Strain Fitness in Escherichia coli BW25113 around b4226
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
4,446,166 | + | ytfP | b4222 | 0.73 | +0.7 |
4,446,166 | + | ytfP | b4222 | 0.73 | +1.2 |
4,446,166 | + | ytfP | b4222 | 0.73 | +0.4 |
4,446,176 | + | ytfP | b4222 | 0.76 | +0.1 |
4,446,176 | - | ytfP | b4222 | 0.76 | +1.6 |
4,446,176 | - | ytfP | b4222 | 0.76 | +0.0 |
4,446,176 | - | ytfP | b4222 | 0.76 | +0.8 |
4,446,184 | - | ytfP | b4222 | 0.78 | +1.2 |
4,446,184 | - | ytfP | b4222 | 0.78 | +1.6 |
4,446,240 | + | +1.4 | |||
4,446,259 | + | +0.3 | |||
4,446,260 | + | -0.3 | |||
4,446,272 | - | -0.6 | |||
4,446,273 | - | -1.3 | |||
4,446,273 | - | +2.6 | |||
4,446,375 | - | -1.4 | |||
4,446,454 | + | +1.0 | |||
4,446,454 | + | -0.4 | |||
4,446,496 | + | chpS | b4224 | 0.10 | +0.2 |
4,446,501 | + | chpS | b4224 | 0.12 | +0.3 |
4,446,501 | + | chpS | b4224 | 0.12 | +0.3 |
4,446,509 | - | chpS | b4224 | 0.15 | -0.8 |
4,446,509 | - | chpS | b4224 | 0.15 | +1.0 |
4,446,514 | - | chpS | b4224 | 0.17 | +0.2 |
4,446,559 | + | chpS | b4224 | 0.35 | +1.0 |
4,446,569 | - | chpS | b4224 | 0.39 | +1.8 |
4,446,569 | - | chpS | b4224 | 0.39 | +0.3 |
4,446,646 | - | chpS | b4224 | 0.70 | +2.0 |
4,446,652 | - | chpS | b4224 | 0.72 | +0.5 |
4,446,746 | + | -1.0 | |||
4,446,777 | + | chpB | b4225 | 0.18 | +0.0 |
4,446,787 | + | chpB | b4225 | 0.21 | +0.0 |
4,446,787 | + | chpB | b4225 | 0.21 | +0.6 |
4,446,787 | - | chpB | b4225 | 0.21 | +0.3 |
4,446,787 | - | chpB | b4225 | 0.21 | -0.5 |
4,446,794 | + | chpB | b4225 | 0.23 | -0.8 |
4,446,910 | + | chpB | b4225 | 0.56 | -0.1 |
4,446,916 | - | chpB | b4225 | 0.57 | +0.2 |
4,446,945 | + | chpB | b4225 | 0.66 | +0.0 |
4,446,949 | - | chpB | b4225 | 0.67 | -0.1 |
4,446,960 | + | chpB | b4225 | 0.70 | +1.3 |
4,447,006 | - | chpB | b4225 | 0.83 | +0.2 |
4,447,006 | - | chpB | b4225 | 0.83 | -0.1 |
4,447,057 | + | +0.5 | |||
4,447,060 | + | -1.0 | |||
4,447,060 | + | -0.7 | |||
4,447,779 | + | +2.4 | |||
4,447,787 | + | -1.3 | |||
4,447,792 | + | +0.0 | |||
4,447,795 | - | -2.3 | |||
4,447,795 | - | +0.7 | |||
4,447,797 | + | +0.0 | |||
4,447,970 | + | +0.7 | |||
4,447,978 | - | +0.5 | |||
4,447,983 | - | +0.0 | |||
4,447,983 | - | -1.0 | |||
4,448,010 | + | +1.0 | |||
4,448,039 | + | -0.3 | |||
4,448,039 | - | +0.4 | |||
4,448,345 | + | ytfQ | b4227 | 0.38 | -2.1 |
4,448,347 | + | ytfQ | b4227 | 0.38 | -0.4 |
4,448,429 | + | ytfQ | b4227 | 0.46 | +0.0 |
4,448,429 | + | ytfQ | b4227 | 0.46 | +1.0 |
4,448,452 | + | ytfQ | b4227 | 0.49 | +1.0 |
4,448,538 | + | ytfQ | b4227 | 0.58 | +0.2 |
4,448,630 | + | ytfQ | b4227 | 0.67 | +1.0 |
4,448,630 | + | ytfQ | b4227 | 0.67 | +0.5 |
4,448,630 | + | ytfQ | b4227 | 0.67 | -0.3 |
4,448,630 | + | ytfQ | b4227 | 0.67 | +0.0 |
4,448,653 | + | ytfQ | b4227 | 0.70 | -0.4 |
4,448,675 | + | ytfQ | b4227 | 0.72 | -0.2 |
Or see this region's nucleotide sequence