Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2391 and Echvi_2392 overlap by 1 nucleotides Echvi_2392 and Echvi_2393 are separated by 71 nucleotides Echvi_2393 and Echvi_2394 are separated by 104 nucleotides
Echvi_2391: Echvi_2391 - Predicted O-methyltransferase, at 2,833,500 to 2,834,276
_2391
Echvi_2392: Echvi_2392 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 2,834,276 to 2,834,662
_2392
Echvi_2393: Echvi_2393 - uracil-DNA glycosylase, at 2,834,734 to 2,835,396
_2393
Echvi_2394: Echvi_2394 - signal peptidase I, bacterial type, at 2,835,501 to 2,836,571
_2394
Position (kb)
2834
2835
2836 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2834.278 kb on - strand at 2834.278 kb on - strand at 2834.393 kb on - strand, within Echvi_2392 at 2834.413 kb on - strand, within Echvi_2392 at 2834.413 kb on - strand, within Echvi_2392 at 2834.502 kb on - strand, within Echvi_2392 at 2834.502 kb on - strand, within Echvi_2392 at 2834.533 kb on + strand, within Echvi_2392 at 2834.534 kb on - strand, within Echvi_2392 at 2834.536 kb on + strand, within Echvi_2392 at 2834.537 kb on - strand, within Echvi_2392 at 2834.565 kb on + strand, within Echvi_2392 at 2834.565 kb on + strand, within Echvi_2392 at 2834.566 kb on - strand, within Echvi_2392 at 2834.566 kb on - strand, within Echvi_2392 at 2834.569 kb on + strand, within Echvi_2392 at 2834.570 kb on - strand, within Echvi_2392 at 2834.570 kb on - strand, within Echvi_2392 at 2834.570 kb on - strand, within Echvi_2392 at 2834.570 kb on - strand, within Echvi_2392 at 2834.577 kb on + strand, within Echvi_2392 at 2834.578 kb on - strand, within Echvi_2392 at 2834.578 kb on - strand, within Echvi_2392 at 2834.601 kb on + strand, within Echvi_2392 at 2834.602 kb on - strand, within Echvi_2392 at 2834.613 kb on + strand, within Echvi_2392 at 2834.614 kb on - strand, within Echvi_2392 at 2834.618 kb on - strand, within Echvi_2392 at 2834.618 kb on - strand, within Echvi_2392 at 2834.648 kb on - strand at 2834.663 kb on + strand at 2834.704 kb on + strand at 2834.704 kb on + strand at 2834.705 kb on - strand at 2834.747 kb on + strand at 2834.899 kb on - strand, within Echvi_2393 at 2835.009 kb on + strand, within Echvi_2393 at 2835.010 kb on - strand, within Echvi_2393 at 2835.111 kb on + strand, within Echvi_2393 at 2835.166 kb on - strand, within Echvi_2393 at 2835.213 kb on - strand, within Echvi_2393 at 2835.213 kb on - strand, within Echvi_2393 at 2835.358 kb on + strand at 2835.358 kb on + strand at 2835.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,834,278 - +0.8 2,834,278 - +0.8 2,834,393 - Echvi_2392 0.30 -0.1 2,834,413 - Echvi_2392 0.35 +0.7 2,834,413 - Echvi_2392 0.35 +0.3 2,834,502 - Echvi_2392 0.58 -0.1 2,834,502 - Echvi_2392 0.58 -0.4 2,834,533 + Echvi_2392 0.66 -2.5 2,834,534 - Echvi_2392 0.67 -0.6 2,834,536 + Echvi_2392 0.67 -1.0 2,834,537 - Echvi_2392 0.67 +0.1 2,834,565 + Echvi_2392 0.75 +0.6 2,834,565 + Echvi_2392 0.75 +0.1 2,834,566 - Echvi_2392 0.75 +1.8 2,834,566 - Echvi_2392 0.75 +0.2 2,834,569 + Echvi_2392 0.76 +0.2 2,834,570 - Echvi_2392 0.76 +0.3 2,834,570 - Echvi_2392 0.76 -0.6 2,834,570 - Echvi_2392 0.76 -0.1 2,834,570 - Echvi_2392 0.76 +0.5 2,834,577 + Echvi_2392 0.78 -0.3 2,834,578 - Echvi_2392 0.78 -0.9 2,834,578 - Echvi_2392 0.78 +0.3 2,834,601 + Echvi_2392 0.84 +0.4 2,834,602 - Echvi_2392 0.84 +0.6 2,834,613 + Echvi_2392 0.87 -0.7 2,834,614 - Echvi_2392 0.87 -0.4 2,834,618 - Echvi_2392 0.88 -2.6 2,834,618 - Echvi_2392 0.88 +0.7 2,834,648 - -0.5 2,834,663 + +0.4 2,834,704 + +1.5 2,834,704 + +2.1 2,834,705 - +0.2 2,834,747 + -0.5 2,834,899 - Echvi_2393 0.25 -0.3 2,835,009 + Echvi_2393 0.41 -1.1 2,835,010 - Echvi_2393 0.42 +0.4 2,835,111 + Echvi_2393 0.57 +0.8 2,835,166 - Echvi_2393 0.65 -1.2 2,835,213 - Echvi_2393 0.72 -0.9 2,835,213 - Echvi_2393 0.72 -0.7 2,835,358 + +0.9 2,835,358 + +0.3 2,835,359 - +0.3
Or see this region's nucleotide sequence