Experiment: L-Alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_604 and PfGW456L13_605 are separated by 174 nucleotides PfGW456L13_605 and PfGW456L13_606 overlap by 4 nucleotides PfGW456L13_606 and PfGW456L13_607 overlap by 13 nucleotides
PfGW456L13_604 - Methionine ABC transporter substrate-binding protein, at 697,388 to 698,158
_604
PfGW456L13_605 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 698,333 to 698,968
_605
PfGW456L13_606 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 698,965 to 699,864
_606
PfGW456L13_607 - Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA, at 699,852 to 700,922
_607
Position (kb) 698
699
700 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 698.021 kb on + strand, within PfGW456L13_604 at 698.022 kb on - strand, within PfGW456L13_604 at 698.022 kb on - strand, within PfGW456L13_604 at 698.022 kb on - strand, within PfGW456L13_604 at 698.022 kb on - strand, within PfGW456L13_604 at 698.129 kb on + strand at 698.129 kb on + strand at 698.129 kb on + strand at 698.129 kb on + strand at 698.129 kb on + strand at 698.129 kb on + strand at 698.130 kb on - strand at 698.218 kb on + strand at 698.219 kb on - strand at 698.219 kb on - strand at 698.219 kb on - strand at 698.219 kb on - strand at 698.219 kb on - strand at 698.219 kb on - strand at 698.258 kb on + strand at 698.258 kb on + strand at 698.285 kb on - strand at 698.285 kb on - strand at 698.460 kb on + strand, within PfGW456L13_605 at 698.461 kb on - strand, within PfGW456L13_605 at 698.580 kb on + strand, within PfGW456L13_605 at 698.581 kb on - strand, within PfGW456L13_605 at 698.939 kb on + strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.940 kb on - strand at 698.968 kb on + strand at 698.968 kb on + strand at 698.968 kb on + strand at 698.968 kb on + strand at 698.969 kb on - strand at 698.969 kb on - strand at 698.969 kb on - strand at 698.969 kb on - strand at 698.969 kb on - strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.980 kb on + strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.981 kb on - strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.984 kb on + strand at 698.985 kb on - strand at 698.985 kb on - strand at 698.985 kb on - strand at 698.985 kb on - strand at 698.985 kb on - strand at 698.985 kb on - strand at 698.985 kb on - strand at 698.992 kb on + strand at 698.992 kb on + strand at 699.023 kb on + strand at 699.023 kb on + strand at 699.023 kb on + strand at 699.024 kb on - strand at 699.024 kb on - strand at 699.024 kb on - strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.026 kb on + strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.027 kb on - strand at 699.030 kb on + strand at 699.030 kb on + strand at 699.030 kb on + strand at 699.030 kb on + strand at 699.030 kb on + strand at 699.030 kb on + strand at 699.030 kb on + strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.031 kb on - strand at 