Strain Fitness in Escherichia coli BW25113 around b2582
Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.008 vol% |
---|---|---|---|---|---|
remove | |||||
2,715,854 | + | yfiF | b2581 | 0.33 | +0.9 |
2,715,879 | - | yfiF | b2581 | 0.35 | -1.0 |
2,715,997 | + | yfiF | b2581 | 0.47 | -0.2 |
2,715,997 | + | yfiF | b2581 | 0.47 | -1.1 |
2,715,997 | + | yfiF | b2581 | 0.47 | +0.9 |
2,715,997 | + | yfiF | b2581 | 0.47 | +0.9 |
2,716,005 | - | yfiF | b2581 | 0.47 | +0.1 |
2,716,005 | - | yfiF | b2581 | 0.47 | +0.1 |
2,716,005 | - | yfiF | b2581 | 0.47 | +0.4 |
2,716,005 | - | yfiF | b2581 | 0.47 | -0.9 |
2,716,141 | + | yfiF | b2581 | 0.61 | +0.9 |
2,716,141 | + | +1.9 | |||
2,716,183 | - | yfiF | b2581 | 0.65 | +0.7 |
2,716,183 | - | yfiF | b2581 | 0.65 | +0.0 |
2,716,229 | + | yfiF | b2581 | 0.69 | -0.9 |
2,716,265 | - | yfiF | b2581 | 0.72 | +0.3 |
2,716,265 | - | yfiF | b2581 | 0.72 | -0.5 |
2,716,313 | + | yfiF | b2581 | 0.77 | -0.6 |
2,716,313 | + | yfiF | b2581 | 0.77 | -1.5 |
2,716,387 | - | yfiF | b2581 | 0.84 | +1.5 |
2,716,387 | - | yfiF | b2581 | 0.84 | -0.8 |
2,716,440 | + | yfiF | b2581 | 0.89 | +0.0 |
2,716,446 | + | yfiF | b2581 | 0.90 | +0.1 |
2,716,485 | + | +1.4 | |||
2,716,742 | + | -0.0 | |||
2,716,762 | - | +0.4 | |||
2,716,832 | + | trxC | b2582 | 0.18 | +1.9 |
2,717,016 | - | trxC | b2582 | 0.62 | +1.8 |
2,717,103 | + | trxC | b2582 | 0.82 | +0.7 |
2,717,387 | - | yfiP | b2583 | 0.20 | +1.2 |
2,717,387 | - | yfiP | b2583 | 0.20 | +0.9 |
2,717,445 | + | yfiP | b2583 | 0.29 | +1.5 |
2,717,445 | + | yfiP | b2583 | 0.29 | -0.4 |
2,717,458 | - | yfiP | b2583 | 0.30 | +0.5 |
2,717,591 | - | yfiP | b2583 | 0.49 | +1.2 |
2,717,591 | - | yfiP | b2583 | 0.49 | -2.4 |
2,717,605 | + | yfiP | b2583 | 0.52 | -0.7 |
2,717,612 | + | yfiP | b2583 | 0.53 | -1.7 |
2,717,612 | + | yfiP | b2583 | 0.53 | +0.3 |
2,717,767 | - | yfiP | b2583 | 0.75 | -0.7 |
2,717,817 | - | yfiP | b2583 | 0.82 | +0.3 |
2,717,846 | + | yfiP | b2583 | 0.86 | +0.5 |
2,717,846 | + | yfiP | b2583 | 0.86 | +0.0 |
2,717,854 | - | yfiP | b2583 | 0.87 | +0.9 |
2,717,902 | + | -0.3 | |||
2,717,902 | + | +0.2 | |||
2,717,979 | - | +0.3 | |||
2,718,064 | - | +0.4 | |||
2,718,151 | - | +0.3 | |||
2,718,151 | - | -1.9 |
Or see this region's nucleotide sequence