Strain Fitness in Escherichia coli BW25113 around b3812

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
3,994,210	-	yigA	b3810	0.85	+0.4
3,994,279	-				+0.1
3,994,300	-				+0.3
3,994,300	-				+1.3
3,994,314	-				+0.2
3,994,318	+				+0.4
3,994,399	+				-0.4
3,994,765	+	xerC	b3811	0.51	-2.6
3,994,776	+	xerC	b3811	0.52	+0.3
3,994,932	+	xerC	b3811	0.69	+0.3
3,995,087	+	xerC	b3811	0.87	-1.7
3,995,093	-	xerC	b3811	0.87	-0.3
3,995,093	-	xerC	b3811	0.87	-1.6
3,995,095	-	xerC	b3811	0.88	+0.3
3,995,113	+	xerC	b3811	0.90	-0.1
3,995,165	+				-2.1
3,995,165	+				-1.3
3,995,246	+				-1.6
3,995,246	+				-0.1
3,995,251	+				-0.3
3,995,308	+	yigB	b3812	0.14	-1.4
3,995,308	+	yigB	b3812	0.14	-0.3
3,995,316	-	yigB	b3812	0.15	-0.7
3,995,338	+	yigB	b3812	0.18	-1.1
3,995,341	+	yigB	b3812	0.19	-1.7
3,995,351	-	yigB	b3812	0.20	+0.3
3,995,379	-	yigB	b3812	0.24	-0.9
3,995,391	-	yigB	b3812	0.26	-0.7
3,995,400	+	yigB	b3812	0.27	-1.7
3,995,567	+	yigB	b3812	0.50	-0.2
3,995,615	+	yigB	b3812	0.57	-0.7
3,995,615	+	yigB	b3812	0.57	+1.7
3,995,782	+	yigB	b3812	0.80	-0.9
3,995,826	-	yigB	b3812	0.86	+1.4
3,995,864	+				+1.1
3,995,875	-				+2.0
3,995,875	-				-1.4
3,995,950	-				-0.3
3,995,962	+				-1.9
3,996,013	+				+0.3
3,996,013	+				-2.6
3,996,013	+				-2.2
3,996,013	+				-1.3
3,996,013	+				-0.7
3,996,021	-				-2.2
3,996,037	+				-1.4
3,996,069	+				-2.6
3,996,095	+				-3.7
3,996,103	+				-1.7
3,996,111	-				-2.3
3,996,148	+				-2.9
3,996,150	+				-2.6
3,996,180	-				-1.4
3,996,246	+	uvrD	b3813	0.11	-3.0
3,996,246	+	uvrD	b3813	0.11	-1.9
3,996,253	+	uvrD	b3813	0.11	-3.4
3,996,256	+	uvrD	b3813	0.12	-2.3
3,996,256	+	uvrD	b3813	0.12	-1.7
3,996,280	+	uvrD	b3813	0.13	-3.2
3,996,299	+	uvrD	b3813	0.14	-2.3
3,996,316	-	uvrD	b3813	0.14	-1.2
3,996,316	-	uvrD	b3813	0.14	-3.4
3,996,342	-	uvrD	b3813	0.16	-3.9
3,996,342	-	uvrD	b3813	0.16	-3.2
3,996,398	-	uvrD	b3813	0.18	-2.6
3,996,434	+	uvrD	b3813	0.20	-2.6
3,996,462	+	uvrD	b3813	0.21	-3.6
3,996,464	-	uvrD	b3813	0.21	-2.2
3,996,464	-	uvrD	b3813	0.21	-3.0
3,996,465	-	uvrD	b3813	0.21	-0.3
3,996,488	-	uvrD	b3813	0.22	-1.4
3,996,491	+	uvrD	b3813	0.22	-0.9
3,996,504	+	uvrD	b3813	0.23	-2.4
3,996,504	+	uvrD	b3813	0.23	-2.3
3,996,517	-	uvrD	b3813	0.24	-2.2
3,996,517	-	uvrD	b3813	0.24	-2.1
3,996,522	-	uvrD	b3813	0.24	-1.9
3,996,522	-	uvrD	b3813	0.24	-0.1
3,996,606	-	uvrD	b3813	0.28	-2.1
3,996,629	+	uvrD	b3813	0.29	-1.3
3,996,632	-	uvrD	b3813	0.29	+1.3
3,996,632	-	uvrD	b3813	0.29	-1.6
3,996,654	+	uvrD	b3813	0.30	-2.4
3,996,747	+	uvrD	b3813	0.34	-2.6
3,996,762	+	uvrD	b3813	0.35	-1.2
3,996,790	+	uvrD	b3813	0.36	-2.2
3,996,790	+	uvrD	b3813	0.36	-3.0
3,996,805	+	uvrD	b3813	0.37	-2.0
3,996,859	+	uvrD	b3813	0.39	-2.3
3,996,865	+	uvrD	b3813	0.40	-3.1
3,996,865	+	uvrD	b3813	0.40	-1.1