Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_915

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,024,121	-		PfGW456L13_914	0.39	+0.6
1,024,200	+		PfGW456L13_914	0.47	-0.8
1,024,200	+		PfGW456L13_914	0.47	-1.0
1,024,200	+		PfGW456L13_914	0.47	-0.0
1,024,200	+		PfGW456L13_914	0.47	+0.8
1,024,200	+		PfGW456L13_914	0.47	-0.3
1,024,200	+		PfGW456L13_914	0.47	+0.9
1,024,201	-		PfGW456L13_914	0.47	+0.7
1,024,201	-		PfGW456L13_914	0.47	+0.8
1,024,201	-		PfGW456L13_914	0.47	+0.4
1,024,201	-		PfGW456L13_914	0.47	-1.8
1,024,201	-		PfGW456L13_914	0.47	+0.3
1,024,304	+		PfGW456L13_914	0.57	+1.2
1,024,305	-		PfGW456L13_914	0.57	+0.3
1,024,495	+		PfGW456L13_914	0.77	-0.6
1,024,495	+		PfGW456L13_914	0.77	+3.5
1,024,496	-		PfGW456L13_914	0.77	-0.2
1,024,496	-		PfGW456L13_914	0.77	+1.1
1,024,496	-		PfGW456L13_914	0.77	-0.8
1,024,679	-				-0.3
1,024,879	-				-1.5
1,024,881	+				-0.5
1,024,881	+				+1.9
1,024,882	-				+0.8
1,024,882	-				-0.1
1,024,896	+				-1.1
1,024,968	+				-1.9
1,024,969	-				-0.0
1,024,974	+				+0.1
1,024,974	+				-0.7
1,024,974	+				+0.7
1,024,974	+				+1.6
1,024,974	+				-0.4
1,024,974	+				+2.5
1,024,974	+				-0.3
1,024,974	+				+0.5
1,024,974	+				+0.5
1,024,974	+				-2.0
1,024,974	+				-0.6
1,024,974	+				+1.4
1,024,974	+				-1.1
1,024,974	+				+0.2
1,024,974	+				+1.3
1,024,974	+				+0.8
1,024,974	+				+1.7
1,024,974	+				+0.8
1,024,974	+				-0.7
1,024,974	+				-0.3
1,024,975	-				-0.7
1,024,975	-				-0.8
1,024,975	-				+0.3
1,024,975	-				+0.8
1,024,975	-				-0.3
1,024,975	-				+0.6
1,024,975	-				-1.0
1,024,975	-				-0.5
1,024,975	-				+0.3
1,024,975	-				-0.6
1,024,975	-				+0.6
1,024,975	-				-0.5
1,024,975	-				+0.7
1,024,975	-				-0.5
1,024,975	-				-1.8
1,025,014	-				+0.8
1,025,026	+				+1.5
1,025,026	+				-0.3
1,025,027	-				+0.3
1,025,058	+				-0.2
1,025,058	+				+0.4
1,025,058	+				-0.5
1,025,058	+				+0.1
1,025,059	-				+0.4
1,025,059	-				+0.8
1,025,067	+				+0.0
1,025,067	+				-0.2
1,025,067	+				+0.0
1,025,067	+				+0.7
1,025,083	+				-0.8
1,025,083	+				-0.6
1,025,083	+				-2.1
1,025,083	+				-0.6
1,025,083	+				-0.1
1,025,084	-				-1.0
1,025,084	-				+1.2
1,025,200	+				+0.9
1,025,200	+				+0.3
1,025,200	+				-1.0
1,025,200	+				+1.1
1,025,200	+				+1.3
1,025,200	+				-0.7
1,025,200	+				+0.8
1,025,200	+				-1.0
1,025,200	+				-0.0
1,025,200	+				-2.1
1,025,200	+				-0.1
1,025,200	+				-0.4
1,025,201	-				+1.0
1,025,201	-				-1.6
1,025,201	-				+0.2
1,025,201	-				+1.7
1,025,201	-				+0.5
1,025,201	-				+1.1