699.035 kb on + strand at 699.035 kb on + strand at 699.035 kb on + strand at 699.035 kb on + strand at 699.036 kb on - strand at 699.036 kb on - strand at 699.036 kb on - strand at 699.036 kb on - strand at 699.077 kb on + strand, within PfGW456L13_606 at 699.078 kb on - strand, within PfGW456L13_606 at 699.135 kb on - strand, within PfGW456L13_606 at 699.135 kb on - strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.161 kb on + strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.162 kb on - strand, within PfGW456L13_606 at 699.195 kb on + strand, within PfGW456L13_606 at 699.195 kb on + strand, within PfGW456L13_606 at 699.195 kb on + strand, within PfGW456L13_606 at 699.195 kb on + strand, within PfGW456L13_606 at 699.196 kb on - strand, within PfGW456L13_606 at 699.196 kb on - strand at 699.196 kb on - strand, within PfGW456L13_606 at 699.197 kb on + strand, within PfGW456L13_606 at 699.197 kb on + strand, within PfGW456L13_606 at 699.197 kb on + strand, within PfGW456L13_606 at 699.197 kb on + strand, within PfGW456L13_606 at 699.197 kb on + strand, within PfGW456L13_606 at 699.197 kb on + strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.198 kb on - strand, within PfGW456L13_606 at 699.221 kb on + strand, within PfGW456L13_606 at 699.222 kb on - strand, within PfGW456L13_606 at 699.222 kb on - strand, within PfGW456L13_606 at 699.222 kb on - strand, within PfGW456L13_606 at 699.222 kb on - strand, within PfGW456L13_606 at 699.222 kb on - strand, within PfGW456L13_606 at 699.222 kb on - strand, within PfGW456L13_606 at 699.269 kb on + strand, within PfGW456L13_606 at 699.269 kb on + strand, within PfGW456L13_606 at 699.270 kb on - strand, within PfGW456L13_606 at 699.270 kb on - strand, within PfGW456L13_606 at 699.270 kb on - strand, within PfGW456L13_606 at 699.270 kb on - strand, within PfGW456L13_606 at 699.461 kb on + strand, within PfGW456L13_606 at 699.461 kb on + strand, within PfGW456L13_606 at 699.462 kb on - strand, within PfGW456L13_606 at 699.462 kb on - strand, within PfGW456L13_606 at 699.462 kb on - strand, within PfGW456L13_606 at 699.462 kb on - strand, within PfGW456L13_606 at 699.462 kb on - strand, within PfGW456L13_606 at 699.462 kb on - strand, within PfGW456L13_606 at 699.816 kb on - strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.879 kb on + strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.880 kb on - strand at 699.905 kb on + strand at 699.905 kb on + strand at 699.905 kb on + strand at 699.906 kb on - strand at 699.906 kb on - strand at 699.964 kb on + strand, within PfGW456L13_607 at 699.965 kb on - strand, within PfGW456L13_607 at 700.153 kb on - strand, within PfGW456L13_607 at 700.168 kb on - strand, within PfGW456L13_607 at 700.234 kb on + strand, within PfGW456L13_607 at 700.235 kb on - strand, within PfGW456L13_607 at 700.235 kb on - strand, within PfGW456L13_607 at 700.339 kb on + strand, within PfGW456L13_607 at 700.340 kb on - strand, within PfGW456L13_607 at 700.444 kb on - strand, within PfGW456L13_607 at 700.799 kb on - strand, within PfGW456L13_607 at 700.799 kb on - strand, within PfGW456L13_607 at 700.849 kb on + strand at 700.849 kb on + strand at 700.849 kb on + strand at 700.