Strain Fitness in Escherichia coli BW25113 around b1296
Experiment: 2-Furfuraldehyde 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,354,915 | - | sapA | b1294 | 0.87 | +0.5 |
1,354,915 | - | sapA | b1294 | 0.87 | +1.3 |
1,354,998 | - | +2.6 | |||
1,355,215 | + | +0.2 | |||
1,355,225 | - | +0.8 | |||
1,355,225 | - | -0.8 | |||
1,355,370 | - | -2.2 | |||
1,355,370 | - | +0.8 | |||
1,355,445 | - | -1.1 | |||
1,355,485 | + | ymjA | b1295 | 0.15 | +0.8 |
1,355,488 | - | ymjA | b1295 | 0.17 | +0.8 |
1,355,488 | - | ymjA | b1295 | 0.17 | -1.0 |
1,355,507 | - | ymjA | b1295 | 0.24 | -0.2 |
1,355,713 | - | +1.2 | |||
1,355,723 | - | -0.3 | |||
1,355,726 | - | -0.8 | |||
1,355,728 | - | +0.4 | |||
1,355,853 | - | -0.4 | |||
1,355,862 | + | -0.3 | |||
1,356,256 | + | ycjJ | b1296 | 0.31 | +0.8 |
1,356,736 | - | ycjJ | b1296 | 0.66 | +1.6 |
1,356,934 | - | ycjJ | b1296 | 0.80 | -0.8 |
1,356,934 | - | ycjJ | b1296 | 0.80 | +1.1 |
1,356,948 | + | ycjJ | b1296 | 0.81 | +3.1 |
1,356,948 | + | ycjJ | b1296 | 0.81 | +0.1 |
1,356,949 | + | ycjJ | b1296 | 0.81 | +0.5 |
1,356,949 | + | ycjJ | b1296 | 0.81 | +0.8 |
1,357,116 | - | +0.5 | |||
1,357,116 | - | +0.7 | |||
1,357,150 | + | +1.7 | |||
1,357,189 | - | +0.6 | |||
1,357,489 | - | +1.4 | |||
1,357,696 | - | b1297 | b1297 | 0.13 | -0.2 |
1,357,696 | - | b1297 | b1297 | 0.13 | +0.8 |
1,357,820 | + | b1297 | b1297 | 0.22 | +0.8 |
1,357,845 | - | b1297 | b1297 | 0.23 | +2.4 |
1,357,845 | - | b1297 | b1297 | 0.23 | +1.4 |
1,357,898 | - | b1297 | b1297 | 0.27 | +0.2 |
Or see this region's nucleotide sequence