Strain Fitness in Escherichia coli BW25113 around b2914
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
3,055,708 | + | serA | b2913 | 0.41 | +0.3 |
3,055,745 | + | serA | b2913 | 0.44 | +0.3 |
3,055,745 | + | serA | b2913 | 0.44 | +1.1 |
3,055,749 | - | serA | b2913 | 0.45 | -0.7 |
3,055,749 | - | serA | b2913 | 0.45 | +1.1 |
3,055,802 | - | serA | b2913 | 0.49 | +0.8 |
3,055,843 | - | serA | b2913 | 0.52 | +0.4 |
3,055,850 | + | serA | b2913 | 0.53 | +0.1 |
3,055,869 | - | serA | b2913 | 0.54 | -0.2 |
3,056,013 | + | serA | b2913 | 0.66 | +1.2 |
3,056,118 | + | serA | b2913 | 0.74 | -0.7 |
3,056,118 | - | serA | b2913 | 0.74 | +0.1 |
3,056,132 | - | serA | b2913 | 0.76 | -0.3 |
3,056,132 | - | serA | b2913 | 0.76 | -0.0 |
3,056,177 | + | serA | b2913 | 0.79 | +0.6 |
3,056,177 | + | serA | b2913 | 0.79 | +1.1 |
3,056,253 | - | serA | b2913 | 0.85 | -0.4 |
3,056,345 | + | -1.2 | |||
3,056,388 | - | +0.1 | |||
3,056,487 | - | -0.1 | |||
3,056,551 | - | -0.4 | |||
3,056,578 | + | +0.1 | |||
3,056,600 | - | +0.1 | |||
3,056,617 | + | +0.1 | |||
3,057,409 | - | -0.2 | |||
3,057,496 | - | yqfE | b2915 | 0.29 | +0.1 |
3,057,496 | - | yqfE | b2915 | 0.29 | +0.6 |
3,057,502 | + | yqfE | b2915 | 0.31 | +1.2 |
3,057,505 | - | yqfE | b2915 | 0.32 | +0.6 |
3,057,598 | - | yqfE | b2915 | 0.61 | +0.9 |
3,057,705 | + | +0.4 | |||
3,057,712 | - | +0.1 | |||
3,057,927 | + | argP | b2916 | 0.17 | +0.1 |
3,057,989 | + | argP | b2916 | 0.24 | +0.4 |
3,057,989 | + | argP | b2916 | 0.24 | -0.6 |
3,058,012 | - | argP | b2916 | 0.27 | -1.3 |
3,058,012 | - | argP | b2916 | 0.27 | +1.1 |
3,058,242 | + | argP | b2916 | 0.52 | +0.6 |
3,058,275 | - | argP | b2916 | 0.56 | +0.1 |
3,058,275 | - | argP | b2916 | 0.56 | +0.1 |
3,058,275 | - | argP | b2916 | 0.56 | +0.5 |
Or see this region's nucleotide sequence