Experiment: m.b. Chloramphenicol 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10035 and CA264_10040 are separated by 16 nucleotides CA264_10040 and CA264_10045 are separated by 82 nucleotides CA264_10045 and CA264_10050 are separated by 420 nucleotides CA264_10050 and CA264_10055 are separated by 53 nucleotides
CA264_10035: CA264_10035 - hypothetical protein, at 2,331,289 to 2,331,696
_10035
CA264_10040: CA264_10040 - 5-hydroxyisourate hydrolase, at 2,331,713 to 2,332,120
_10040
CA264_10045: CA264_10045 - hypothetical protein, at 2,332,203 to 2,332,505
_10045
CA264_10050: CA264_10050 - hypothetical protein, at 2,332,926 to 2,333,354
_10050
CA264_10055: CA264_10055 - hypothetical protein, at 2,333,408 to 2,334,052
_10055
Position (kb)
2332
2333 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2331.231 kb on + strand at 2331.327 kb on - strand at 2331.345 kb on + strand, within CA264_10035 at 2331.427 kb on + strand, within CA264_10035 at 2331.455 kb on + strand, within CA264_10035 at 2331.684 kb on - strand at 2331.688 kb on - strand at 2331.688 kb on - strand at 2331.688 kb on - strand at 2331.962 kb on + strand, within CA264_10040 at 2331.981 kb on + strand, within CA264_10040 at 2332.230 kb on + strand at 2332.440 kb on + strand, within CA264_10045 at 2332.440 kb on + strand, within CA264_10045 at 2332.878 kb on + strand at 2332.878 kb on + strand at 2332.881 kb on + strand at 2332.881 kb on + strand at 2332.897 kb on - strand at 2332.901 kb on - strand at 2332.925 kb on + strand at 2332.926 kb on - strand at 2333.064 kb on - strand, within CA264_10050 at 2333.064 kb on - strand, within CA264_10050 at 2333.069 kb on - strand, within CA264_10050 at 2333.069 kb on - strand, within CA264_10050 at 2333.185 kb on - strand, within CA264_10050 at 2333.187 kb on + strand, within CA264_10050 at 2333.187 kb on + strand, within CA264_10050 at 2333.188 kb on - strand, within CA264_10050 at 2333.192 kb on + strand, within CA264_10050 at 2333.315 kb on + strand at 2333.315 kb on + strand at 2333.395 kb on + strand at 2333.395 kb on + strand at 2333.407 kb on + strand at 2333.407 kb on + strand at 2333.407 kb on + strand at 2333.407 kb on + strand at 2333.407 kb on + strand at 2333.408 kb on - strand at 2333.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.0005 mg/ml remove 2,331,231 + -2.0 2,331,327 - -0.4 2,331,345 + CA264_10035 0.14 +2.6 2,331,427 + CA264_10035 0.34 -0.2 2,331,455 + CA264_10035 0.41 -0.0 2,331,684 - -0.1 2,331,688 - +0.8 2,331,688 - -0.2 2,331,688 - -0.0 2,331,962 + CA264_10040 0.61 -0.2 2,331,981 + CA264_10040 0.66 -0.8 2,332,230 + -1.2 2,332,440 + CA264_10045 0.78 +0.6 2,332,440 + CA264_10045 0.78 +1.1 2,332,878 + -0.6 2,332,878 + -1.0 2,332,881 + +0.8 2,332,881 + +0.1 2,332,897 - +0.0 2,332,901 - +0.3 2,332,925 + +1.2 2,332,926 - -0.2 2,333,064 - CA264_10050 0.32 +1.2 2,333,064 - CA264_10050 0.32 +0.2 2,333,069 - CA264_10050 0.33 -0.2 2,333,069 - CA264_10050 0.33 +1.2 2,333,185 - CA264_10050 0.60 +0.2 2,333,187 + CA264_10050 0.61 +1.0 2,333,187 + CA264_10050 0.61 +0.7 2,333,188 - CA264_10050 0.61 +1.2 2,333,192 + CA264_10050 0.62 -0.2 2,333,315 + +0.0 2,333,315 + +0.1 2,333,395 + +0.8 2,333,395 + -0.1 2,333,407 + +0.3 2,333,407 + +0.5 2,333,407 + +0.3 2,333,407 + -0.4 2,333,407 + +0.0 2,333,408 - +0.2 2,333,416 + +0.8
Or see this region's nucleotide sequence