Experiment: L-Valine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_794 and PfGW456L13_795 are separated by 24 nucleotides PfGW456L13_795 and PfGW456L13_796 are separated by 101 nucleotides PfGW456L13_796 and PfGW456L13_797 are separated by 5 nucleotides
PfGW456L13_794 - Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2), at 894,959 to 896,356
_794
PfGW456L13_795 - hypothetical protein, at 896,381 to 896,500
_795
PfGW456L13_796 - Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23), at 896,602 to 897,057
_796
PfGW456L13_797 - Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5), at 897,063 to 898,271
_797
Position (kb) 896
897
898 Strain fitness (log2 ratio) -2
-1
0
1 at 895.875 kb on + strand, within PfGW456L13_794 at 896.010 kb on + strand, within PfGW456L13_794 at 896.010 kb on + strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.011 kb on - strand, within PfGW456L13_794 at 896.063 kb on + strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.076 kb on + strand, within PfGW456L13_794 at 896.076 kb on + strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.079 kb on + strand, within PfGW456L13_794 at 896.079 kb on + strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.431 kb on + strand, within PfGW456L13_795 at 896.432 kb on - strand, within PfGW456L13_795 at 896.527 kb on + strand at 896.527 kb on + strand at 896.527 kb on + strand at 896.528 kb on - strand at 897.065 kb on - strand at 897.065 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (C) remove 895,875 + PfGW456L13_794 0.66 +0.9 896,010 + PfGW456L13_794 0.75 +1.3 896,010 + PfGW456L13_794 0.75 +1.0 896,011 - PfGW456L13_794 0.75 +1.3 896,011 - PfGW456L13_794 0.75 +0.9 896,011 - PfGW456L13_794 0.75 -1.0 896,011 - PfGW456L13_794 0.75 +0.8 896,063 + PfGW456L13_794 0.79 +0.2 896,064 - PfGW456L13_794 0.79 -0.5 896,064 - PfGW456L13_794 0.79 +0.6 896,064 - PfGW456L13_794 0.79 -1.5 896,076 + PfGW456L13_794 0.80 +0.6 896,076 + PfGW456L13_794 0.80 +0.8 896,077 - PfGW456L13_794 0.80 -0.0 896,077 - PfGW456L13_794 0.80 +1.1 896,077 - PfGW456L13_794 0.80 +0.3 896,077 - PfGW456L13_794 0.80 +0.2 896,077 - PfGW456L13_794 0.80 -0.4 896,079 + PfGW456L13_794 0.80 -2.0 896,079 + PfGW456L13_794 0.80 +1.0 896,080 - PfGW456L13_794 0.80 +0.3 896,080 - PfGW456L13_794 0.80 -0.8 896,080 - PfGW456L13_794 0.80 +0.1 896,080 - PfGW456L13_794 0.80 -0.7 896,431 + PfGW456L13_795 0.42 +0.8 896,432 - PfGW456L13_795 0.42 +1.3 896,527 + +0.0 896,527 + +0.8 896,527 + +0.4 896,528 - +0.5 897,065 - +1.3 897,065 - +0.4
Or see this region's nucleotide sequence