1,025,201	-				-1.7
1,025,201	-				+0.6
1,025,201	-				+2.5
1,025,201	-				+0.9
1,025,201	-				-0.9
1,025,203	+				-0.6
1,025,203	+				+0.5
1,025,203	+				-1.1
1,025,203	+				-1.5
1,025,203	+				-0.1
1,025,204	-				+1.3
1,025,204	-				-0.0
1,025,204	-				-2.7
1,025,204	-				-1.6
1,025,204	-				-1.2
1,025,204	-				+1.6
1,025,204	-				-0.7
1,025,204	-				+0.2
1,025,204	-				+0.2
1,025,204	-				-0.7
1,025,204	-				+0.3
1,025,204	-				+0.7
1,025,204	-				+1.9
1,025,269	+		PfGW456L13_915	0.14	-2.0
1,025,269	+		PfGW456L13_915	0.14	-0.1
1,025,269	+		PfGW456L13_915	0.14	-0.3
1,025,269	+		PfGW456L13_915	0.14	+0.5
1,025,269	+		PfGW456L13_915	0.14	-0.1
1,025,269	+		PfGW456L13_915	0.14	-0.1
1,025,269	+		PfGW456L13_915	0.14	+0.6
1,025,269	+		PfGW456L13_915	0.14	+0.4
1,025,269	+		PfGW456L13_915	0.14	+0.2
1,025,269	+		PfGW456L13_915	0.14	-1.1
1,025,269	+		PfGW456L13_915	0.14	+0.2
1,025,269	+		PfGW456L13_915	0.14	+0.8
1,025,270	-		PfGW456L13_915	0.14	-0.1
1,025,270	-		PfGW456L13_915	0.14	-2.6
1,025,270	-		PfGW456L13_915	0.14	+0.2
1,025,270	-		PfGW456L13_915	0.14	+0.6
1,025,270	-		PfGW456L13_915	0.14	+1.9
1,025,270	-		PfGW456L13_915	0.14	-0.4
1,025,271	+		PfGW456L13_915	0.14	+0.6
1,025,271	+		PfGW456L13_915	0.14	-0.1
1,025,271	+		PfGW456L13_915	0.14	-0.1
1,025,271	+		PfGW456L13_915	0.14	+0.2
1,025,271	+		PfGW456L13_915	0.14	-0.1
1,025,271	+		PfGW456L13_915	0.14	+1.8
1,025,271	+		PfGW456L13_915	0.14	+0.7
1,025,271	+		PfGW456L13_915	0.14	-1.5
1,025,272	-		PfGW456L13_915	0.14	-0.1
1,025,272	-		PfGW456L13_915	0.14	+0.3
1,025,272	-		PfGW456L13_915	0.14	+1.6
1,025,272	-		PfGW456L13_915	0.14	+0.6
1,025,272	-		PfGW456L13_915	0.14	+0.5
1,025,272	-		PfGW456L13_915	0.14	-0.1
1,025,272	-		PfGW456L13_915	0.14	+0.2
1,025,272	-		PfGW456L13_915	0.14	-0.5
1,025,272	-		PfGW456L13_915	0.14	-0.8
1,025,272	-		PfGW456L13_915	0.14	+0.8
1,025,272	-		PfGW456L13_915	0.14	-3.0
1,025,272	-		PfGW456L13_915	0.14	+0.7
1,025,272	-		PfGW456L13_915	0.14	+0.1
1,025,272	-		PfGW456L13_915	0.14	+0.9
1,025,272	-		PfGW456L13_915	0.14	+0.2
1,025,272	-		PfGW456L13_915	0.14	-0.3
1,025,680	+		PfGW456L13_915	0.44	+1.1
1,025,680	+		PfGW456L13_915	0.44	+1.1
1,025,680	+		PfGW456L13_915	0.44	+0.3
1,025,681	-		PfGW456L13_915	0.44	-1.3
1,025,681	-		PfGW456L13_915	0.44	-0.2
1,025,681	-		PfGW456L13_915	0.44	+0.5
1,025,681	-		PfGW456L13_915	0.44	-0.9
1,025,681	-		PfGW456L13_915	0.44	-1.4
1,025,681	-		PfGW456L13_915	0.44	+0.3
1,025,681	-		PfGW456L13_915	0.44	-0.1
1,025,683	+		PfGW456L13_915	0.45	+0.4
