Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3031

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
3,368,524	+		PfGW456L13_3029	0.79	-1.9
3,368,540	+		PfGW456L13_3029	0.80	-0.6
3,368,540	+		PfGW456L13_3029	0.80	-0.3
3,368,540	+		PfGW456L13_3029	0.80	-0.1
3,368,540	+		PfGW456L13_3029	0.80	+1.0
3,368,541	-		PfGW456L13_3029	0.80	+1.0
3,368,541	-		PfGW456L13_3029	0.80	+1.1
3,368,689	-				+0.9
3,368,708	+				-2.3
3,368,708	+				-0.1
3,368,709	-				+1.1
3,368,709	-				+1.0
3,368,714	+				+0.8
3,368,714	+				-0.5
3,368,714	+				-1.0
3,368,714	+				+0.2
3,368,714	+				-0.4
3,368,714	+				-1.2
3,368,715	-				+0.7
3,368,715	-				-0.4
3,368,715	-				+0.4
3,368,715	-				-2.5
3,368,715	-				-0.2
3,368,715	-				-0.6
3,368,715	-				-0.8
3,368,715	-				+0.4
3,368,715	-				-0.3
3,368,715	-				+1.1
3,368,747	+				-0.6
3,368,747	+				-0.2
3,368,748	-				-2.6
3,368,748	-				-0.3
3,368,748	-				+1.1
3,368,765	+				-2.2
3,368,766	-				+1.1
3,368,797	+				+0.9
3,368,798	-				+0.4
3,368,857	-				-1.0
3,368,885	+				+0.2
3,368,959	+		PfGW456L13_3030	0.15	-2.7
3,368,959	+		PfGW456L13_3030	0.15	+0.0
3,368,959	+		PfGW456L13_3030	0.15	+0.1
3,368,959	+		PfGW456L13_3030	0.15	-1.3
3,368,960	-		PfGW456L13_3030	0.15	+0.6
3,368,969	+		PfGW456L13_3030	0.18	-1.6
3,368,970	-		PfGW456L13_3030	0.18	+1.2
3,368,970	-		PfGW456L13_3030	0.18	-1.4
3,368,970	-		PfGW456L13_3030	0.18	-0.7
3,368,970	-		PfGW456L13_3030	0.18	+0.6
3,369,010	+		PfGW456L13_3030	0.30	-1.8
3,369,011	-		PfGW456L13_3030	0.31	+0.1
3,369,011	-		PfGW456L13_3030	0.31	+0.2
3,369,011	-		PfGW456L13_3030	0.31	-2.5
3,369,011	-		PfGW456L13_3030	0.31	-2.9
3,369,011	-		PfGW456L13_3030	0.31	-0.7
3,369,011	-		PfGW456L13_3030	0.31	-0.8
3,369,014	+		PfGW456L13_3030	0.32	-0.9
3,369,014	+		PfGW456L13_3030	0.32	+0.1
3,369,014	+		PfGW456L13_3030	0.32	-0.7
3,369,014	+		PfGW456L13_3030	0.32	+0.1
3,369,014	+		PfGW456L13_3030	0.32	-1.6
3,369,015	-		PfGW456L13_3030	0.32	-0.1
3,369,015	-		PfGW456L13_3030	0.32	-0.8
3,369,062	+		PfGW456L13_3030	0.46	-0.5
3,369,062	+		PfGW456L13_3030	0.46	+0.1
3,369,063	-		PfGW456L13_3030	0.46	+0.4
3,369,063	-		PfGW456L13_3030	0.46	+0.8
3,369,095	+		PfGW456L13_3030	0.56	+0.4
3,369,096	-		PfGW456L13_3030	0.56	-0.7
3,369,120	+		PfGW456L13_3030	0.63	-0.7
3,369,192	+		PfGW456L13_3030	0.85	-2.1
3,369,192	+		PfGW456L13_3030	0.85	+1.8
3,369,192	+		PfGW456L13_3030	0.85	+0.3
3,369,193	-		PfGW456L13_3030	0.85	-0.7
3,369,194	+		PfGW456L13_3030	0.85	+0.6
3,369,195	-		PfGW456L13_3030	0.85	-0.3
3,369,267	+				-0.5
3,369,267	+				+1.4
3,369,267	+				+0.6
3,369,268	-				-2.8
3,369,268	-				+0.9
3,369,268	-				-2.0
3,369,268	-				-0.4
3,369,281	+				+1.1
3,369,281	+				-0.1
3,369,281	+				+1.7
3,369,282	-				-0.8
3,369,282	-				-0.5
3,369,282	-				-0.5
3,369,282	-				+2.3
3,369,282	-				+0.3
3,369,282	-				-1.3
3,369,282	-				-2.3
3,369,284	-				+0.1
3,369,330	-				-2.9
3,369,355	-				-3.5
3,369,376	+				-0.9
3,369,376	+				-1.9
3,369,376	+				-1.5
3,369,376	+				-1.7
3,369,377	-				-1.5
3,369,377	-				-2.7
3,369,377	-				-1.8
3,369,377	-				-0.8
3,369,379	+				-2.5
3,369,405	-				-0.4
3,369,448	+				+2.1
3,369,530	+				-1.9
