Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01600 and PS417_01605 are separated by 259 nucleotides PS417_01605 and PS417_01610 are separated by 151 nucleotides PS417_01610 and PS417_01615 are separated by 1 nucleotides PS417_01615 and PS417_01620 are separated by 41 nucleotides
PS417_01600: PS417_01600 - peptidase M23, at 352,199 to 353,494
_01600
PS417_01605: PS417_01605 - phosphoglycerate mutase, at 353,754 to 355,280
_01605
PS417_01610: PS417_01610 - sulfurtransferase, at 355,432 to 355,845
_01610
PS417_01615: PS417_01615 - glutaredoxin, at 355,847 to 356,101
_01615
PS417_01620: PS417_01620 - preprotein translocase subunit SecB, at 356,143 to 356,622
_01620
Position (kb) 353
354
355
356 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 353.067 kb on + strand, within PS417_01600 at 353.068 kb on - strand, within PS417_01600 at 353.074 kb on - strand, within PS417_01600 at 353.076 kb on + strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.077 kb on - strand, within PS417_01600 at 353.401 kb on + strand at 353.494 kb on + strand at 353.527 kb on + strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.531 kb on - strand at 353.583 kb on + strand at 353.584 kb on - strand at 353.584 kb on - strand at 353.584 kb on - strand at 353.604 kb on - strand at 353.620 kb on + strand at 353.621 kb on - strand at 353.621 kb on - strand at 353.621 kb on - strand at 353.632 kb on + strand at 353.633 kb on - strand at 353.705 kb on + strand at 353.706 kb on - strand at 354.097 kb on + strand, within PS417_01605 at 354.098 kb on - strand, within PS417_01605 at 354.670 kb on + strand, within PS417_01605 at 355.048 kb on + strand, within PS417_01605 at 355.281 kb on - strand at 355.281 kb on - strand at 355.281 kb on - strand at 355.281 kb on - strand at 355.301 kb on + strand at 355.394 kb on + strand at 355.394 kb on + strand at 355.396 kb on + strand at 355.396 kb on + strand at 355.396 kb on + strand at 355.846 kb on + strand at 355.846 kb on + strand at 356.107 kb on - strand at 356.113 kb on + strand at 356.209 kb on + strand, within PS417_01620 at 356.209 kb on + strand, within PS417_01620
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 353,067 + PS417_01600 0.67 -0.1 353,068 - PS417_01600 0.67 +0.0 353,074 - PS417_01600 0.68 +0.3 353,076 + PS417_01600 0.68 -0.4 353,077 - PS417_01600 0.68 -0.0 353,077 - PS417_01600 0.68 -1.7 353,077 - PS417_01600 0.68 +0.1 353,401 + -1.0 353,494 + -1.3 353,527 + -0.5 353,528 - -1.5 353,528 - -0.1 353,528 - -0.1 353,528 - -0.1 353,531 - +0.4 353,531 - +0.6 353,531 - -0.4 353,531 - -0.4 353,583 + -0.2 353,584 - +0.4 353,584 - +0.1 353,584 - +1.7 353,604 - -0.3 353,620 + -0.6 353,621 - +0.5 353,621 - +1.1 353,621 - -0.2 353,632 + +0.0 353,633 - -0.5 353,705 + -0.5 353,706 - -0.3 354,097 + PS417_01605 0.22 -2.0 354,098 - PS417_01605 0.23 -2.3 354,670 + PS417_01605 0.60 -2.3 355,048 + PS417_01605 0.85 -0.7 355,281 - -1.7 355,281 - -2.7 355,281 - -2.7 355,281 - -1.3 355,301 + -2.9 355,394 + -0.5 355,394 + -0.8 355,396 + -0.3 355,396 + -0.9 355,396 + -0.2 355,846 + +0.0 355,846 + +0.1 356,107 - -0.3 356,113 + -0.4 356,209 + PS417_01620 0.14 +0.3 356,209 + PS417_01620 0.14 -0.2
Or see this region's nucleotide sequence