1,025,683	+		PfGW456L13_915	0.45	-0.3
1,025,683	+		PfGW456L13_915	0.45	-0.8
1,025,683	+		PfGW456L13_915	0.45	-0.4
1,025,684	-		PfGW456L13_915	0.45	-1.2
1,025,684	-		PfGW456L13_915	0.45	-0.5
1,025,684	-		PfGW456L13_915	0.45	+1.0
1,025,728	+		PfGW456L13_915	0.48	-0.5
1,025,728	+		PfGW456L13_915	0.48	-2.2
1,025,729	-		PfGW456L13_915	0.48	-0.4
1,025,729	-		PfGW456L13_915	0.48	+4.5
1,025,729	-		PfGW456L13_915	0.48	+0.3
1,025,731	+		PfGW456L13_915	0.48	-0.1
1,025,731	+		PfGW456L13_915	0.48	-0.5
1,025,731	+		PfGW456L13_915	0.48	-0.7
1,025,731	+		PfGW456L13_915	0.48	+0.1
1,025,732	-		PfGW456L13_915	0.48	-0.9
1,025,732	-		PfGW456L13_915	0.48	-1.7
1,025,732	-		PfGW456L13_915	0.48	-0.9
1,025,752	+		PfGW456L13_915	0.50	+0.4
1,025,752	+		PfGW456L13_915	0.50	-0.5
1,025,752	+		PfGW456L13_915	0.50	+1.0
1,025,753	-		PfGW456L13_915	0.50	+1.0
1,025,753	-		PfGW456L13_915	0.50	+1.0
1,025,753	-		PfGW456L13_915	0.50	+0.3
1,025,753	-		PfGW456L13_915	0.50	+0.2
1,025,753	-		PfGW456L13_915	0.50	-0.8
1,025,753	-		PfGW456L13_915	0.50	+1.5
1,025,753	-		PfGW456L13_915	0.50	-3.2
1,025,755	+		PfGW456L13_915	0.50	+0.8
1,025,755	+		PfGW456L13_915	0.50	+0.2
1,025,755	+		PfGW456L13_915	0.50	-0.4
1,025,755	+		PfGW456L13_915	0.50	-0.3
1,025,755	+		PfGW456L13_915	0.50	+0.3
1,025,755	+		PfGW456L13_915	0.50	-0.3
1,025,755	+		PfGW456L13_915	0.50	-0.8
1,025,755	+		PfGW456L13_915	0.50	-1.2
1,025,756	-		PfGW456L13_915	0.50	-1.1
1,025,756	-		PfGW456L13_915	0.50	+0.8
1,025,756	-		PfGW456L13_915	0.50	+0.6
1,025,756	-		PfGW456L13_915	0.50	-0.8
1,025,756	-		PfGW456L13_915	0.50	-2.0
1,025,756	-		PfGW456L13_915	0.50	-1.5
1,025,756	-		PfGW456L13_915	0.50	+0.7
1,025,756	-		PfGW456L13_915	0.50	+0.3
1,025,823	+		PfGW456L13_915	0.55	-0.5
1,025,823	+		PfGW456L13_915	0.55	+0.2
1,025,823	+		PfGW456L13_915	0.55	+0.6
1,025,824	-		PfGW456L13_915	0.55	-0.1
1,025,824	-		PfGW456L13_915	0.55	-1.3
1,025,830	+		PfGW456L13_915	0.56	+0.8
1,025,886	+		PfGW456L13_915	0.60	-1.1
1,025,886	+		PfGW456L13_915	0.60	-0.6
1,025,886	+		PfGW456L13_915	0.60	+0.2
1,025,887	-		PfGW456L13_915	0.60	-0.0
1,025,887	-		PfGW456L13_915	0.60	+0.7
1,025,887	-		PfGW456L13_915	0.60	-0.0
1,025,887	-		PfGW456L13_915	0.60	-2.2
1,025,950	+		PfGW456L13_915	0.65	-0.5
1,025,950	+		PfGW456L13_915	0.65	-1.6
1,025,951	-		PfGW456L13_915	0.65	-0.4
1,025,951	-		PfGW456L13_915	0.65	+0.2
1,025,951	-		PfGW456L13_915	0.65	+0.7
1,026,082	+		PfGW456L13_915	0.75	-2.5
1,026,082	+		PfGW456L13_915	0.75	+2.3
1,026,083	-		PfGW456L13_915	0.75	+0.3
1,026,083	-		PfGW456L13_915	0.75	+0.5
