Strain Fitness in Escherichia coli BW25113 around b3061

Experiment: 2-Furfuraldehyde 0.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Furfuraldehyde 0.25 vol%
3,203,507	+	ygiP	b3060	0.17	-1.2
3,203,525	-	ygiP	b3060	0.19	+0.2
3,203,531	+	ygiP	b3060	0.20	-0.5
3,203,560	-	ygiP	b3060	0.23	+0.3
3,203,560	-	ygiP	b3060	0.23	-0.9
3,203,580	+	ygiP	b3060	0.25	-1.1
3,203,609	+	ygiP	b3060	0.28	+1.2
3,203,609	-	ygiP	b3060	0.28	-1.0
3,203,609	-	ygiP	b3060	0.28	+1.0
3,203,617	+	ygiP	b3060	0.29	-0.2
3,203,617	-	ygiP	b3060	0.29	+0.4
3,203,617	-	ygiP	b3060	0.29	+1.6
3,203,618	+	ygiP	b3060	0.29	+1.0
3,203,618	+	ygiP	b3060	0.29	+0.6
3,203,626	-	ygiP	b3060	0.30	+0.5
3,203,642	+	ygiP	b3060	0.32	-0.7
3,203,642	+	ygiP	b3060	0.32	+0.4
3,203,650	+	ygiP	b3060	0.33	-0.6
3,203,650	+	ygiP	b3060	0.33	-1.0
3,203,666	+	ygiP	b3060	0.34	-0.4
3,203,666	+	ygiP	b3060	0.34	-0.8
3,203,673	+	ygiP	b3060	0.35	-0.6
3,203,674	+	ygiP	b3060	0.35	+1.0
3,203,674	+	ygiP	b3060	0.35	+0.6
3,203,674	-	ygiP	b3060	0.35	+0.7
3,203,674	-	ygiP	b3060	0.35	-0.3
3,203,674	-	ygiP	b3060	0.35	+1.0
3,203,677	+	ygiP	b3060	0.35	+0.0
3,203,682	-	ygiP	b3060	0.36	-0.9
3,203,685	+	ygiP	b3060	0.36	+1.0
3,203,685	+	ygiP	b3060	0.36	+0.0
3,203,685	+	ygiP	b3060	0.36	+0.6
3,203,685	+	ygiP	b3060	0.36	-0.3
3,203,689	+	ygiP	b3060	0.37	+1.7
3,203,689	+	ygiP	b3060	0.37	+0.7
3,203,695	+	ygiP	b3060	0.37	+0.0
3,203,695	-	ygiP	b3060	0.37	-0.2
3,203,696	+	ygiP	b3060	0.38	+0.5
3,203,698	+	ygiP	b3060	0.38	+0.0
3,203,698	+	ygiP	b3060	0.38	+0.5
3,203,712	+	ygiP	b3060	0.39	+0.9
3,203,720	+	ygiP	b3060	0.40	+1.4
3,203,720	+	ygiP	b3060	0.40	+0.2
3,203,720	+	ygiP	b3060	0.40	+1.0
3,203,721	+	ygiP	b3060	0.40	-2.0
3,203,728	-	ygiP	b3060	0.41	+0.3
3,203,728	-	ygiP	b3060	0.41	+0.8
3,203,755	+	ygiP	b3060	0.44	+1.1
3,203,757	+	ygiP	b3060	0.44	+1.2
3,203,757	+	ygiP	b3060	0.44	-0.0
3,203,861	-	ygiP	b3060	0.55	-0.7
3,203,861	-	ygiP	b3060	0.55	-0.3
3,203,907	-	ygiP	b3060	0.60	+1.5
3,203,907	-	ygiP	b3060	0.60	-1.0
3,203,908	-	ygiP	b3060	0.60	-1.8
3,203,908	-	ygiP	b3060	0.60	-0.7
3,203,919	-	ygiP	b3060	0.61	+0.3
