Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1521 and Echvi_1522 are separated by 103 nucleotides Echvi_1522 and Echvi_1523 overlap by 29 nucleotides
Echvi_1521: Echvi_1521 - hypothetical protein, at 1,745,093 to 1,746,166
_1521
Echvi_1522: Echvi_1522 - Membrane proteins related to metalloendopeptidases, at 1,746,270 to 1,747,172
_1522
Echvi_1523: Echvi_1523 - Predicted permeases, at 1,747,144 to 1,748,082
_1523
Position (kb)
1746
1747
1748 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1745.283 kb on + strand, within Echvi_1521 at 1745.283 kb on + strand, within Echvi_1521 at 1745.283 kb on + strand, within Echvi_1521 at 1745.284 kb on - strand, within Echvi_1521 at 1745.284 kb on - strand, within Echvi_1521 at 1745.286 kb on + strand, within Echvi_1521 at 1745.286 kb on + strand, within Echvi_1521 at 1745.287 kb on - strand, within Echvi_1521 at 1745.287 kb on - strand, within Echvi_1521 at 1745.304 kb on - strand, within Echvi_1521 at 1745.316 kb on + strand, within Echvi_1521 at 1745.317 kb on - strand, within Echvi_1521 at 1745.371 kb on - strand, within Echvi_1521 at 1745.419 kb on + strand, within Echvi_1521 at 1745.420 kb on - strand, within Echvi_1521 at 1745.506 kb on + strand, within Echvi_1521 at 1745.507 kb on - strand, within Echvi_1521 at 1745.517 kb on + strand, within Echvi_1521 at 1745.518 kb on - strand, within Echvi_1521 at 1745.520 kb on + strand, within Echvi_1521 at 1745.521 kb on - strand, within Echvi_1521 at 1745.552 kb on - strand, within Echvi_1521 at 1745.579 kb on + strand, within Echvi_1521 at 1745.626 kb on - strand, within Echvi_1521 at 1745.626 kb on - strand, within Echvi_1521 at 1745.627 kb on + strand, within Echvi_1521 at 1745.628 kb on - strand, within Echvi_1521 at 1745.629 kb on + strand, within Echvi_1521 at 1745.629 kb on + strand, within Echvi_1521 at 1745.629 kb on + strand, within Echvi_1521 at 1745.630 kb on - strand, within Echvi_1521 at 1745.630 kb on - strand, within Echvi_1521 at 1745.630 kb on - strand, within Echvi_1521 at 1745.630 kb on - strand, within Echvi_1521 at 1745.630 kb on - strand, within Echvi_1521 at 1745.630 kb on - strand, within Echvi_1521 at 1745.642 kb on - strand, within Echvi_1521 at 1745.642 kb on - strand, within Echvi_1521 at 1745.675 kb on + strand, within Echvi_1521 at 1745.717 kb on + strand, within Echvi_1521 at 1745.718 kb on - strand, within Echvi_1521 at 1745.742 kb on - strand, within Echvi_1521 at 1745.742 kb on - strand, within Echvi_1521 at 1745.742 kb on - strand, within Echvi_1521 at 1745.743 kb on + strand, within Echvi_1521 at 1745.744 kb on - strand, within Echvi_1521 at 1745.744 kb on - strand, within Echvi_1521 at 1745.803 kb on + strand, within Echvi_1521 at 1745.803 kb on + strand, within Echvi_1521 at 1745.803 kb on + strand, within Echvi_1521 at 1745.804 kb on - strand, within Echvi_1521 at 1745.807 kb on + strand, within Echvi_1521 at 1745.815 kb on + strand, within Echvi_1521 at 1745.907 kb on + strand, within Echvi_1521 at 1745.907 kb on + strand, within