1,026,148	+		PfGW456L13_915	0.80	-0.5
1,026,149	-		PfGW456L13_915	0.80	-0.8
1,026,154	+		PfGW456L13_915	0.80	-0.2
1,026,154	+		PfGW456L13_915	0.80	+0.7
1,026,154	+		PfGW456L13_915	0.80	-0.1
1,026,154	+		PfGW456L13_915	0.80	+0.4
1,026,155	-		PfGW456L13_915	0.80	-1.8
1,026,155	-		PfGW456L13_915	0.80	-0.1
1,026,155	-		PfGW456L13_915	0.80	-0.6
1,026,155	-		PfGW456L13_915	0.80	-1.4
1,026,229	-		PfGW456L13_915	0.86	+0.6
1,026,229	-		PfGW456L13_915	0.86	-0.2
1,026,283	+		PfGW456L13_915	0.90	+1.2
1,026,341	-				-0.8
1,026,341	-				+0.3
1,026,400	+				+0.7
1,026,400	+				-0.4
1,026,400	+				-1.8
1,026,400	+				+0.7
1,026,400	+				-1.1
1,026,400	+				+0.6
1,026,400	+				-1.7
1,026,400	+				+0.5
1,026,400	+				-1.5
1,026,400	+				-0.3
1,026,401	-				-0.6
1,026,401	-				+0.7
1,026,401	-				-0.1
1,026,401	-				-0.4
1,026,401	-				+0.6
1,026,401	-				-0.1
1,026,401	-				-0.4
1,026,401	-				-0.7
1,026,401	-				-0.6
1,026,401	-				-0.5
1,026,406	+				+1.1
1,026,406	+				+0.0
1,026,406	+				-1.4
1,026,406	+				-0.2
1,026,406	+				-1.8
1,026,406	+				+0.8
1,026,406	+				+0.3
1,026,406	+				-1.8
1,026,406	+				-0.2
1,026,406	+				+1.0
1,026,407	-				-1.4
1,026,407	-				+0.1
1,026,407	-				-2.3
1,026,407	-				-0.3
1,026,407	-				-0.6
1,026,407	-				-0.4
1,026,407	-				-1.4
1,026,407	-				+1.3
1,026,407	-				-0.3
1,026,418	+				+0.0
1,026,419	-				+0.5
1,026,431	-				-0.5
1,026,537	+				+1.3
1,026,537	+				-0.3
1,026,599	+				+0.2
1,026,599	+				+1.3
1,026,599	+				+2.1
1,026,599	+				+0.4
1,026,599	+				+2.0
1,026,599	+				+1.0
1,026,600	-				+0.3
1,026,600	-				-2.2
1,026,600	-				+0.4
1,026,600	-				+0.4
1,026,600	-				-1.0
1,026,600	-				-0.6
1,026,600	-				+1.5
1,026,714	+				-0.4
1,026,714	+				+0.4
1,026,714	+				+0.4
1,026,714	+				+1.1
1,026,715	-				+0.9
1,026,715	-				-1.0
1,026,715	-				+1.1
1,026,715	-				-0.6
1,026,715	-				+0.5
1,026,715	-				+0.3
1,026,742	+				+0.1
1,026,762	+				+0.7
1,026,762	+				+0.5
1,026,763	-				+1.2
1,026,813	-				-0.2
1,026,813	-				+1.2
1,026,813	-				+0.3
1,026,813	-				-1.7
1,026,905	-				+0.0
1,026,905	-				-1.1
1,026,905	-				-1.2
1,026,937	+				-1.0
1,026,944	+				-0.3
1,026,944	+				-0.4
1,026,944	+				+0.0
1,026,944	+				+0.7
1,026,944	+				-0.7
1,026,944	+				-2.2
1,026,945	-				+0.3
1,027,031	+		PfGW456L13_916	0.15	+0.2
1,027,032	-		PfGW456L13_916	0.15	+0.5
1,027,131	-		PfGW456L13_916	0.22	-0.2
1,027,131	-		PfGW456L13_916	0.22	+1.6
1,027,381	+		PfGW456L13_916	0.41	+1.1
1,027,381	+		PfGW456L13_916	0.41	+0.6