Strain Fitness in Escherichia coli BW25113 around b2121
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
2,205,010 | - | yehM | b2120 | 0.57 | +0.5 |
2,205,376 | + | yehM | b2120 | 0.73 | -0.8 |
2,205,376 | + | yehM | b2120 | 0.73 | +0.0 |
2,205,376 | + | yehM | b2120 | 0.73 | +0.0 |
2,205,384 | + | yehM | b2120 | 0.73 | +0.7 |
2,205,384 | + | yehM | b2120 | 0.73 | +0.1 |
2,205,492 | - | yehM | b2120 | 0.78 | +0.4 |
2,205,492 | - | yehM | b2120 | 0.78 | +0.7 |
2,205,625 | + | yehM | b2120 | 0.84 | -0.4 |
2,205,802 | + | -0.1 | |||
2,205,919 | - | +0.7 | |||
2,205,958 | + | -0.8 | |||
2,206,144 | + | yehP | b2121 | 0.14 | -0.1 |
2,206,144 | - | yehP | b2121 | 0.14 | +0.2 |
2,206,144 | - | yehP | b2121 | 0.14 | +0.9 |
2,206,189 | + | yehP | b2121 | 0.18 | +0.2 |
2,206,202 | - | yehP | b2121 | 0.19 | +0.2 |
2,206,257 | - | yehP | b2121 | 0.24 | -0.3 |
2,206,257 | - | yehP | b2121 | 0.24 | -1.8 |
2,206,296 | - | yehP | b2121 | 0.27 | -0.5 |
2,206,390 | - | yehP | b2121 | 0.35 | -0.2 |
2,206,390 | - | yehP | b2121 | 0.35 | -0.5 |
2,206,547 | + | yehP | b2121 | 0.49 | -0.7 |
2,206,547 | + | yehP | b2121 | 0.49 | -0.6 |
2,206,609 | + | yehP | b2121 | 0.55 | +0.1 |
2,206,686 | + | yehP | b2121 | 0.61 | -1.1 |
2,206,776 | - | yehP | b2121 | 0.69 | +0.9 |
2,206,809 | + | yehP | b2121 | 0.72 | +0.9 |
2,206,809 | + | yehP | b2121 | 0.72 | -1.4 |
2,206,824 | - | yehP | b2121 | 0.73 | -0.4 |
2,206,855 | - | yehP | b2121 | 0.76 | -1.4 |
2,207,171 | - | +0.3 | |||
2,207,171 | - | +1.5 | |||
2,207,253 | - | -0.5 | |||
2,207,469 | + | yehQ | b2122 | 0.17 | -0.6 |
2,207,500 | - | yehQ | b2122 | 0.19 | +2.2 |
2,207,524 | + | yehQ | b2122 | 0.20 | +0.1 |
2,207,629 | + | yehQ | b2122 | 0.25 | -0.3 |
2,207,682 | - | yehQ | b2122 | 0.28 | +0.1 |
2,207,949 | - | yehQ | b2122 | 0.41 | -1.9 |
2,208,004 | + | yehQ | b2122 | 0.44 | -1.2 |
2,208,048 | + | yehQ | b2122 | 0.46 | -0.6 |
2,208,088 | + | yehQ | b2122 | 0.48 | -0.2 |
2,208,096 | - | yehQ | b2122 | 0.49 | -1.0 |
Or see this region's nucleotide sequence