Echvi_1521 at 1745.907 kb on + strand, within Echvi_1521 at 1745.907 kb on + strand, within Echvi_1521 at 1745.926 kb on + strand, within Echvi_1521 at 1745.926 kb on + strand, within Echvi_1521 at 1745.926 kb on + strand, within Echvi_1521 at 1745.927 kb on - strand, within Echvi_1521 at 1745.927 kb on - strand, within Echvi_1521 at 1745.931 kb on - strand, within Echvi_1521 at 1745.931 kb on - strand, within Echvi_1521 at 1746.005 kb on - strand, within Echvi_1521 at 1746.005 kb on - strand, within Echvi_1521 at 1746.005 kb on - strand, within Echvi_1521 at 1746.091 kb on - strand at 1746.148 kb on + strand at 1746.149 kb on - strand at 1746.164 kb on + strand at 1746.173 kb on - strand at 1746.184 kb on + strand at 1746.184 kb on + strand at 1746.185 kb on - strand at 1746.239 kb on - strand at 1746.242 kb on + strand at 1746.256 kb on + strand at 1746.289 kb on + strand at 1746.298 kb on + strand at 1746.341 kb on - strand at 1746.366 kb on - strand, within Echvi_1522 at 1746.375 kb on - strand, within Echvi_1522 at 1746.405 kb on + strand, within Echvi_1522 at 1746.406 kb on - strand, within Echvi_1522 at 1746.407 kb on + strand, within Echvi_1522 at 1746.407 kb on + strand, within Echvi_1522 at 1746.407 kb on + strand, within Echvi_1522 at 1746.407 kb on + strand, within Echvi_1522 at 1746.407 kb on + strand, within Echvi_1522 at 1746.408 kb on - strand, within Echvi_1522 at 1746.408 kb on - strand, within Echvi_1522 at 1746.408 kb on - strand, within Echvi_1522 at 1746.408 kb on - strand, within Echvi_1522 at 1746.433 kb on - strand, within Echvi_1522 at 1746.442 kb on + strand, within Echvi_1522 at 1746.443 kb on - strand, within Echvi_1522 at 1746.452 kb on + strand, within Echvi_1522 at 1746.452 kb on + strand, within Echvi_1522 at 1746.452 kb on + strand, within Echvi_1522 at 1746.452 kb on + strand, within Echvi_1522 at 1746.452 kb on + strand, within Echvi_1522 at 1746.474 kb on - strand, within Echvi_1522 at 1746.547 kb on - strand, within Echvi_1522 at 1746.548 kb on + strand, within Echvi_1522 at 1746.548 kb on + strand, within Echvi_1522 at 1746.548 kb on + strand, within Echvi_1522 at 1746.548 kb on + strand, within Echvi_1522 at 1746.549 kb on - strand, within Echvi_1522 at 1746.553 kb on - strand, within Echvi_1522 at 1746.557 kb on + strand, within Echvi_1522 at 1746.558 kb on + strand, within Echvi_1522 at 1746.559 kb on - strand, within Echvi_1522 at 1746.564 kb on - strand, within Echvi_1522 at 1746.665 kb on - strand, within Echvi_1522 at 1746.675 kb on - strand, within Echvi_1522 at 1746.696 kb on + strand, within Echvi_1522 at 1746.736 kb on + strand, within Echvi_1522 at 1746.737 kb on - strand at 1746.758 kb on - strand, within Echvi_1522 at 1746.805 kb on - strand, within Echvi_1522 at 1746.822 kb on - strand, within Echvi_1522 at 1746.822 kb on - strand, within Echvi_1522 at 1746.827 kb on - strand, within Echvi_1522 at 1746.872 kb on + strand, within Echvi_1522 at 1746.872 kb on + strand, within Echvi_1522 at 1746.917 kb on - strand, within Echvi_1522 at 1746.934 kb on + strand, within Echvi_1522 at 1746.934 kb on + strand, within Echvi_1522 at 1746.934 kb on + strand, within Echvi_1522 at 1746.934 kb on + strand, within Echvi_1522 at 1746.935 kb on - strand, within Echvi_1522 at 1746.935 kb on - strand, within Echvi_1522 at 1746.935 kb on - strand, within Echvi_1522 at 1746.935 kb on - strand, within Echvi_1522 at 1746.935 kb on - strand, within Echvi_1522 at 1746.935 kb on - strand, within Echvi_1522 at 1746.935 kb on - strand at 1746.978 kb on + strand, within Echvi_1522 at 1746.980 kb on + strand, within Echvi_1522 at 1746.981 kb on - strand, within Echvi_1522 at 1746.981 kb on - strand, within Echvi_1522 at 1747.020 kb on + strand, within Echvi_1522 at 1747.032 kb on + strand, within Echvi_1522 at 1747.033 kb on - strand, within Echvi_1522 at 1747.045 kb on + strand, within Echvi_1522 at 1747.045 kb on + strand, within Echvi_1522 at 1747.045 kb on + strand, within Echvi_1522 at 1747.046 kb on - strand, within Echvi_1522 at 1747.117 kb on + strand at 1747.145 kb on + strand at 1747.146 kb on - strand at 1747.146 kb on - strand at 1747.267 kb on + strand, within Echvi_1523 at 1747.279 kb on + strand, within Echvi_1523 at 1747.280 kb on - strand, within Echvi_1523 at 1747.285 kb on + strand, within Echvi_1523 at 1747.286 kb on - strand, within Echvi_1523 at 1747.290 kb on + strand, within Echvi_1523 at 1747.296 kb on + strand, within Echvi_1523 at 1747.297 kb on - strand, within Echvi_1523 at 1747.297 kb on - strand, within Echvi_1523 at 1747.301 kb on + strand, within Echvi_1523 at 1747.301 kb on + strand, within Echvi_1523 at 1747.302 kb on - strand, within Echvi_1523 at 1747.302 kb on - strand, within Echvi_1523 at 1747.322 kb on - strand, within Echvi_1523 at 1747.430 kb on + strand, within Echvi_1523 at 1747.493 kb on - strand, within Echvi_1523 at 1747.529 kb on - strand, within Echvi_1523 at 1747.549 kb on + strand, within Echvi_1523 at 1747.549 kb on + strand, within Echvi_1523 at 1747.550 kb on - strand, within Echvi_1523 at 1747.550 kb on - strand, within Echvi_1523 at 1747.550 kb on - strand, within Echvi_1523 at 1747.604 kb on + strand, within Echvi_1523 at 1747.605 kb on - strand, within Echvi_1523 at 1747.605 kb on - strand, within Echvi_1523 at 1747.655 kb on - strand, within Echvi_1523 at 1747.655 kb on - strand, within Echvi_1523 at 1747.655 kb on - strand, within Echvi_1523 at 1747.657 kb on - strand, within Echvi_1523 at 1747.657 kb on - strand, within Echvi_1523 at 1747.705 kb on + strand, within Echvi_1523 at 1747.738 kb on + strand, within Echvi_1523 at 1747.774 kb on + strand, within Echvi_1523 at 1747.922 kb on - strand, within Echvi_1523 at 1748.074 kb on - strand at 1748.074 kb on - strand at 1748.104 kb on + strand at 1748.115 kb on + strand at 1748.115 kb on + strand at 1748.115 kb on + strand at 1748.115 kb on + strand at 1748.117 kb on + strand at 1748.117 kb on + strand at 1748.134 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,745,283 + Echvi_1521 