb on - strand at 4871.516 kb on + strand at 4871.529 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,870,505 - -0.6 4,870,602 + +0.7 4,870,625 + -0.2 4,870,663 + Echvi_4062 0.22 -0.2 4,870,676 - Echvi_4062 0.29 -0.1 4,870,736 + Echvi_4062 0.57 -0.9 4,870,736 + Echvi_4062 0.57 -3.4 4,870,737 - Echvi_4062 0.58 -0.1 4,870,737 - Echvi_4062 0.58 -0.2 4,870,763 - Echvi_4062 0.70 -1.8 4,870,829 + -1.6 4,870,829 + -1.1 4,870,829 + +1.0 4,870,829 + +0.3 4,870,830 - -1.6 4,870,839 + +0.5 4,870,868 + -1.6 4,870,977 + -1.6 4,871,001 + -0.7 4,871,021 + -1.3 4,871,022 - +0.0 4,871,025 + +0.3 4,871,025 + -0.0 4,871,025 + +0.6 4,871,025 + -1.5 4,871,025 + +0.0 4,871,025 + +0.1 4,871,025 + -0.3 4,871,025 + +0.4 4,871,025 + -0.4 4,871,025 + +0.9 4,871,027 + +0.7 4,871,027 + -1.5 4,871,037 - -2.5 4,871,037 - -0.9 4,871,065 + +1.0 4,871,066 - -1.5 4,871,072 + -0.0 4,871,110 - +0.7 4,871,115 + -3.3 4,871,116 - -0.6 4,871,116 - -1.6 4,871,137 + -0.6 4,871,137 + -1.8 4,871,137 + +1.0 4,871,137 + +0.1 4,871,137 + +1.0 4,871,138 - -0.1 4,871,138 - +0.2 4,871,138 - +0.1 4,871,138 - +1.4 4,871,138 - -2.1 4,871,148 - +1.0 4,871,158 + +0.7 4,871,171 + -0.5 4,871,172 - +0.1 4,871,172 - +1.4 4,871,177 + -1.1 4,871,181 + -0.2 4,871,181 + -0.6 4,871,182 - -0.2 4,871,182 - -0.0 4,871,182 - -0.4 4,871,182 - -2.3 4,871,219 + +0.2 4,871,220 - +0.1 4,871,261 + +0.7 4,871,287 + -2.1 4,871,304 + +0.1 4,871,305 - +0.9 4,871,305 - -1.1 4,871,317 - +0.6 4,871,325 + +1.0 4,871,325 + +1.5 4,871,326 - +1.1 4,871,335 + -0.8 4,871,350 - -1.1 4,871,354 + -0.5 4,871,354 + -1.4 4,871,358 + +0.3 4,871,359 - +0.9 4,871,359 - -0.2 4,871,390 + +0.7 4,871,391 - -2.5 4,871,406 + -0.1 4,871,446 - -0.1 4,871,474 + +0.4 4,871,475 - +0.0 4,871,516 + +0.1 4,871,529 + -0.7
Or see this region's nucleotide sequence