3,203,919	-	ygiP	b3060	0.61	+0.3
3,203,927	+	ygiP	b3060	0.62	-1.5
3,203,932	-	ygiP	b3060	0.63	-0.1
3,203,932	-	ygiP	b3060	0.63	-1.1
3,203,933	-	ygiP	b3060	0.63	+0.0
3,203,933	-	ygiP	b3060	0.63	+1.6
3,203,935	-	ygiP	b3060	0.63	+1.5
3,203,935	-	ygiP	b3060	0.63	+0.8
3,203,940	-	ygiP	b3060	0.64	+0.4
3,203,940	-	ygiP	b3060	0.64	+0.0
3,203,940	-	ygiP	b3060	0.64	+0.2
3,203,940	-	ygiP	b3060	0.64	-1.0
3,203,947	+	ygiP	b3060	0.64	+0.2
3,203,947	+	ygiP	b3060	0.64	-2.2
3,203,947	+	ygiP	b3060	0.64	+0.4
3,203,947	+	ygiP	b3060	0.64	-1.3
3,203,953	-	ygiP	b3060	0.65	-0.8
3,203,953	-	ygiP	b3060	0.65	+0.1
3,203,953	-	ygiP	b3060	0.65	-0.1
3,203,953	-	ygiP	b3060	0.65	+0.0
3,203,953	-	ygiP	b3060	0.65	-0.5
3,203,953	-	ygiP	b3060	0.65	+0.3
3,203,953	-	ygiP	b3060	0.65	-0.4
3,203,953	-	ygiP	b3060	0.65	+0.7
3,203,955	-	ygiP	b3060	0.65	-0.6
3,203,986	-	ygiP	b3060	0.69	+1.3
3,203,986	-	ygiP	b3060	0.69	+0.0
3,203,987	-	ygiP	b3060	0.69	+1.0
3,203,987	-	ygiP	b3060	0.69	-0.4
3,203,987	-	ygiP	b3060	0.69	+1.0
3,204,012	-	ygiP	b3060	0.71	+0.2
3,204,012	-	ygiP	b3060	0.71	+0.1
3,204,021	-	ygiP	b3060	0.72	+0.3
3,204,021	-	ygiP	b3060	0.72	+0.1
3,204,021	-	ygiP	b3060	0.72	+0.0
3,204,022	-	ygiP	b3060	0.72	+2.0
3,204,022	-	ygiP	b3060	0.72	+0.8
3,204,023	-	ygiP	b3060	0.73	+0.2
3,204,029	-	ygiP	b3060	0.73	+0.1
3,204,034	-	ygiP	b3060	0.74	+2.2
3,204,046	-	ygiP	b3060	0.75	-1.0
3,204,085	+	ygiP	b3060	0.79	-0.8
3,204,093	-	ygiP	b3060	0.80	+0.4
3,204,117	+	ygiP	b3060	0.83	+0.2
3,204,173	+	ygiP	b3060	0.89	+0.2
3,204,202	-				-0.6
3,204,202	-				+0.6
3,204,257	+				-1.8
3,204,263	-				-1.3
3,204,270	-				+0.0
3,204,275	-				-1.0
3,204,278	-				-0.4
3,204,294	+				+0.1
3,204,294	+				-1.8
3,204,294	+				+0.0
3,204,302	-				+0.0
3,204,302	-				+0.1
3,204,316	+				+0.4
3,204,319	-				+1.6
3,204,392	+				+0.0
3,204,394	-				+0.3
3,204,394	-				-1.0
3,204,490	-				+0.5
3,204,490	-				-1.6
3,204,506	-				-0.7
3,204,506	-				+1.0
3,204,525	-				-0.4
3,204,525	-				+0.6
3,204,530	+				+0.6
3,204,572	+				+0.2
3,204,572	+				+0.0
3,204,572	+				+0.0
3,204,573	+				+0.8
3,204,573	+				+0.1
