Strain Fitness in Escherichia coli BW25113 around b2744
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
2,866,658 | + | nlpD | b2742 | 0.90 | +0.6 |
2,866,722 | - | -1.1 | |||
2,866,836 | - | -1.6 | |||
2,866,998 | + | pcm | b2743 | 0.13 | -0.3 |
2,867,354 | + | pcm | b2743 | 0.70 | +0.3 |
2,867,354 | + | pcm | b2743 | 0.70 | +2.4 |
2,867,354 | + | pcm | b2743 | 0.70 | +0.5 |
2,867,354 | + | pcm | b2743 | 0.70 | +0.5 |
2,867,354 | + | pcm | b2743 | 0.70 | -0.2 |
2,867,359 | - | pcm | b2743 | 0.71 | +0.6 |
2,867,541 | - | -1.5 | |||
2,867,541 | - | +0.3 | |||
2,867,616 | - | surE | b2744 | 0.11 | -1.8 |
2,867,623 | + | surE | b2744 | 0.12 | +0.1 |
2,867,631 | + | surE | b2744 | 0.13 | +0.3 |
2,867,672 | - | surE | b2744 | 0.18 | -1.9 |
2,867,701 | + | surE | b2744 | 0.22 | +1.1 |
2,867,709 | - | surE | b2744 | 0.23 | -2.6 |
2,867,747 | + | surE | b2744 | 0.28 | -1.9 |
2,867,747 | + | surE | b2744 | 0.28 | -0.5 |
2,867,862 | - | surE | b2744 | 0.43 | -3.6 |
2,867,862 | - | surE | b2744 | 0.43 | -1.3 |
2,867,862 | - | surE | b2744 | 0.43 | -1.3 |
2,867,883 | + | surE | b2744 | 0.46 | -0.3 |
2,867,883 | + | surE | b2744 | 0.46 | +0.1 |
2,868,038 | - | surE | b2744 | 0.66 | -0.7 |
2,868,043 | - | surE | b2744 | 0.67 | +0.2 |
2,868,043 | - | surE | b2744 | 0.67 | -0.4 |
2,868,152 | + | surE | b2744 | 0.81 | +0.1 |
2,868,266 | - | +1.6 | |||
2,868,284 | + | +0.1 | |||
2,868,332 | - | -0.1 | |||
2,868,421 | - | truD | b2745 | 0.14 | -0.9 |
2,868,647 | + | truD | b2745 | 0.35 | -0.3 |
2,868,647 | - | truD | b2745 | 0.35 | -0.3 |
2,868,744 | + | truD | b2745 | 0.44 | +1.8 |
2,868,779 | + | truD | b2745 | 0.48 | -0.5 |
2,868,779 | + | truD | b2745 | 0.48 | -0.0 |
2,868,785 | - | truD | b2745 | 0.48 | +0.6 |
2,868,785 | - | truD | b2745 | 0.48 | +0.7 |
2,868,791 | + | truD | b2745 | 0.49 | +0.7 |
2,868,845 | - | truD | b2745 | 0.54 | +0.2 |
2,868,845 | - | truD | b2745 | 0.54 | -0.3 |
2,868,930 | + | truD | b2745 | 0.62 | -0.4 |
2,868,930 | + | truD | b2745 | 0.62 | +1.1 |
2,868,986 | + | truD | b2745 | 0.68 | +1.1 |
2,868,986 | + | truD | b2745 | 0.68 | -1.3 |
2,868,996 | - | truD | b2745 | 0.68 | -0.2 |
2,869,037 | + | truD | b2745 | 0.72 | +0.1 |
2,869,118 | - | truD | b2745 | 0.80 | +2.6 |
2,869,118 | - | truD | b2745 | 0.80 | -1.5 |
2,869,194 | + | truD | b2745 | 0.87 | +1.8 |
2,869,194 | + | truD | b2745 | 0.87 | +1.0 |
2,869,292 | - | -1.5 |
Or see this region's nucleotide sequence