Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00745 and CA264_00750 are separated by 122 nucleotides CA264_00750 and CA264_00755 are separated by 291 nucleotides CA264_00755 and CA264_00760 are separated by 234 nucleotides
CA264_00745: CA264_00745 - ribonuclease III, at 160,148 to 160,888
_00745
CA264_00750: CA264_00750 - hypothetical protein, at 161,011 to 161,379
_00750
CA264_00755: CA264_00755 - SAM-dependent methyltransferase, at 161,671 to 162,927
_00755
CA264_00760: CA264_00760 - NAD(+) synthase, at 163,162 to 165,048
_00760
Position (kb) 161
162
163 Strain fitness (log2 ratio) -2
-1
0
1
2 at 160.748 kb on - strand, within CA264_00745 at 160.786 kb on - strand, within CA264_00745 at 160.787 kb on + strand, within CA264_00745 at 160.787 kb on + strand, within CA264_00745 at 160.788 kb on - strand, within CA264_00745 at 160.818 kb on + strand at 160.818 kb on + strand at 160.882 kb on + strand at 160.883 kb on - strand at 160.898 kb on + strand at 160.911 kb on - strand at 160.934 kb on - strand at 160.987 kb on + strand at 160.999 kb on + strand at 160.999 kb on + strand at 161.000 kb on - strand at 161.003 kb on + strand at 161.041 kb on + strand at 161.043 kb on + strand at 161.067 kb on - strand, within CA264_00750 at 161.067 kb on - strand, within CA264_00750 at 161.067 kb on - strand, within CA264_00750 at 161.076 kb on - strand, within CA264_00750 at 161.109 kb on - strand, within CA264_00750 at 161.147 kb on + strand, within CA264_00750 at 161.179 kb on + strand, within CA264_00750 at 161.244 kb on + strand, within CA264_00750 at 161.246 kb on + strand, within CA264_00750 at 161.246 kb on + strand, within CA264_00750 at 161.246 kb on + strand, within CA264_00750 at 161.247 kb on - strand, within CA264_00750 at 161.247 kb on - strand, within CA264_00750 at 161.247 kb on - strand, within CA264_00750 at 161.250 kb on + strand, within CA264_00750 at 161.250 kb on + strand, within CA264_00750 at 161.251 kb on - strand, within CA264_00750 at 161.251 kb on - strand, within CA264_00750 at 161.253 kb on - strand, within CA264_00750 at 161.253 kb on - strand, within CA264_00750 at 161.303 kb on + strand, within CA264_00750 at 161.303 kb on + strand, within CA264_00750 at 161.303 kb on + strand, within CA264_00750 at 161.304 kb on - strand, within CA264_00750 at 161.304 kb on - strand, within CA264_00750 at 161.313 kb on - strand, within CA264_00750 at 161.333 kb on - strand, within CA264_00750 at 161.347 kb on - strand at 161.347 kb on - strand at 161.507 kb on + strand at 161.508 kb on - strand at 161.553 kb on + strand at 161.597 kb on + strand at 161.597 kb on + strand at 161.598 kb on - strand at 161.622 kb on - strand at 161.648 kb on - strand at 161.670 kb on + strand at 161.671 kb on - strand at 161.750 kb on + strand at 161.755 kb on + strand at 161.755 kb on + strand at 161.756 kb on - strand at 161.812 kb on - strand, within CA264_00755 at 161.831 kb on + strand, within CA264_00755 at 161.840 kb on - strand, within CA264_00755 at 161.862 kb on + strand, within CA264_00755 at 161.872 kb on + strand, within CA264_00755 at 161.872 kb on + strand, within CA264_00755 at 161.872 kb on + strand, within CA264_00755 at 161.873 kb on - strand, within CA264_00755 at 161.873 kb on - strand, within CA264_00755 at 161.873 kb on - strand, within CA264_00755 at 161.878 kb on + strand, within CA264_00755 at 161.935 kb on - strand, within CA264_00755 at 161.954 kb on - strand, within CA264_00755 at 162.093 kb on + strand, within CA264_00755 at 162.135 kb on - strand, within CA264_00755 at 162.135 kb on - strand, within CA264_00755 at 162.135 kb on - strand, within CA264_00755 at 162.138 kb on + strand, within CA264_00755 at 162.138 kb on + strand, within CA264_00755 at 162.139 kb on - strand, within CA264_00755 at 162.140 kb on + strand, within CA264_00755 at 162.285 kb on - strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.310 kb on + strand, within CA264_00755 at 162.311 kb on - strand, within CA264_00755 at 162.311 kb on - strand, within CA264_00755 at 162.328 kb on + strand, within CA264_00755 at 162.329 kb on - strand, within CA264_00755 at 162.348 kb on + strand, within CA264_00755 at 162.390 kb on - strand, within CA264_00755 at 162.462 kb on - strand, within CA264_00755 at 162.462 kb on - strand, within CA264_00755 at 162.524 kb on - strand, within CA264_00755 at 162.524 kb on - strand, within CA264_00755 at 162.555 kb on + strand, within CA264_00755 at 162.555 kb on + strand, within CA264_00755 at 162.556 kb on - strand, within CA264_00755 at 162.558 kb on + strand, within CA264_00755 at 162.559 kb on - strand, within CA264_00755 at 162.562 kb on + strand, within CA264_00755 at 162.562 kb on + strand, within CA264_00755 at 162.725 kb on - strand, within CA264_00755 at 162.763 kb on - strand, within CA264_00755 at 162.787 kb on + strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.788 kb on - strand, within CA264_00755 at 162.836 kb on + strand at 162.837 kb on - strand at 162.841 kb on + strand at 162.842 kb on - strand at 162.842 kb on - strand at 162.861 kb on + strand at 162.862 kb on - strand at 162.870 kb on - strand at 162.918 kb on + strand at 162.923 kb on + strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.924 kb on - strand at 162.926 kb on - strand at 162.926 kb on - strand at 162.929 kb on - strand at 162.944 kb on + strand at 162.944 kb on + strand at 162.948 kb on + strand at 162.972 kb on - strand at 162.976 kb on - strand at 163.078 kb on + strand at 163.078 kb on + strand at 163.078 kb on + strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.079 kb on - strand at 163.080 kb on + strand at 163.081 kb on - strand at 163.081 kb on - strand at 163.127 kb on + strand at 163.128 kb on - strand at 163.140 kb on + strand at 163.140 kb on + strand at 163.142 kb on + strand at 163.142 kb on + strand at 163.143 kb on - strand at 163.143 kb on - strand at 163.143 kb on - strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.144 kb on + strand at 163.145 kb on - strand at 163.145 kb on - strand at 163.153 kb on + strand at 163.153 kb on + strand at 163.154 kb on - strand at 163.154 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 160,748 - CA264_00745 0.81 -2.0 160,786 - CA264_00745 0.86 +0.1 160,787 + CA264_00745 0.86 -1.5 160,787 + CA264_00745 0.86 +0.0 160,788 - CA264_00745 0.86 -1.9 160,818 + -0.9 160,818 + -1.5 160,882 + -0.4 160,883 - -0.8 160,898 + +0.9 160,911 - +0.7 160,934 - -0.5 160,987 + +0.1 160,999 + -0.6 160,999 + -1.7 161,000 - -0.5 161,003 + +0.2 161,041 + -0.9 161,043 + -0.3 161,067 - CA264_00750 0.15 +2.1 161,067 - CA264_00750 0.15 +0.0 161,067 - CA264_00750 0.15 +0.5 161,076 - CA264_00750 0.18 -0.6 