Strain Fitness in Escherichia coli BW25113 around b0045

Experiment: methylglyoxal 0.008 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.008 vol%
44,857	-	fixC	b0043	0.53	-0.3
44,862	-	fixC	b0043	0.53	+0.1
44,906	-	fixC	b0043	0.56	-1.5
45,034	+	fixC	b0043	0.66	-1.3
45,034	+	fixC	b0043	0.66	-1.8
45,044	+	fixC	b0043	0.67	-1.2
45,044	+	fixC	b0043	0.67	-0.2
45,232	+	fixC	b0043	0.82	+0.2
45,241	-	fixC	b0043	0.82	-0.3
45,323	-	fixC	b0043	0.89	-0.8
45,339	+				+1.3
45,339	+				-0.0
45,340	-				-1.3
45,426	+				+1.7
45,546	-	fixX	b0044	0.29	+0.3
45,610	+	fixX	b0044	0.51	+0.4
45,700	-	fixX	b0044	0.82	+0.6
45,704	+	fixX	b0044	0.84	+0.1
45,704	+	fixX	b0044	0.84	+1.3
45,844	+				+0.2
45,880	-				-1.6
45,924	+				+0.4
46,113	+	yaaU	b0045	0.23	+0.3
46,113	+	yaaU	b0045	0.23	-0.0
46,142	-	yaaU	b0045	0.25	-0.5
46,144	-	yaaU	b0045	0.25	+0.4
46,176	-	yaaU	b0045	0.28	+2.0
46,176	-	yaaU	b0045	0.28	-0.3
46,240	+	yaaU	b0045	0.33	-0.5
46,284	-	yaaU	b0045	0.36	+0.6
46,329	+	yaaU	b0045	0.39	-0.5
46,329	+	yaaU	b0045	0.39	-0.3
46,463	+	yaaU	b0045	0.49	-0.6
46,463	+	yaaU	b0045	0.49	+1.0
46,564	+	yaaU	b0045	0.57	-0.5
46,564	+	yaaU	b0045	0.57	-0.8
46,575	+	yaaU	b0045	0.58	-0.3
46,707	-	yaaU	b0045	0.68	-0.7
46,707	-	yaaU	b0045	0.68	-1.3
46,800	+	yaaU	b0045	0.75	+1.0
46,920	-	yaaU	b0045	0.84	-1.0
47,003	+	yaaU	b0045	0.90	+1.0
47,067	+				-0.7
47,097	-				-0.8
47,097	-				+0.2
47,113	-				+0.5
47,113	-				+1.6
47,202	-				+2.0
47,225	+				+0.2
47,225	+				-0.3
47,247	-				+0.1
47,269	+				-0.2
47,359	-	kefF	b0046	0.21	+0.5
47,364	-	kefF	b0046	0.22	+0.6
47,364	-	kefF	b0046	0.22	-0.3
47,364	-	kefF	b0046	0.22	+0.3
47,364	-	kefF	b0046	0.22	-0.5
47,402	-	kefF	b0046	0.29	+0.8
47,412	-	kefF	b0046	0.31	-0.9
47,446	+	kefF	b0046	0.38	+0.6
47,454	+	kefF	b0046	0.39	+0.6
47,503	+	kefF	b0046	0.48	+3.0
47,504	+	kefF	b0046	0.49	-1.2
47,504	+	kefF	b0046	0.49	+0.6
47,639	+	kefF	b0046	0.74	+0.1
47,651	+	kefF	b0046	0.76	+0.1
47,675	+	kefF	b0046	0.81	+0.7
47,681	+	kefF	b0046	0.82	+0.4
47,681	+	kefF	b0046	0.82	-0.8
47,730	+				+0.0
47,762	+				-0.8
47,774	-				-2.7
47,784	-				-1.0
47,823	+				-0.0
47,823	+				-2.3
47,832	+				+1.3
47,832	+				+1.0
47,836	+				+1.0
47,848	+				-0.5
47,859	+				+0.3
47,921	+				-0.6
47,948	+				+0.7
47,948	+				+0.6
47,958	+	kefC	b0047	0.10	+0.6
47,958	+	kefC	b0047	0.10	+1.4
47,977	-	kefC	b0047	0.11	+0.4
48,009	-	kefC	b0047	0.13	-1.0
48,009	-	kefC	b0047	0.13	-0.2
48,009	-	kefC	b0047	0.13	+2.3
48,031	+	kefC	b0047	0.14	-1.1