Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2202 and Echvi_2203 are separated by 4 nucleotides Echvi_2203 and Echvi_2204 are separated by 134 nucleotides
Echvi_2202: Echvi_2202 - branched-chain amino acid aminotransferase, group II, at 2,629,150 to 2,630,217
_2202
Echvi_2203: Echvi_2203 - ATP:cob(I)alamin adenosyltransferase, at 2,630,222 to 2,630,770
_2203
Echvi_2204: Echvi_2204 - ABC-type antimicrobial peptide transport system, ATPase component, at 2,630,905 to 2,631,627
_2204
Position (kb)
2630
2631 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2629.290 kb on - strand, within Echvi_2202 at 2629.471 kb on - strand, within Echvi_2202 at 2629.561 kb on + strand, within Echvi_2202 at 2629.671 kb on - strand, within Echvi_2202 at 2629.681 kb on + strand, within Echvi_2202 at 2629.737 kb on + strand, within Echvi_2202 at 2629.744 kb on - strand, within Echvi_2202 at 2629.761 kb on + strand, within Echvi_2202 at 2629.772 kb on + strand, within Echvi_2202 at 2629.773 kb on - strand, within Echvi_2202 at 2629.773 kb on - strand, within Echvi_2202 at 2629.773 kb on - strand, within Echvi_2202 at 2629.792 kb on - strand, within Echvi_2202 at 2629.805 kb on + strand, within Echvi_2202 at 2629.864 kb on + strand, within Echvi_2202 at 2629.879 kb on + strand, within Echvi_2202 at 2629.959 kb on + strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.963 kb on + strand, within Echvi_2202 at 2629.964 kb on - strand, within Echvi_2202 at 2629.971 kb on + strand, within Echvi_2202 at 2629.971 kb on + strand, within Echvi_2202 at 2629.972 kb on - strand, within Echvi_2202 at 2629.985 kb on + strand, within Echvi_2202 at 2630.128 kb on + strand at 2630.129 kb on - strand at 2630.203 kb on + strand at 2630.221 kb on - strand at 2630.252 kb on + strand at 2630.258 kb on + strand at 2630.258 kb on + strand at 2630.258 kb on + strand at 2630.264 kb on + strand at 2630.286 kb on - strand, within Echvi_2203 at 2630.296 kb on - strand, within Echvi_2203 at 2630.317 kb on - strand, within Echvi_2203 at 2630.332 kb on + strand, within Echvi_2203 at 2630.409 kb on + strand, within Echvi_2203 at 2630.438 kb on + strand, within Echvi_2203 at 2630.460 kb on - strand, within Echvi_2203 at 2630.563 kb on + strand, within Echvi_2203 at 2630.576 kb on - strand, within Echvi_2203 at 2630.760 kb on + strand at 2630.761 kb on - strand at 2630.853 kb on - strand at 2630.853 kb on - strand at 2630.894 kb on + strand at 2630.903 kb on + strand at 2630.906 kb on + strand at 2630.981 kb on - strand, within Echvi_2204 at 2631.002 kb on + strand, within Echvi_2204 at 2631.003 kb on - strand, within Echvi_2204 at 2631.036 kb on + strand, within Echvi_2204 at 2631.036 kb on + strand, within Echvi_2204 at 2631.037 kb on - strand, within Echvi_2204 at 2631.037 kb on - strand, within Echvi_2204 at 2631.081 kb on + strand, within Echvi_2204 at 2631.114 kb on + strand, within Echvi_2204 at 2631.132 kb on + strand, within Echvi_2204 at 2631.136 kb on - strand, within Echvi_2204 at 2631.148 kb on + strand, within Echvi_2204 at 2631.291 kb on - strand, within Echvi_2204 at 2631.428 kb on - strand, within Echvi_2204 at 2631.434 kb on + strand, within Echvi_2204 at 2631.435 kb on - strand, within Echvi_2204 at 2631.435 kb on - strand, within Echvi_2204 at 2631.521 kb on + strand, within Echvi_2204 at 2631.522 kb on - strand, within Echvi_2204 at 2631.522 kb on - strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.544 kb on - strand, within Echvi_2204 at 2631.544 kb on - strand, within Echvi_2204 at 2631.588 kb on - strand at 2631.681 kb on - strand at 2631.696 kb on + strand at 2631.706 kb on - strand at 2631.723 kb on + strand at 2631.