Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3629

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
4,084,728	+				+2.0
4,084,729	-				+1.3
4,084,729	-				+0.1
4,084,729	-				+0.4
4,084,729	-				-0.1
4,084,736	+				-0.6
4,084,736	+				+0.6
4,084,737	-				-0.3
4,084,745	+				-0.4
4,084,745	+				-3.3
4,084,746	-				-1.0
4,084,746	-				+1.3
4,084,760	-		PfGW456L13_3628	0.11	-1.1
4,084,764	+		PfGW456L13_3628	0.12	-0.8
4,084,764	+		PfGW456L13_3628	0.12	-0.0
4,084,764	+		PfGW456L13_3628	0.12	-0.2
4,084,765	-		PfGW456L13_3628	0.12	+0.1
4,084,765	-		PfGW456L13_3628	0.12	+1.2
4,084,803	+		PfGW456L13_3628	0.16	+0.1
4,084,803	+		PfGW456L13_3628	0.16	-0.8
4,084,803	+		PfGW456L13_3628	0.16	+0.8
4,084,804	-		PfGW456L13_3628	0.16	+0.4
4,084,804	-		PfGW456L13_3628	0.16	-0.2
4,084,804	-		PfGW456L13_3628	0.16	-0.5
4,084,804	-		PfGW456L13_3628	0.16	+0.8
4,084,843	-		PfGW456L13_3628	0.21	-0.2
4,084,898	+		PfGW456L13_3628	0.28	+0.6
4,084,899	-		PfGW456L13_3628	0.28	+0.7
4,084,899	-		PfGW456L13_3628	0.28	+0.7
4,084,899	-		PfGW456L13_3628	0.28	-0.8
4,084,912	+		PfGW456L13_3628	0.29	-2.2
4,084,912	+		PfGW456L13_3628	0.29	-1.4
4,084,913	-		PfGW456L13_3628	0.29	-0.3
4,084,913	-		PfGW456L13_3628	0.29	+0.0
4,084,913	-		PfGW456L13_3628	0.29	+0.4
4,084,985	+		PfGW456L13_3628	0.38	-0.2
4,084,985	+		PfGW456L13_3628	0.38	-0.8
4,084,986	-		PfGW456L13_3628	0.38	-0.4
4,085,028	+		PfGW456L13_3628	0.43	-0.7
4,085,028	+		PfGW456L13_3628	0.43	+0.2
4,085,028	+		PfGW456L13_3628	0.43	+1.1
4,085,028	+		PfGW456L13_3628	0.43	-0.3
4,085,029	-		PfGW456L13_3628	0.43	+1.2
4,085,029	-		PfGW456L13_3628	0.43	+1.0
4,085,029	-		PfGW456L13_3628	0.43	-1.0
4,085,029	-		PfGW456L13_3628	0.43	-0.8
4,085,029	-		PfGW456L13_3628	0.43	-0.1
4,085,029	-		PfGW456L13_3628	0.43	+0.4
4,085,029	-		PfGW456L13_3628	0.43	-0.1
4,085,029	-		PfGW456L13_3628	0.43	-1.2
4,085,029	-		PfGW456L13_3628	0.43	+1.6
4,085,078	+		PfGW456L13_3628	0.49	+0.2
4,085,078	+		PfGW456L13_3628	0.49	-0.3
4,085,092	+		PfGW456L13_3628	0.51	+0.7
4,085,093	-		PfGW456L13_3628	0.51	-1.0
4,085,093	-		PfGW456L13_3628	0.51	-3.3
4,085,096	-		PfGW456L13_3628	0.51	-0.5
4,085,208	-		PfGW456L13_3628	0.65	-2.2
4,085,208	-		PfGW456L13_3628	0.65	+0.4
4,085,271	-		PfGW456L13_3628	0.72	+0.7
4,085,271	-		PfGW456L13_3628	0.72	+0.9
4,085,273	+		PfGW456L13_3628	0.72	+0.3
4,085,274	-		PfGW456L13_3628	0.73	+0.4
4,085,297	-		PfGW456L13_3628	0.75	+1.5
4,085,365	-		PfGW456L13_3628	0.83	+0.1
4,085,375	+		PfGW456L13_3628	0.85	+0.8
4,085,375	+		PfGW456L13_3628	0.85	-0.2
4,085,376	-		PfGW456L13_3628	0.85	-0.7
4,085,376	-		PfGW456L13_3628	0.85	-1.1
4,085,376	-		PfGW456L13_3628	0.85	-0.2
