Strain Fitness in Escherichia coli BW25113 around b0407
Experiment: 2-Furfuraldehyde 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.125 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 425,700 | - | tgt | b0406 | 0.30 | -0.5 |
| 425,700 | - | tgt | b0406 | 0.30 | -1.4 |
| 425,852 | - | tgt | b0406 | 0.44 | +0.7 |
| 425,914 | + | tgt | b0406 | 0.49 | -1.0 |
| 425,945 | - | tgt | b0406 | 0.52 | -1.9 |
| 425,945 | - | +0.9 | |||
| 425,964 | + | tgt | b0406 | 0.53 | -0.4 |
| 426,030 | - | tgt | b0406 | 0.59 | +1.5 |
| 426,030 | - | tgt | b0406 | 0.59 | -1.4 |
| 426,035 | - | tgt | b0406 | 0.60 | -1.4 |
| 426,035 | - | tgt | b0406 | 0.60 | -1.1 |
| 426,230 | + | tgt | b0406 | 0.77 | +0.1 |
| 426,230 | + | tgt | b0406 | 0.77 | +0.9 |
| 426,241 | + | tgt | b0406 | 0.78 | -0.1 |
| 426,249 | - | tgt | b0406 | 0.79 | -0.3 |
| 426,259 | - | tgt | b0406 | 0.80 | -0.0 |
| 426,277 | - | tgt | b0406 | 0.81 | +0.0 |
| 426,318 | - | tgt | b0406 | 0.85 | -1.0 |
| 426,352 | - | tgt | b0406 | 0.88 | -1.9 |
| 426,352 | - | tgt | b0406 | 0.88 | -0.7 |
| 426,352 | - | tgt | b0406 | 0.88 | +0.3 |
| 426,352 | - | tgt | b0406 | 0.88 | +0.9 |
| 426,405 | + | -0.0 | |||
| 426,481 | - | -1.9 | |||
| 426,561 | + | yajC | b0407 | 0.15 | -0.6 |
| 426,666 | + | yajC | b0407 | 0.47 | +1.2 |
| 426,666 | + | yajC | b0407 | 0.47 | -0.8 |
| 426,765 | + | yajC | b0407 | 0.76 | -1.1 |
| 426,765 | + | yajC | b0407 | 0.76 | -0.1 |
Or see this region's nucleotide sequence