Strain Fitness in Escherichia coli BW25113 around b1692
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,770,858 | - | ydiN | b1691 | 0.25 | +0.4 |
1,770,860 | - | ydiN | b1691 | 0.26 | +0.7 |
1,770,860 | - | ydiN | b1691 | 0.26 | -0.9 |
1,770,870 | - | ydiN | b1691 | 0.26 | +0.8 |
1,770,870 | - | ydiN | b1691 | 0.26 | -0.8 |
1,770,870 | - | ydiN | b1691 | 0.26 | -2.9 |
1,770,882 | - | ydiN | b1691 | 0.27 | +1.0 |
1,770,906 | - | ydiN | b1691 | 0.29 | +0.4 |
1,771,124 | + | ydiN | b1691 | 0.46 | -0.5 |
1,771,160 | + | ydiN | b1691 | 0.49 | +0.8 |
1,771,195 | + | ydiN | b1691 | 0.52 | -0.2 |
1,771,269 | + | ydiN | b1691 | 0.58 | +0.9 |
1,771,273 | + | ydiN | b1691 | 0.58 | -1.2 |
1,771,273 | + | ydiN | b1691 | 0.58 | -0.7 |
1,771,273 | + | ydiN | b1691 | 0.58 | +0.8 |
1,771,311 | + | ydiN | b1691 | 0.61 | -1.0 |
1,771,560 | + | ydiN | b1691 | 0.81 | -0.2 |
1,771,564 | + | ydiN | b1691 | 0.81 | -0.5 |
1,771,571 | + | ydiN | b1691 | 0.82 | +1.4 |
1,771,571 | + | ydiN | b1691 | 0.82 | -1.2 |
1,771,859 | - | +1.5 | |||
1,771,864 | - | +1.8 | |||
1,771,927 | - | ydiB | b1692 | 0.13 | -1.7 |
1,771,950 | - | ydiB | b1692 | 0.16 | +0.8 |
1,771,957 | - | ydiB | b1692 | 0.17 | +0.8 |
1,771,957 | - | ydiB | b1692 | 0.17 | -0.7 |
1,771,964 | - | ydiB | b1692 | 0.17 | +0.2 |
1,772,008 | - | ydiB | b1692 | 0.22 | -0.2 |
1,772,113 | + | ydiB | b1692 | 0.35 | +1.6 |
1,772,113 | + | ydiB | b1692 | 0.35 | -0.1 |
1,772,121 | + | ydiB | b1692 | 0.36 | +0.5 |
1,772,148 | - | ydiB | b1692 | 0.39 | -0.5 |
1,772,163 | - | ydiB | b1692 | 0.40 | -0.0 |
1,772,207 | - | ydiB | b1692 | 0.45 | +0.8 |
1,772,207 | - | ydiB | b1692 | 0.45 | -0.2 |
1,772,610 | - | -0.4 | |||
1,772,623 | - | +0.8 | |||
1,772,623 | - | +0.8 | |||
1,772,882 | - | aroD | b1693 | 0.23 | -0.6 |
1,772,959 | + | aroD | b1693 | 0.33 | +0.8 |
1,772,959 | + | aroD | b1693 | 0.33 | -0.8 |
1,773,012 | - | aroD | b1693 | 0.40 | +1.2 |
1,773,094 | + | aroD | b1693 | 0.51 | +0.8 |
1,773,094 | + | aroD | b1693 | 0.51 | -2.0 |
1,773,181 | - | aroD | b1693 | 0.62 | -1.3 |
1,773,181 | - | aroD | b1693 | 0.62 | +0.1 |
1,773,228 | - | aroD | b1693 | 0.68 | +0.3 |
1,773,239 | + | aroD | b1693 | 0.70 | -0.8 |
1,773,247 | - | aroD | b1693 | 0.71 | -0.8 |
1,773,247 | - | aroD | b1693 | 0.71 | -0.5 |
1,773,271 | + | aroD | b1693 | 0.74 | -1.8 |
1,773,272 | + | aroD | b1693 | 0.74 | -1.8 |
1,773,279 | - | aroD | b1693 | 0.75 | -0.8 |
1,773,291 | + | aroD | b1693 | 0.77 | -1.5 |
1,773,440 | + | -0.2 | |||
1,773,440 | + | +0.4 | |||
1,773,442 | + | -0.2 | |||
1,773,442 | + | -1.0 | |||
1,773,641 | - | -0.2 | |||
1,773,665 | - | +0.0 |
Or see this region's nucleotide sequence