4,085,376	-		PfGW456L13_3628	0.85	+1.1
4,085,400	+		PfGW456L13_3628	0.88	-0.7
4,085,401	-		PfGW456L13_3628	0.88	-0.9
4,085,405	+		PfGW456L13_3628	0.88	-2.2
4,085,405	+		PfGW456L13_3628	0.88	+0.3
4,085,405	+		PfGW456L13_3628	0.88	+0.4
4,085,406	-		PfGW456L13_3628	0.88	-0.2
4,085,451	+				+0.8
4,085,452	-				-2.5
4,085,466	-				+0.2
4,085,525	+				-0.1
4,085,525	+				+0.2
4,085,526	-				-0.6
4,085,526	-				-0.8
4,085,533	+				+0.1
4,085,533	+				-0.4
4,085,534	-				+0.1
4,085,534	-				-0.6
4,085,633	+				-0.4
4,085,633	+				-0.9
4,085,634	-				-1.0
4,085,636	+				-0.9
4,085,637	-				-0.4
4,085,637	-				-0.0
4,085,671	+				+0.5
4,085,671	+				-0.6
4,085,671	+				-0.0
4,085,671	+				+0.2
4,085,671	+				+0.5
4,085,671	+				-0.5
4,085,671	+				-0.5
4,085,671	+				+1.0
4,085,671	+				+0.7
4,085,671	+				-0.7
4,085,671	+				+0.8
4,085,671	+				+0.7
4,085,671	+				-0.8
4,085,672	-				+1.0
4,085,672	-				+0.3
4,085,672	-				-0.5
4,085,672	-				+0.2
4,085,672	-				+0.1
4,085,672	-				-1.6
4,085,672	-				-1.1
4,085,694	+				+0.4
4,085,694	+				+1.0
4,085,695	-				+0.8
4,085,712	+				+1.4
4,085,712	+				-0.1
4,085,713	-				+0.1
4,085,758	-		PfGW456L13_3629	0.17	+1.2
4,086,015	+		PfGW456L13_3629	0.84	+1.1
4,086,047	-				+1.6
4,086,096	+				+0.8
4,086,096	+				+0.1
4,086,096	+				-0.1
4,086,096	+				-0.9
4,086,096	+				+0.6
4,086,097	-				-0.6
4,086,100	+				-0.7
4,086,101	-				-0.2
4,086,101	-				+2.1
4,086,101	-				+0.3
4,086,101	-				+0.4
4,086,101	-				+0.5
4,086,101	-				+0.2
4,086,308	+				+0.4
4,086,308	+		PfGW456L13_3630	0.12	-3.6
4,086,308	+		PfGW456L13_3630	0.12	-1.7
4,086,309	-		PfGW456L13_3630	0.13	-0.3
4,086,309	-		PfGW456L13_3630	0.13	-0.2
4,086,309	-		PfGW456L13_3630	0.13	-0.3
4,086,309	-		PfGW456L13_3630	0.13	-0.2
4,086,324	+		PfGW456L13_3630	0.14	+0.1
4,086,509	+		PfGW456L13_3630	0.30	-1.1
4,086,510	-		PfGW456L13_3630	0.30	+2.2
4,086,510	-		PfGW456L13_3630	0.30	+0.2
4,086,510	-		PfGW456L13_3630	0.30	+0.6
4,086,563	+		PfGW456L13_3630	0.35	+0.7
4,086,563	+		PfGW456L13_3630	0.35	-0.7
4,086,564	-		PfGW456L13_3630	0.35	-0.1
4,086,564	-		PfGW456L13_3630	0.35	-1.2
4,086,854	+		PfGW456L13_3630	0.61	+0.7
4,086,855	-		PfGW456L13_3630	0.61	-0.0
4,086,881	+		PfGW456L13_3630	0.64	+0.5
4,086,881	+		PfGW456L13_3630	0.64	-1.0
4,086,881	+		PfGW456L13_3630	0.64	+1.6
4,086,882	-		PfGW456L13_3630	0.64	-0.7
4,086,882	-		PfGW456L13_3630	0.64	-0.4
4,086,882	-		PfGW456L13_3630	0.64	+1.4
4,086,882	-		PfGW456L13_3630	0.64	-0.1
4,086,905	+		PfGW456L13_3630	0.66	+0.8
4,086,905	+		PfGW456L13_3630	0.66	-0.1
4,086,906	-		PfGW456L13_3630	0.66	+0.5
4,087,022	+		PfGW456L13_3630	0.76	-0.2