Strain Fitness in Escherichia coli BW25113 around b4260
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
4,482,341 | + | +1.2 | |||
4,482,349 | - | -0.5 | |||
4,482,354 | - | -1.3 | |||
4,482,369 | - | -1.1 | |||
4,482,369 | - | -0.6 | |||
4,482,379 | - | -0.7 | |||
4,482,394 | + | +1.3 | |||
4,482,394 | - | -0.4 | |||
4,482,402 | - | -0.9 | |||
4,482,402 | - | +0.0 | |||
4,482,404 | + | -1.1 | |||
4,482,445 | + | +1.6 | |||
4,482,452 | + | -0.8 | |||
4,482,458 | + | -0.1 | |||
4,482,460 | + | -0.9 | |||
4,482,494 | + | +0.6 | |||
4,482,582 | - | -1.2 | |||
4,482,650 | + | pepA | b4260 | 0.12 | +0.3 |
4,482,690 | - | pepA | b4260 | 0.15 | -0.5 |
4,482,698 | - | pepA | b4260 | 0.16 | -0.3 |
4,482,706 | + | +1.0 | |||
4,482,706 | + | +2.0 | |||
4,482,726 | - | pepA | b4260 | 0.17 | -0.6 |
4,482,741 | + | pepA | b4260 | 0.18 | +0.2 |
4,482,749 | - | pepA | b4260 | 0.19 | -0.8 |
4,482,749 | - | pepA | b4260 | 0.19 | -1.6 |
4,482,749 | - | pepA | b4260 | 0.19 | +0.3 |
4,482,787 | + | pepA | b4260 | 0.21 | +1.0 |
4,482,787 | + | pepA | b4260 | 0.21 | -1.0 |
4,482,800 | - | pepA | b4260 | 0.22 | +0.9 |
4,482,805 | - | pepA | b4260 | 0.23 | -0.7 |
4,482,822 | + | pepA | b4260 | 0.24 | +1.4 |
4,482,822 | + | pepA | b4260 | 0.24 | -1.0 |
4,482,822 | + | pepA | b4260 | 0.24 | +1.4 |
4,482,822 | + | pepA | b4260 | 0.24 | +1.4 |
4,482,883 | + | pepA | b4260 | 0.28 | +1.0 |
4,482,900 | + | pepA | b4260 | 0.29 | -0.2 |
4,482,900 | + | pepA | b4260 | 0.29 | +2.6 |
4,482,900 | + | pepA | b4260 | 0.29 | -0.6 |
4,482,900 | + | pepA | b4260 | 0.29 | +0.5 |
4,482,900 | + | pepA | b4260 | 0.29 | +1.7 |
4,482,908 | - | pepA | b4260 | 0.29 | +0.8 |
4,482,920 | + | pepA | b4260 | 0.30 | +1.4 |
4,482,959 | - | pepA | b4260 | 0.33 | +0.1 |
4,482,964 | - | pepA | b4260 | 0.33 | -2.0 |
4,482,964 | - | pepA | b4260 | 0.33 | -1.9 |
4,482,977 | + | pepA | b4260 | 0.34 | -0.6 |
4,482,977 | + | pepA | b4260 | 0.34 | +0.4 |
4,482,985 | - | pepA | b4260 | 0.35 | -0.7 |
4,483,056 | - | pepA | b4260 | 0.39 | -0.2 |
4,483,056 | - | pepA | b4260 | 0.39 | -0.7 |
4,483,122 | + | pepA | b4260 | 0.44 | -0.3 |
4,483,150 | + | pepA | b4260 | 0.45 | -2.0 |
4,483,158 | - | pepA | b4260 | 0.46 | -0.6 |
4,483,169 | - | pepA | b4260 | 0.47 | +0.0 |
4,483,179 | + | pepA | b4260 | 0.47 | +0.7 |
4,483,376 | + | pepA | b4260 | 0.60 | +1.0 |
4,483,445 | - | pepA | b4260 | 0.65 | -0.4 |
4,483,447 | + | pepA | b4260 | 0.65 | +0.0 |
4,483,447 | + | pepA | b4260 | 0.65 | +1.2 |
4,483,455 | - | pepA | b4260 | 0.66 | +0.0 |
4,483,455 | - | pepA | b4260 | 0.66 | -2.1 |
4,483,455 | - | pepA | b4260 | 0.66 | -0.5 |
4,483,455 | - | pepA | b4260 | 0.66 | +0.0 |
4,483,489 | - | pepA | b4260 | 0.68 | -1.2 |
4,483,494 | - | pepA | b4260 | 0.68 | +1.0 |
4,483,513 | - | pepA | b4260 | 0.69 | +1.3 |
4,483,601 | + | pepA | b4260 | 0.75 | +2.0 |
4,483,601 | + | pepA | b4260 | 0.75 | -0.8 |
4,483,601 | + | pepA | b4260 | 0.75 | +0.3 |
4,483,607 | - | pepA | b4260 | 0.76 | -0.1 |
4,483,627 | + | pepA | b4260 | 0.77 | +0.0 |
4,483,660 | - | pepA | b4260 | 0.79 | -0.4 |
4,483,660 | - | pepA | b4260 | 0.79 | -0.6 |
4,483,661 | - | pepA | b4260 | 0.79 | +0.0 |
4,483,661 | - | pepA | b4260 | 0.79 | -0.6 |
4,483,667 | + | pepA | b4260 | 0.80 | -0.3 |
4,483,670 | - | pepA | b4260 | 0.80 | +0.7 |
4,483,707 | - | pepA | b4260 | 0.82 | -0.6 |
4,483,708 | + | pepA | b4260 | 0.82 | +0.0 |
4,483,708 | + | pepA | b4260 | 0.82 | +1.4 |
4,483,709 | + | pepA | b4260 | 0.82 | -0.8 |
4,483,717 | + | pepA | b4260 | 0.83 | -1.6 |
4,483,717 | + | pepA | b4260 | 0.83 | +1.8 |
4,483,787 | - | pepA | b4260 | 0.88 | -0.5 |
4,483,841 | + | -0.8 | |||
4,483,841 | + | +0.0 | |||
4,483,875 | + | +0.7 | |||
4,483,875 | + | -1.3 | |||
4,483,883 | - | +0.7 | |||
4,483,910 | - | +0.3 | |||
4,483,931 | + | -1.7 | |||
4,483,993 | - | -0.4 | |||
4,484,039 | - | +0.6 | |||
4,484,062 | - | +0.0 | |||
4,484,062 | - | +0.1 | |||
4,484,119 | - | +1.0 | |||
4,484,161 | + | -1.0 |
Or see this region's nucleotide sequence