Strain Fitness in Escherichia coli BW25113 around b1226
Experiment: methylglyoxal 0.008 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | methylglyoxal 0.008 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 1,283,638 | + | narH | b1225 | 0.53 | +0.8 |
| 1,283,650 | - | narH | b1225 | 0.53 | -1.2 |
| 1,283,650 | - | narH | b1225 | 0.53 | +0.5 |
| 1,283,882 | + | narH | b1225 | 0.69 | -0.8 |
| 1,283,882 | + | narH | b1225 | 0.69 | +0.0 |
| 1,283,939 | + | narH | b1225 | 0.72 | +0.2 |
| 1,283,947 | - | narH | b1225 | 0.73 | +0.8 |
| 1,283,947 | - | narH | b1225 | 0.73 | -0.0 |
| 1,284,099 | + | narH | b1225 | 0.83 | -0.2 |
| 1,284,152 | + | narH | b1225 | 0.86 | +0.2 |
| 1,284,436 | + | narJ | b1226 | 0.10 | -1.0 |
| 1,284,436 | + | narJ | b1226 | 0.10 | -0.3 |
| 1,284,480 | + | narJ | b1226 | 0.17 | -1.2 |
| 1,284,554 | - | narJ | b1226 | 0.27 | -1.2 |
| 1,284,634 | + | narJ | b1226 | 0.38 | -1.0 |
| 1,284,728 | - | narJ | b1226 | 0.51 | +0.8 |
| 1,284,809 | + | narJ | b1226 | 0.63 | -0.8 |
| 1,284,809 | + | narJ | b1226 | 0.63 | -0.8 |
| 1,285,100 | + | +0.3 | |||
| 1,285,167 | + | narI | b1227 | 0.14 | -1.0 |
| 1,285,352 | - | narI | b1227 | 0.41 | +1.2 |
| 1,285,352 | - | narI | b1227 | 0.41 | -1.6 |
| 1,285,476 | + | narI | b1227 | 0.60 | +0.1 |
| 1,285,509 | - | narI | b1227 | 0.64 | +0.7 |
| 1,285,518 | + | narI | b1227 | 0.66 | -0.8 |
| 1,285,518 | + | narI | b1227 | 0.66 | -0.4 |
| 1,285,526 | - | narI | b1227 | 0.67 | +0.5 |
| 1,285,605 | - | narI | b1227 | 0.79 | -1.1 |
| 1,285,670 | - | narI | b1227 | 0.88 | +0.4 |
| 1,285,686 | + | -0.6 | |||
| 1,285,694 | - | +2.4 | |||
| 1,285,707 | + | -0.8 |
Or see this region's nucleotide sequence