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (C) remove 698,021 + PfGW456L13_604 0.82 -0.0 698,022 - PfGW456L13_604 0.82 +0.3 698,022 - PfGW456L13_604 0.82 +1.0 698,022 - PfGW456L13_604 0.82 +0.9 698,022 - PfGW456L13_604 0.82 +0.2 698,129 + +1.6 698,129 + -0.5 698,129 + +0.4 698,129 + -0.3 698,129 + +0.5 698,129 + -0.3 698,130 - +1.3 698,218 + -0.5 698,219 - -0.6 698,219 - -1.2 698,219 - +0.2 698,219 - +0.0 698,219 - +1.7 698,219 - -0.3 698,258 + +0.7 698,258 + +0.7 698,285 - -1.0 698,285 - +0.7 698,460 + PfGW456L13_605 0.20 -1.9 698,461 - PfGW456L13_605 0.20 +0.4 698,580 + PfGW456L13_605 0.39 +0.8 698,581 - PfGW456L13_605 0.39 -1.2 698,939 + +0.8 698,940 - +0.4 698,940 - +0.7 698,940 - -0.9 698,940 - +1.5 698,940 - +0.3 698,940 - +1.0 698,940 - -0.0 698,940 - +0.3 698,940 - -0.6 698,940 - -0.0 698,940 - +0.5 698,940 - +0.2 698,968 + +0.4 698,968 + +0.7 698,968 + -0.5 698,968 + +0.9 698,969 - +0.2 698,969 - -1.2 698,969 - -0.4 698,969 - -0.3 698,969 - -0.3 698,980 + +1.2 698,980 + +0.7 698,980 + -0.7 698,980 + +0.3 698,980 + +0.4 698,980 + -0.6 698,980 + +0.9 698,980 + +1.8 698,980 + +0.6 698,980 + +0.4 698,980 + -0.4 698,981 - +0.7 698,981 - +0.4 698,981 - +0.7 698,981 - +0.9 698,981 - +0.1 698,981 - -1.2 698,981 - -1.0 698,981 - +0.8 698,981 - -0.3 698,981 - +0.5 698,981 - -0.0 698,981 - -0.7 698,981 - +0.5 698,981 - +0.5 698,984 + +1.0 698,984 + +1.1 698,984 + -0.5 698,984 + +1.5 698,984 + -0.9 698,984 + +0.3 698,984 + +0.3 698,984 + -0.2 698,984 + +0.9 698,984 + -0.1 698,984 + -0.7 698,984 + +1.3 698,985 - -0.1 698,985 - -0.5 698,985 - -0.1 698,985 - +1.2 698,985 - -0.5 698,985 - +0.0 698,985 - -0.1 698,992 + -1.2 698,992 + -0.5 699,023 + -0.7 699,023 + +0.3 699,023 + +1.2 699,024 - +2.0 699,024 - +0.5 699,024 - +1.0 699,026 + -0.6 699,026 + +0.4 699,026 + -0.1 699,026 + +0.3 699,026 + +0.8 699,026 + -0.4 699,026 + +0.3 699,026 + +0.6 699,027 - +0.2 699,027 - -1.3 699,027 - -0.2 699,027 - -0.1 699,027 - +0.2 699,027 - +0.5 699,027 - -1.2 699,027 - +1.7 699,030 + +0.3 699,030 + +0.8 699,030 + +0.2 699,030 + -0.3 699,030 + +0.5 699,030 + +0.5 699,030 + -0.1 699,031 - -0.7 699,031 - -1.2 699,031 - -0.6 699,031 - +0.7 699,031 - -0.1 699,031 - +1.4 699,031 - -0.8 699,031 - +0.0 699,031 - -0.6 699,031 - +0.7 699,031 - -0.6 699,031 - +1.7 699,031 - -2.7 699,031 - +1.7 699,035 + +0.5 699,035 + -0.5 699,035 + +0.3 699,035 + -0.5 699,036 - +0.2 699,036 - -0.5 699,036 - -0.7 699,036 - +0.6 699,077 + PfGW456L13_606 0.12 +1.7 699,078 - PfGW456L13_606 0.13 -0.1 699,135 - PfGW456L13_606 0.19 -0.7 699,135 - PfGW456L13_606 0.19 +0.6 699,161 + PfGW456L13_606 0.22 +0.6 699,161 + PfGW456L13_606 0.22 +0.1 699,161 + PfGW456L13_606 0.22 -0.2 699,161 + PfGW456L13_606 0.22 +0.7 699,161 + PfGW456L13_606 0.22 +0.4 699,161 + PfGW456L13_606 0.22 +0.2 699,161 + PfGW456L13_606 0.22 +0.9 699,161 + PfGW456L13_606 0.22 +0.2 699,162 - PfGW456L13_606 0.22 +0.9 699,162 - PfGW456L13_606 0.22 +0.3 699,162 - PfGW456L13_606 0.22 +0.1 699,162 - PfGW456L13_606 0.22 +1.4 699,162 - PfGW456L13_606 0.22 -1.0 699,162 - PfGW456L13_606 0.22 -0.2 699,162 - PfGW456L13_606 0.22 -0.6 699,162 - PfGW456L13_606 0.22 +0.1 699,162 - PfGW456L13_606 0.22 +0.1 699,162 - PfGW456L13_606 0.22 +1.0 699,162 - PfGW456L13_606 0.22 -0.0 699,162 - PfGW456L13_606 0.22 +1.5 699,195 + PfGW456L13_606 0.26 -1.1 699,195 + PfGW456L13_606 0.26 -0.9 699,195 + PfGW456L13_606 0.26 -1.4 699,195 + PfGW456L13_606 0.26 -1.2 699,196 - PfGW456L13_606 0.26 -0.5 699,196 - +0.8 699,196 - PfGW456L13_606 0.26 +0.9 699,197 + PfGW456L13_606 0.26 -0.0 699,197 + PfGW456L13_606 0.26 -0.7 699,197 + PfGW456L13_606 0.26 -0.1 699,197 + PfGW456L13_606 0.26 -1.7 699,197 + PfGW456L13_606 0.26 +0.4 699,197 + PfGW456L13_606 0.26 -0.8 699,198 - PfGW456L13_606 0.26 +0.2 699,198 - PfGW456L13_606 0.26 +0.2 699,198 - PfGW456L13_606 0.26 -0.2 699,198 - PfGW456L13_606 0.26 +0.3 699,198 - PfGW456L13_606 0.26 +0.1 699,198 - PfGW456L13_606 0.26 -3.1 699,198 - PfGW456L13_606 0.26 +1.2 699,198 - PfGW456L13_606 0.26 +0.4 699,221 + PfGW456L13_606 0.28 +0.1 699,222 - PfGW456L13_606 0.29 -0.3 699,222 - PfGW456L13_606 0.29 +0.3 699,222 - PfGW456L13_606 0.29 -0.3 699,222 - PfGW456L13_606 0.29 +0.8 699,222 - PfGW456L13_606 0.29 -0.5 699,222 - PfGW456L13_606 0.29 +0.3 699,269 + PfGW456L13_606 0.34 +0.1 699,269 + PfGW456L13_606 0.34 +0.2 699,270 - PfGW456L13_606 0.34 -1.2 699,270 - PfGW456L13_606 0.34 +0.9 699,270 - PfGW456L13_606 0.34 +0.0 699,270 - PfGW456L13_606 0.34 +1.3 699,461 + PfGW456L13_606 0.55 -0.5 699,461 + PfGW456L13_606 0.55 -0.2 699,462 - PfGW456L13_606 0.55 +0.5 699,462 - PfGW456L13_606 0.55 +0.6 699,462 - PfGW456L13_606 0.55 +0.5 699,462 - PfGW456L13_606 0.55 +0.2 699,462 - PfGW456L13_606 0.55 +0.7 699,462 - PfGW456L13_606 0.55 -0.5 699,816 - +1.2 699,879 + +1.5 699,879 + -0.1 699,879 + -0.2 699,879 + +0.1 699,879 + -0.1 699,879 + +0.4 699,879 + -1.7 699,879 + -0.0 699,880 - -2.2 699,880 - +0.9 699,880 - +0.8 699,880 - +0.7 699,880 - -0.3 699,880 - -0.1 699,880 - +0.4 699,880 - -0.1 699,880 - +0.4 699,905 + +0.2 699,905 + +0.5 699,905 + +0.6 699,906 - +0.1 699,906 - +1.0 699,964 + PfGW456L13_607 0.10 +0.4 699,965 - PfGW456L13_607 0.11 -0.1 700,153 - PfGW456L13_607 0.28 -2.5 700,168 - PfGW456L13_607 0.30 +0.0 700,234 + PfGW456L13_607 0.36 -0.5 700,235 - PfGW456L13_607 0.36 +0.3 700,235 - PfGW456L13_607 0.36 +0.3 700,339 + PfGW456L13_607 0.45 +0.4 700,340 - PfGW456L13_607 0.46 +1.4 700,444 - PfGW456L13_607 0.55 -0.3 700,799 - PfGW456L13_607 0.88 -0.1 700,799 - PfGW456L13_607 0.88 -0.1 700,849 + +0.3 700,849 + -1.7 700,849 + +1.2 700,850 - +0.5
Or see this region's nucleotide sequence