Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02595 and CA264_02600 are separated by 226 nucleotides CA264_02600 and CA264_02605 are separated by 154 nucleotides CA264_02605 and CA264_02610 are separated by 2 nucleotides
CA264_02595: CA264_02595 - oxidoreductase, at 602,330 to 603,112
_02595
CA264_02600: CA264_02600 - DsbA family protein, at 603,339 to 603,968
_02600
CA264_02605: CA264_02605 - hypothetical protein, at 604,123 to 604,482
_02605
CA264_02610: CA264_02610 - cation transporter, at 604,485 to 605,396
_02610
Position (kb) 603
604 Strain fitness (log2 ratio) -2
-1
0
1
2 at 602.342 kb on + strand at 602.388 kb on + strand at 602.388 kb on + strand at 602.398 kb on + strand at 602.435 kb on - strand, within CA264_02595 at 602.505 kb on + strand, within CA264_02595 at 602.506 kb on - strand, within CA264_02595 at 602.526 kb on + strand, within CA264_02595 at 603.052 kb on + strand at 603.106 kb on + strand at 603.117 kb on - strand at 603.117 kb on - strand at 603.131 kb on - strand at 603.137 kb on + strand at 603.144 kb on + strand at 603.145 kb on - strand at 603.152 kb on - strand at 603.226 kb on - strand at 603.226 kb on - strand at 603.302 kb on - strand at 603.360 kb on - strand at 603.372 kb on + strand at 603.530 kb on - strand, within CA264_02600 at 603.530 kb on - strand, within CA264_02600 at 603.530 kb on - strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.564 kb on + strand, within CA264_02600 at 603.565 kb on - strand, within CA264_02600 at 603.607 kb on + strand, within CA264_02600 at 603.844 kb on + strand, within CA264_02600 at 603.868 kb on - strand, within CA264_02600 at 603.879 kb on + strand, within CA264_02600 at 603.880 kb on - strand, within CA264_02600 at 603.922 kb on - strand at 603.999 kb on + strand at 603.999 kb on + strand at 604.000 kb on - strand at 604.007 kb on + strand at 604.007 kb on + strand at 604.008 kb on - strand at 604.008 kb on - strand at 604.011 kb on + strand at 604.011 kb on + strand at 604.073 kb on + strand at 604.079 kb on + strand at 604.079 kb on + strand at 604.080 kb on - strand at 604.120 kb on + strand at 604.120 kb on + strand at 604.121 kb on - strand at 604.122 kb on + strand at 604.122 kb on + strand at 604.122 kb on + strand at 604.123 kb on - strand at 604.123 kb on - strand at 604.172 kb on + strand, within CA264_02605 at 604.173 kb on - strand, within CA264_02605 at 604.415 kb on + strand, within CA264_02605 at 604.435 kb on + strand, within CA264_02605 at 604.436 kb on - strand, within CA264_02605 at 604.480 kb on + strand at 604.480 kb on + strand at 604.481 kb on - strand at 604.481 kb on - strand at 604.481 kb on - strand at 604.488 kb on + strand at 604.489 kb on - strand at 604.489 kb on - strand at 604.539 kb on + strand at 604.539 kb on + strand at 604.539 kb on + strand at 604.548 kb on + strand at 604.548 kb on + strand at 604.651 kb on + strand, within CA264_02610 at 604.651 kb on + strand, within CA264_02610 at 604.652 kb on - strand, within CA264_02610 at 604.704 kb on + strand, within CA264_02610 at 604.706 kb on + strand, within CA264_02610 at 604.739 kb on + strand, within CA264_02610 at 604.739 kb on + strand, within CA264_02610 at 604.740 kb on - strand, within CA264_02610 at 604.804 kb on + strand, within CA264_02610 at 604.805 kb on - strand, within CA264_02610 at 604.874 kb on + strand, within CA264_02610
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 602,342 + +1.6 602,388 + +0.6 602,388 + +1.9 602,398 + -2.2 602,435 - CA264_02595 0.13 -2.5 602,505 + CA264_02595 0.22 +1.1 602,506 - CA264_02595 0.22 -0.3 602,526 + CA264_02595 0.25 +0.6 603,052 + -0.3 603,106 + +0.4 603,117 - -0.9 603,117 - +0.2 603,131 - -0.6 603,137 + -0.3 603,144 + -0.3 603,145 - +0.8 603,152 - -1.4 603,226 - -0.1 603,226 - -0.2 603,302 - +1.1 603,360 - -0.4 603,372 + +0.2 603,530 - CA264_02600 0.30 -1.1 603,530 - CA264_02600 0.30 +0.8 603,530 - CA264_02600 0.30 +0.9 603,564 + CA264_02600 0.36 +0.2 603,564 + CA264_02600 0.36 +0.1 603,564 + CA264_02600 0.36 -0.5 603,564 + CA264_02600 0.36 +1.2 603,565 - CA264_02600 0.36 +0.1 603,607 + CA264_02600 0.43 +0.2 603,844 + CA264_02600 0.80 +1.1 603,868 - CA264_02600 0.84 -0.0 603,879 + CA264_02600 0.86 +0.6 603,880 - CA264_02600 0.86 -0.7 603,922 - +0.4 603,999 + -0.7 603,999 + -0.7 604,000 - +1.6 604,007 + +0.3 604,007 + +0.1 604,008 - +0.1 604,008 - +0.9 604,011 + -0.3 604,011 + -0.0 604,073 + +0.4 604,079 + +0.5 604,079 + +0.5 604,080 - -0.1 604,120 + +0.6 604,120 + -0.9 604,121 - +0.1 604,122 + -1.2 604,122 + -0.3 604,122 + +0.4 604,123 - -0.6 604,123 - +0.2 604,172 + CA264_02605 0.14 -0.1 604,173 - CA264_02605 0.14 +0.4 604,415 + CA264_02605 0.81 -0.0 604,435 + CA264_02605 0.87 -0.4 604,436 - CA264_02605 0.87 +0.2 604,480 + +0.5 604,480 + -2.5 604,481 - +0.1 604,481 - -1.4 604,481 - -0.9 604,488 + +0.2 604,489 - +0.7 604,489 - +0.1 604,539 + -0.3 604,539 + -1.0 604,539 + -1.4 604,548 + -0.1 604,548 + -0.8 604,651 + CA264_02610 0.18 +0.6 604,651 + CA264_02610 0.18 -0.5 604,652 - CA264_02610 0.18 -1.1 604,704 + CA264_02610 0.24 -0.9 604,706 + CA264_02610 0.24 -0.6 604,739 + CA264_02610 0.28 -1.2 604,739 + CA264_02610 0.28 +0.2 604,740 - CA264_02610 0.28 -0.4 604,804 + CA264_02610 0.35 -0.4 604,805 - CA264_02610 0.35 +0.2 604,874 + CA264_02610 0.43 -1.0
Or see this region's nucleotide sequence