Strain Fitness in Escherichia coli BW25113 around b1726
Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.008 vol% |
---|---|---|---|---|---|
remove | |||||
1,805,853 | + | +0.8 | |||
1,805,863 | - | +1.4 | |||
1,805,863 | - | -0.5 | |||
1,805,980 | - | yniA | b1725 | 0.19 | -1.1 |
1,806,165 | - | yniA | b1725 | 0.40 | -0.6 |
1,806,217 | - | yniA | b1725 | 0.46 | +0.1 |
1,806,333 | + | yniA | b1725 | 0.60 | -0.2 |
1,806,412 | + | yniA | b1725 | 0.69 | -0.8 |
1,806,412 | + | yniA | b1725 | 0.69 | +1.8 |
1,806,430 | - | yniA | b1725 | 0.71 | -0.2 |
1,806,458 | + | yniA | b1725 | 0.74 | -0.2 |
1,806,458 | + | yniA | b1725 | 0.74 | +0.2 |
1,806,464 | + | yniA | b1725 | 0.75 | -0.2 |
1,806,563 | + | yniA | b1725 | 0.86 | +0.4 |
1,806,563 | + | yniA | b1725 | 0.86 | -2.6 |
1,806,573 | + | yniA | b1725 | 0.87 | -0.1 |
1,806,593 | - | yniA | b1725 | 0.90 | +0.2 |
1,806,593 | - | yniA | b1725 | 0.90 | +0.8 |
1,806,598 | - | -0.2 | |||
1,806,599 | - | -0.2 | |||
1,806,599 | - | +1.9 | |||
1,806,665 | + | +0.6 | |||
1,806,684 | + | -1.2 | |||
1,806,684 | + | -0.2 | |||
1,806,686 | - | -1.2 | |||
1,806,686 | - | -0.2 | |||
1,806,687 | - | +0.1 | |||
1,806,697 | + | +0.3 | |||
1,806,772 | - | -0.6 | |||
1,806,781 | + | yniB | b1726 | 0.11 | -1.2 |
1,807,061 | + | yniB | b1726 | 0.63 | +0.0 |
1,807,103 | - | yniB | b1726 | 0.71 | -1.6 |
1,807,241 | + | +0.1 | |||
1,807,253 | + | -0.3 | |||
1,807,288 | + | -0.1 | |||
1,807,353 | + | -0.7 | |||
1,807,363 | + | +0.6 | |||
1,807,387 | - | +0.8 | |||
1,807,387 | - | +0.8 | |||
1,807,470 | + | -0.6 | |||
1,807,489 | + | yniC | b1727 | 0.13 | -0.7 |
1,807,867 | - | yniC | b1727 | 0.69 | +0.8 |
1,807,904 | - | yniC | b1727 | 0.75 | -0.2 |
1,808,090 | + | +0.6 | |||
1,808,185 | - | -0.4 | |||
1,808,203 | - | +0.4 |
Or see this region's nucleotide sequence