161,109 - CA264_00750 0.27 -1.7 161,147 + CA264_00750 0.37 +0.5 161,179 + CA264_00750 0.46 +0.3 161,244 + CA264_00750 0.63 -0.5 161,246 + CA264_00750 0.64 +0.5 161,246 + CA264_00750 0.64 -1.4 161,246 + CA264_00750 0.64 -0.3 161,247 - CA264_00750 0.64 -1.3 161,247 - CA264_00750 0.64 +0.1 161,247 - CA264_00750 0.64 -0.4 161,250 + CA264_00750 0.65 +0.1 161,250 + CA264_00750 0.65 -1.2 161,251 - CA264_00750 0.65 -0.0 161,251 - CA264_00750 0.65 +0.7 161,253 - CA264_00750 0.66 -0.3 161,253 - CA264_00750 0.66 +1.0 161,303 + CA264_00750 0.79 +0.3 161,303 + CA264_00750 0.79 -0.2 161,303 + CA264_00750 0.79 +0.2 161,304 - CA264_00750 0.79 -0.7 161,304 - CA264_00750 0.79 -0.3 161,313 - CA264_00750 0.82 -0.7 161,333 - CA264_00750 0.87 -1.2 161,347 - +0.7 161,347 - +0.7 161,507 + -1.8 161,508 - -1.1 161,553 + -0.9 161,597 + +0.1 161,597 + +0.7 161,598 - -0.5 161,622 - +1.5 161,648 - -0.1 161,670 + +0.0 161,671 - -1.9 161,750 + -1.3 161,755 + +0.7 161,755 + +0.1 161,756 - +0.5 161,812 - CA264_00755 0.11 -0.0 161,831 + CA264_00755 0.13 -0.4 161,840 - CA264_00755 0.13 +0.6 161,862 + CA264_00755 0.15 +0.0 161,872 + CA264_00755 0.16 +0.1 161,872 + CA264_00755 0.16 -0.3 161,872 + CA264_00755 0.16 +0.1 161,873 - CA264_00755 0.16 -0.2 161,873 - CA264_00755 0.16 +0.3 161,873 - CA264_00755 0.16 -0.9 161,878 + CA264_00755 0.16 +0.5 161,935 - CA264_00755 0.21 +0.6 161,954 - CA264_00755 0.23 -0.3 162,093 + CA264_00755 0.34 -0.9 162,135 - CA264_00755 0.37 +0.4 162,135 - CA264_00755 0.37 -1.1 162,135 - CA264_00755 0.37 -0.3 162,138 + CA264_00755 0.37 +0.3 162,138 + CA264_00755 0.37 +0.8 162,139 - CA264_00755 0.37 -0.2 162,140 + CA264_00755 0.37 +2.7 162,285 - CA264_00755 0.49 -1.0 162,310 + CA264_00755 0.51 +0.1 162,310 + CA264_00755 0.51 -1.2 162,310 + CA264_00755 0.51 -0.4 162,311 - CA264_00755 0.51 +0.1 162,311 - CA264_00755 0.51 -0.9 162,328 + CA264_00755 0.52 -0.3 162,329 - CA264_00755 0.52 +0.3 162,348 + CA264_00755 0.54 -1.3 162,390 - CA264_00755 0.57 +0.3 162,462 - CA264_00755 0.63 -1.1 162,462 - CA264_00755 0.63 -0.2 162,524 - CA264_00755 0.68 +0.1 162,524 - CA264_00755 0.68 -0.3 162,555 + CA264_00755 0.70 +1.7 162,555 + CA264_00755 0.70 -0.2 162,556 - CA264_00755 0.70 -0.8 162,558 + CA264_00755 0.71 -1.2 162,559 - CA264_00755 0.71 -0.2 162,562 + CA264_00755 0.71 +0.3 162,562 + CA264_00755 0.71 +1.3 162,725 - CA264_00755 0.84 -0.6 162,763 - CA264_00755 0.87 -0.1 162,787 + CA264_00755 0.89 +0.5 162,788 - CA264_00755 0.89 -0.9 162,788 - CA264_00755 0.89 -0.9 162,788 - CA264_00755 0.89 -0.2 162,836 + -0.2 162,837 - -0.7 162,841 + -0.4 162,842 - -0.6 162,842 - +0.3 162,861 + -0.4 162,862 - +2.3 162,870 - -1.6 162,918 + +0.1 162,923 + -1.6 162,924 - -0.1 162,924 - -0.5 162,924 - -0.9 162,924 - +0.5 162,926 - +0.0 162,926 - -0.5 162,929 - -1.1 162,944 + +0.4 162,944 + +0.5 162,948 + -0.5 162,972 - -0.3 162,976 - +0.3 163,078 + -0.9 163,078 + -0.9 163,078 + +0.5 163,079 - -0.7 163,079 - -0.4 163,079 - -1.3 163,079 - +0.0 163,079 - +0.1 163,080 + -0.1 163,081 - -0.6 163,081 - -0.1 163,127 + -0.1 163,128 - -0.7 163,140 + +0.3 163,140 + -0.5 163,142 + -0.7 163,142 + +1.3 163,143 - +0.0 163,143 - -0.5 163,143 - +0.4 163,144 + -0.2 163,144 + -1.0 163,144 + -1.1 163,144 + -0.8 163,144 + -0.2 163,145 - +0.2 163,145 - -0.7 163,153 + +1.4 163,153 + -0.9 163,154 - +0.0 163,154 - -0.3
Or see this region's nucleotide sequence