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,629,290 - Echvi_2202 0.13 +1.1 2,629,471 - Echvi_2202 0.30 -0.4 2,629,561 + Echvi_2202 0.38 +0.1 2,629,671 - Echvi_2202 0.49 -0.7 2,629,681 + Echvi_2202 0.50 -0.7 2,629,737 + Echvi_2202 0.55 +1.0 2,629,744 - Echvi_2202 0.56 -0.5 2,629,761 + Echvi_2202 0.57 -1.0 2,629,772 + Echvi_2202 0.58 -1.9 2,629,773 - Echvi_2202 0.58 -0.4 2,629,773 - Echvi_2202 0.58 +0.0 2,629,773 - Echvi_2202 0.58 +0.1 2,629,792 - Echvi_2202 0.60 +0.8 2,629,805 + Echvi_2202 0.61 +0.9 2,629,864 + Echvi_2202 0.67 -0.5 2,629,879 + Echvi_2202 0.68 +0.4 2,629,959 + Echvi_2202 0.76 +1.0 2,629,960 - Echvi_2202 0.76 +2.1 2,629,960 - Echvi_2202 0.76 +1.2 2,629,960 - Echvi_2202 0.76 -0.9 2,629,960 - Echvi_2202 0.76 -1.5 2,629,960 - Echvi_2202 0.76 +0.2 2,629,963 + Echvi_2202 0.76 -0.5 2,629,964 - Echvi_2202 0.76 -0.3 2,629,971 + Echvi_2202 0.77 +1.4 2,629,971 + Echvi_2202 0.77 -2.0 2,629,972 - Echvi_2202 0.77 +0.7 2,629,985 + Echvi_2202 0.78 +1.3 2,630,128 + +0.9 2,630,129 - +0.8 2,630,203 + -0.2 2,630,221 - +0.0 2,630,252 + +0.2 2,630,258 + +0.2 2,630,258 + +0.1 2,630,258 + -0.7 2,630,264 + -0.5 2,630,286 - Echvi_2203 0.12 -0.0 2,630,296 - Echvi_2203 0.13 -1.2 2,630,317 - Echvi_2203 0.17 -0.3 2,630,332 + Echvi_2203 0.20 -1.7 2,630,409 + Echvi_2203 0.34 -1.8 2,630,438 + Echvi_2203 0.39 -2.1 2,630,460 - Echvi_2203 0.43 -1.1 2,630,563 + Echvi_2203 0.62 -0.7 2,630,576 - Echvi_2203 0.64 -0.4 2,630,760 + +0.0 2,630,761 - -1.5 2,630,853 - +2.8 2,630,853 - -1.5 2,630,894 + +0.2 2,630,903 + -0.6 2,630,906 + -0.4 2,630,981 - Echvi_2204 0.11 +0.2 2,631,002 + Echvi_2204 0.13 -0.6 2,631,003 - Echvi_2204 0.14 +0.8 2,631,036 + Echvi_2204 0.18 -0.2 2,631,036 + Echvi_2204 0.18 +0.4 2,631,037 - Echvi_2204 0.18 -0.9 2,631,037 - Echvi_2204 0.18 -0.0 2,631,081 + Echvi_2204 0.24 -0.2 2,631,114 + Echvi_2204 0.29 +0.6 2,631,132 + Echvi_2204 0.31 -0.5 2,631,136 - Echvi_2204 0.32 -1.9 2,631,148 + Echvi_2204 0.34 -0.7 2,631,291 - Echvi_2204 0.53 -0.5 2,631,428 - Echvi_2204 0.72 -0.8 2,631,434 + Echvi_2204 0.73 -0.1 2,631,435 - Echvi_2204 0.73 +2.2 2,631,435 - Echvi_2204 0.73 +0.8 2,631,521 + Echvi_2204 0.85 +0.3 2,631,522 - Echvi_2204 0.85 -0.8 2,631,522 - Echvi_2204 0.85 +0.1 2,631,541 + Echvi_2204 0.88 -0.7 2,631,541 + Echvi_2204 0.88 -2.0 2,631,541 + Echvi_2204 0.88 +0.1 2,631,541 + Echvi_2204 0.88 +0.5 2,631,541 + Echvi_2204 0.88 +0.8 2,631,541 + Echvi_2204 0.88 -1.2 2,631,542 - Echvi_2204 0.88 -0.7 2,631,542 - Echvi_2204 0.88 +0.4 2,631,542 - Echvi_2204 0.88 +0.2 2,631,542 - Echvi_2204 0.88 +0.2 2,631,542 - Echvi_2204 0.88 +0.4 2,631,542 - Echvi_2204 0.88 -0.4 2,631,542 - Echvi_2204 0.88 -0.2 2,631,544 - Echvi_2204 0.88 -0.0 2,631,544 - Echvi_2204 0.88 -1.0 2,631,588 - -0.9 2,631,681 - -0.0 2,631,696 + -1.3 2,631,706 - +1.8 2,631,723 + +0.2 2,631,724 - +0.5
Or see this region's nucleotide sequence