3,204,579	-	ttdA	b3061	0.10	-1.0
3,204,579	-	ttdA	b3061	0.10	+0.4
3,204,580	-	ttdA	b3061	0.10	+0.6
3,204,580	-	ttdA	b3061	0.10	-0.4
3,204,581	-	ttdA	b3061	0.11	+0.2
3,204,581	-	ttdA	b3061	0.11	+0.2
3,204,584	+	ttdA	b3061	0.11	+1.5
3,204,586	+	ttdA	b3061	0.11	+1.4
3,204,591	+	ttdA	b3061	0.12	+2.2
3,204,615	-	ttdA	b3061	0.14	+0.1
3,204,615	-	ttdA	b3061	0.14	+2.0
3,204,619	+	ttdA	b3061	0.15	+0.0
3,204,642	+	ttdA	b3061	0.17	+0.4
3,204,650	-	ttdA	b3061	0.18	+0.8
3,204,668	-	ttdA	b3061	0.20	-0.2
3,204,668	-	ttdA	b3061	0.20	+1.9
3,204,668	-	ttdA	b3061	0.20	+0.4
3,204,685	-	ttdA	b3061	0.22	+0.4
3,204,685	-	ttdA	b3061	0.22	+1.0
3,204,685	-	ttdA	b3061	0.22	+0.6
3,204,685	-	ttdA	b3061	0.22	+0.0
3,204,710	-	ttdA	b3061	0.25	+1.0
3,204,721	-	ttdA	b3061	0.26	-0.4
3,204,852	-	ttdA	b3061	0.40	+0.0
3,204,852	-	ttdA	b3061	0.40	-0.2
3,204,852	-	ttdA	b3061	0.40	+0.3
3,204,852	-	ttdA	b3061	0.40	+1.3
3,204,888	+	ttdA	b3061	0.44	+0.0
3,204,895	-	ttdA	b3061	0.45	+0.8
3,204,895	-	ttdA	b3061	0.45	+1.0
3,204,896	-	ttdA	b3061	0.45	+0.6
3,204,953	+	ttdA	b3061	0.51	+1.0
3,204,982	-	ttdA	b3061	0.54	-0.4
3,205,061	+	ttdA	b3061	0.63	+0.2
3,205,185	+	ttdA	b3061	0.77	+0.4
3,205,185	+	ttdA	b3061	0.77	+0.5
3,205,222	-	ttdA	b3061	0.81	+0.9
3,205,252	-	ttdA	b3061	0.84	+1.0
3,205,252	-	ttdA	b3061	0.84	+1.6
3,205,293	+	ttdA	b3061	0.89	+0.7
3,205,296	+	ttdA	b3061	0.89	-0.8
3,205,296	+	ttdA	b3061	0.89	+0.7
3,205,345	-				+0.8
3,205,345	-				-1.1
3,205,372	+				-1.1
3,205,380	-				+0.3
3,205,401	-				+0.4
3,205,495	-	ttdB	b3062	0.17	+0.6
3,205,627	-	ttdB	b3062	0.39	-1.0
3,205,783	-	ttdB	b3062	0.64	-0.2
3,205,823	-	ttdB	b3062	0.71	+0.3
3,205,823	-	ttdB	b3062	0.71	+1.6
3,205,846	+	ttdB	b3062	0.75	+0.0
3,205,846	+	ttdB	b3062	0.75	-2.6
3,206,003	+				+0.5
3,206,011	-				-1.1
3,206,011	-				-1.1
3,206,046	+				+0.2
3,206,046	+				+1.0
3,206,068	+				-0.3
3,206,084	+				+0.2
3,206,155	-				-0.6
3,206,155	-				-0.4
3,206,233	-	ygjE	b3063	0.13	+1.6
3,206,241	+	ygjE	b3063	0.13	-0.0
3,206,251	+	ygjE	b3063	0.14	-0.1
3,206,259	-	ygjE	b3063	0.15	+0.0
3,206,264	+	ygjE	b3063	0.15	-0.8