0.18 -1.1 1,745,283 + Echvi_1521 0.18 +0.3 1,745,283 + Echvi_1521 0.18 -0.6 1,745,284 - Echvi_1521 0.18 +0.2 1,745,284 - Echvi_1521 0.18 +0.3 1,745,286 + Echvi_1521 0.18 -1.6 1,745,286 + Echvi_1521 0.18 -0.5 1,745,287 - Echvi_1521 0.18 +0.0 1,745,287 - Echvi_1521 0.18 -0.9 1,745,304 - Echvi_1521 0.20 +0.1 1,745,316 + Echvi_1521 0.21 +0.8 1,745,317 - Echvi_1521 0.21 -0.4 1,745,371 - Echvi_1521 0.26 -1.6 1,745,419 + Echvi_1521 0.30 +0.3 1,745,420 - Echvi_1521 0.30 +1.0 1,745,506 + Echvi_1521 0.38 +0.9 1,745,507 - Echvi_1521 0.39 -0.9 1,745,517 + Echvi_1521 0.39 -0.0 1,745,518 - Echvi_1521 0.40 +0.5 1,745,520 + Echvi_1521 0.40 +0.6 1,745,521 - Echvi_1521 0.40 +0.9 1,745,552 - Echvi_1521 0.43 -1.3 1,745,579 + Echvi_1521 0.45 +0.3 1,745,626 - Echvi_1521 0.50 -1.2 1,745,626 - Echvi_1521 0.50 +0.6 1,745,627 + Echvi_1521 0.50 -1.1 1,745,628 - Echvi_1521 0.50 -0.2 1,745,629 + Echvi_1521 0.50 +0.3 1,745,629 + Echvi_1521 0.50 -2.6 1,745,629 + Echvi_1521 0.50 +0.2 1,745,630 - Echvi_1521 0.50 +0.2 1,745,630 - Echvi_1521 0.50 +0.6 1,745,630 - Echvi_1521 0.50 -2.3 1,745,630 - Echvi_1521 0.50 -0.7 1,745,630 - Echvi_1521 0.50 +0.4 1,745,630 - Echvi_1521 0.50 +0.5 1,745,642 - Echvi_1521 0.51 +2.3 1,745,642 - Echvi_1521 0.51 -0.6 1,745,675 + Echvi_1521 0.54 +0.3 1,745,717 + Echvi_1521 0.58 -0.7 1,745,718 - Echvi_1521 0.58 -0.1 1,745,742 - Echvi_1521 0.60 -0.7 1,745,742 - Echvi_1521 0.60 -1.3 1,745,742 - Echvi_1521 0.60 -0.3 1,745,743 + Echvi_1521 0.61 -0.9 1,745,744 - Echvi_1521 0.61 -1.3 1,745,744 - Echvi_1521 0.61 -0.2 1,745,803 + Echvi_1521 0.66 -1.7 1,745,803 + Echvi_1521 0.66 -0.3 1,745,803 + Echvi_1521 0.66 -1.0 1,745,804 - Echvi_1521 0.66 +0.5 1,745,807 + Echvi_1521 0.66 +0.5 1,745,815 + Echvi_1521 0.67 +0.6 1,745,907 + Echvi_1521 0.76 -0.2 1,745,907 + Echvi_1521 0.76 +0.2 1,745,907 + Echvi_1521 0.76 +0.6 1,745,907 + Echvi_1521 0.76 -2.5 1,745,926 + Echvi_1521 0.78 -0.7 1,745,926 + Echvi_1521 0.78 -0.3 1,745,926 + Echvi_1521 0.78 +0.2 1,745,927 - Echvi_1521 0.78 +0.7 1,745,927 - Echvi_1521 0.78 +0.0 1,745,931 - Echvi_1521 0.78 +0.7 1,745,931 - Echvi_1521 0.78 -1.1 1,746,005 - Echvi_1521 0.85 -1.2 1,746,005 - Echvi_1521 0.85 +0.5 1,746,005 - Echvi_1521 0.85 -0.7 1,746,091 - +1.9 1,746,148 + -0.8 1,746,149 - -0.4 1,746,164 + +1.9 1,746,173 - +0.7 1,746,184 + -0.4 1,746,184 + -1.3 1,746,185 - -0.5 1,746,239 - -0.3 1,746,242 + +0.1 1,746,256 + -0.4 1,746,289 + -1.8 1,746,298 + +0.0 1,746,341 - -0.6 1,746,366 - Echvi_1522 0.11 -1.5 1,746,375 - Echvi_1522 0.12 +0.9 1,746,405 + Echvi_1522 0.15 +0.0 1,746,406 - Echvi_1522 0.15 -0.7 1,746,407 + Echvi_1522 0.15 -1.0 1,746,407 + Echvi_1522 0.15 -1.3 1,746,407 + Echvi_1522 0.15 +1.3 1,746,407 + Echvi_1522 0.15 +0.3 1,746,407 + Echvi_1522 0.15 +0.1 1,746,408 - Echvi_1522 0.15 -0.2 1,746,408 - Echvi_1522 0.15 -2.3 1,746,408 - Echvi_1522 0.15 +0.6 1,746,408 - Echvi_1522 0.15 +0.9 1,746,433 - Echvi_1522 0.18 +0.7 1,746,442 + Echvi_1522 0.19 -0.9 1,746,443 - Echvi_1522 0.19 -0.3 1,746,452 + Echvi_1522 0.20 -0.9 1,746,452 + Echvi_1522 0.20 -0.3 