Strain Fitness in Escherichia coli BW25113 around b1729
Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.008 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 1,808,090 | + | +0.6 | |||
| 1,808,185 | - | -0.4 | |||
| 1,808,203 | - | +0.4 | |||
| 1,808,359 | + | ydjM | b1728 | 0.21 | +0.4 |
| 1,808,524 | - | ydjM | b1728 | 0.49 | -0.5 |
| 1,808,524 | - | ydjM | b1728 | 0.49 | -0.8 |
| 1,808,679 | + | ydjM | b1728 | 0.75 | -1.7 |
| 1,808,870 | + | -2.6 | |||
| 1,808,924 | - | -2.3 | |||
| 1,809,193 | + | ydjN | b1729 | 0.17 | -3.0 |
| 1,809,214 | + | ydjN | b1729 | 0.18 | -1.7 |
| 1,809,242 | + | ydjN | b1729 | 0.20 | +0.8 |
| 1,809,242 | + | ydjN | b1729 | 0.20 | +0.4 |
| 1,809,720 | + | ydjN | b1729 | 0.55 | -1.6 |
| 1,809,720 | + | ydjN | b1729 | 0.55 | -0.8 |
| 1,810,253 | + | -2.0 | |||
| 1,810,253 | + | -2.4 | |||
| 1,810,284 | + | -0.5 | |||
| 1,810,284 | + | -0.2 | |||
| 1,810,343 | + | -0.3 | |||
| 1,810,445 | - | ydjO | b1730 | 0.11 | -1.2 |
| 1,810,493 | + | ydjO | b1730 | 0.17 | -0.5 |
| 1,810,515 | + | ydjO | b1730 | 0.20 | -0.6 |
| 1,811,304 | - | -1.8 |
Or see this region's nucleotide sequence