3,369,531	-				-2.3
3,369,531	-				-1.2
3,369,531	-				-1.3
3,369,531	-				-0.5
3,369,560	+				-2.1
3,369,561	-				-2.1
3,369,561	-				-1.7
3,369,683	+		PfGW456L13_3031	0.19	+1.3
3,369,683	+		PfGW456L13_3031	0.19	-0.1
3,369,683	+		PfGW456L13_3031	0.19	-4.6
3,369,684	-		PfGW456L13_3031	0.19	-2.5
3,369,684	-		PfGW456L13_3031	0.19	+0.4
3,369,684	-		PfGW456L13_3031	0.19	-2.7
3,369,684	-		PfGW456L13_3031	0.19	-1.2
3,369,684	-		PfGW456L13_3031	0.19	-3.7
3,369,684	-		PfGW456L13_3031	0.19	-1.0
3,370,082	+		PfGW456L13_3031	0.58	-2.2
3,370,082	+		PfGW456L13_3031	0.58	-0.2
3,370,083	-		PfGW456L13_3031	0.58	-2.3
3,370,083	-		PfGW456L13_3031	0.58	-3.4
3,370,091	+		PfGW456L13_3031	0.59	-3.2
3,370,091	+		PfGW456L13_3031	0.59	-1.9
3,370,091	+		PfGW456L13_3031	0.59	-3.1
3,370,091	+		PfGW456L13_3031	0.59	-3.2
3,370,092	-		PfGW456L13_3031	0.59	-3.3
3,370,236	-		PfGW456L13_3031	0.73	-0.5
3,370,236	-		PfGW456L13_3031	0.73	-1.9
3,370,236	-		PfGW456L13_3031	0.73	-1.8
3,370,316	-		PfGW456L13_3031	0.81	-1.2
3,370,316	-		PfGW456L13_3031	0.81	-3.0
3,370,328	-		PfGW456L13_3031	0.83	-0.7
3,370,382	+		PfGW456L13_3031	0.88	-0.6
3,370,383	-		PfGW456L13_3031	0.88	-2.2
3,370,383	-		PfGW456L13_3031	0.88	-1.9
3,370,383	-		PfGW456L13_3031	0.88	-2.2
3,370,642	-		PfGW456L13_3032	0.15	+0.1
3,370,642	-		PfGW456L13_3032	0.15	-0.3
3,370,645	+		PfGW456L13_3032	0.16	-0.4
3,370,645	+		PfGW456L13_3032	0.16	+1.2
3,370,645	+		PfGW456L13_3032	0.16	-0.3
3,370,645	+		PfGW456L13_3032	0.16	+0.9
3,370,645	+		PfGW456L13_3032	0.16	+0.5
3,370,646	-		PfGW456L13_3032	0.16	+0.2
3,370,646	-		PfGW456L13_3032	0.16	-0.7
3,370,646	-		PfGW456L13_3032	0.16	-1.9
3,370,646	-		PfGW456L13_3032	0.16	-0.1
3,370,646	-		PfGW456L13_3032	0.16	-0.2
3,370,646	-		PfGW456L13_3032	0.16	-0.7
3,370,646	-		PfGW456L13_3032	0.16	-1.8
3,370,672	+		PfGW456L13_3032	0.21	-1.0
3,370,672	+		PfGW456L13_3032	0.21	-0.5
3,370,672	+		PfGW456L13_3032	0.21	+0.1
3,370,781	-		PfGW456L13_3032	0.44	-0.4
3,371,170	-				+0.9
3,371,180	+				-0.6
3,371,180	+				-0.5
3,371,180	+				-1.1
3,371,181	-				-1.9
3,371,195	+				-1.1
3,371,195	+				+1.3
3,371,195	+				-0.2
3,371,195	+				-0.6
3,371,196	-				-0.3
3,371,196	-				+2.3
3,371,196	-				-2.6
3,371,197	+				-0.7
3,371,198	-				-1.9
3,371,238	+				-0.6
3,371,239	-				+0.3
3,371,239	-				+0.7
3,371,239	-				-1.3
3,371,239	-				+0.4
3,371,239	-				-1.3
3,371,245	+				+0.2
3,371,245	+				+0.2
3,371,245	+				-0.5
3,371,245	+				-1.4
3,371,245	+				-0.6
3,371,245	+				+0.7
3,371,245	+				+0.6
3,371,246	-				-0.2
3,371,246	-				+1.5
3,371,246	-				+0.2
3,371,252	+				-0.3
3,371,252	+				+0.0
3,371,252	+				+0.2
3,371,252	+				+2.1
3,371,252	+				+1.4
3,371,252	+				+0.0
3,371,252	+				-0.9
3,371,252	+				+0.9
3,371,253	-				-0.5
3,371,360	+		PfGW456L13_3033	0.11	+0.1
3,371,436	+		PfGW456L13_3033	0.39	+0.9
3,371,436	+		PfGW456L13_3033	0.39	+0.5
3,371,436	+		PfGW456L13_3033	0.39	+1.1
3,371,436	+		PfGW456L13_3033	0.39	-0.5
3,371,437	-		PfGW456L13_3033	0.40	+0.3
3,371,437	-		PfGW456L13_3033	0.40	-0.2
3,371,467	+		PfGW456L13_3033	0.51	+1.6
3,371,467	+		PfGW456L13_3033	0.51	+0.4
3,371,468	-		PfGW456L13_3033	0.51	-0.7