1,746,452 + Echvi_1522 0.20 -0.9 1,746,452 + Echvi_1522 0.20 -0.5 1,746,452 + Echvi_1522 0.20 +0.1 1,746,474 - Echvi_1522 0.23 -1.6 1,746,547 - Echvi_1522 0.31 -0.2 1,746,548 + Echvi_1522 0.31 +0.2 1,746,548 + Echvi_1522 0.31 -0.2 1,746,548 + Echvi_1522 0.31 +1.9 1,746,548 + Echvi_1522 0.31 +0.6 1,746,549 - Echvi_1522 0.31 -2.4 1,746,553 - Echvi_1522 0.31 -3.3 1,746,557 + Echvi_1522 0.32 -0.4 1,746,558 + Echvi_1522 0.32 -0.1 1,746,559 - Echvi_1522 0.32 +0.4 1,746,564 - Echvi_1522 0.33 -0.3 1,746,665 - Echvi_1522 0.44 -1.7 1,746,675 - Echvi_1522 0.45 -0.1 1,746,696 + Echvi_1522 0.47 -0.3 1,746,736 + Echvi_1522 0.52 -1.3 1,746,737 - -0.1 1,746,758 - Echvi_1522 0.54 -0.5 1,746,805 - Echvi_1522 0.59 -0.9 1,746,822 - Echvi_1522 0.61 -0.7 1,746,822 - Echvi_1522 0.61 +0.1 1,746,827 - Echvi_1522 0.62 +0.1 1,746,872 + Echvi_1522 0.67 -1.6 1,746,872 + Echvi_1522 0.67 -2.0 1,746,917 - Echvi_1522 0.72 +0.1 1,746,934 + Echvi_1522 0.74 +0.5 1,746,934 + Echvi_1522 0.74 +2.2 1,746,934 + Echvi_1522 0.74 +0.5 1,746,934 + Echvi_1522 0.74 +0.3 1,746,935 - Echvi_1522 0.74 +1.2 1,746,935 - Echvi_1522 0.74 -1.3 1,746,935 - Echvi_1522 0.74 +0.5 1,746,935 - Echvi_1522 0.74 +0.9 1,746,935 - Echvi_1522 0.74 +0.7 1,746,935 - Echvi_1522 0.74 -1.9 1,746,935 - +1.3 1,746,978 + Echvi_1522 0.78 -0.7 1,746,980 + Echvi_1522 0.79 +0.1 1,746,981 - Echvi_1522 0.79 -1.0 1,746,981 - Echvi_1522 0.79 -0.8 1,747,020 + Echvi_1522 0.83 -1.4 1,747,032 + Echvi_1522 0.84 -1.6 1,747,033 - Echvi_1522 0.84 +0.3 1,747,045 + Echvi_1522 0.86 -0.1 1,747,045 + Echvi_1522 0.86 +1.1 1,747,045 + Echvi_1522 0.86 -1.4 1,747,046 - Echvi_1522 0.86 +1.5 1,747,117 + +1.7 1,747,145 + -0.1 1,747,146 - +0.2 1,747,146 - +0.1 1,747,267 + Echvi_1523 0.13 +0.6 1,747,279 + Echvi_1523 0.14 -1.1 1,747,280 - Echvi_1523 0.14 -0.0 1,747,285 + Echvi_1523 0.15 +1.5 1,747,286 - Echvi_1523 0.15 +1.3 1,747,290 + Echvi_1523 0.16 -0.1 1,747,296 + Echvi_1523 0.16 +0.3 1,747,297 - Echvi_1523 0.16 +0.3 1,747,297 - Echvi_1523 0.16 +2.2 1,747,301 + Echvi_1523 0.17 +0.5 1,747,301 + Echvi_1523 0.17 -1.8 1,747,302 - Echvi_1523 0.17 +1.4 1,747,302 - Echvi_1523 0.17 +0.4 1,747,322 - Echvi_1523 0.19 -1.0 1,747,430 + Echvi_1523 0.30 +0.9 1,747,493 - Echvi_1523 0.37 +0.1 1,747,529 - Echvi_1523 0.41 -0.1 1,747,549 + Echvi_1523 0.43 +0.1 1,747,549 + Echvi_1523 0.43 +1.0 1,747,550 - Echvi_1523 0.43 -0.5 1,747,550 - Echvi_1523 0.43 +0.2 1,747,550 - Echvi_1523 0.43 -0.2 1,747,604 + Echvi_1523 0.49 -0.1 1,747,605 - Echvi_1523 0.49 +1.3 1,747,605 - Echvi_1523 0.49 -1.8 1,747,655 - Echvi_1523 0.54 +1.9 1,747,655 - Echvi_1523 0.54 -0.1 1,747,655 - Echvi_1523 0.54 +0.2 1,747,657 - Echvi_1523 0.55 -1.0 1,747,657 - Echvi_1523 0.55 +0.4 1,747,705 + Echvi_1523 0.60 -0.9 1,747,738 + Echvi_1523 0.63 +0.7 1,747,774 + Echvi_1523 0.67 +0.5 1,747,922 - Echvi_1523 0.83 +0.3 1,748,074 - +0.8 1,748,074 - +0.0 1,748,104 + -0.7 1,748,115 + +0.3 1,748,115 + +0.2 1,748,115 + -2.1 1,748,115 + -0.6 1,748,117 + +0.9 1,748,117 + +0.6 1,748,134 + +1.7
Or see this region's nucleotide sequence