Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2454

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
2,719,337	+		PfGW456L13_2453	0.62	+0.2
2,719,337	+		PfGW456L13_2453	0.62	-0.2
2,719,337	+		PfGW456L13_2453	0.62	-0.0
2,719,337	+		PfGW456L13_2453	0.62	+0.0
2,719,337	+		PfGW456L13_2453	0.62	+0.2
2,719,337	+				+1.0
2,719,347	+		PfGW456L13_2453	0.62	-0.6
2,719,496	+		PfGW456L13_2453	0.71	+0.2
2,719,532	+		PfGW456L13_2453	0.73	-0.8
2,719,532	+		PfGW456L13_2453	0.73	-0.0
2,719,532	+		PfGW456L13_2453	0.73	-1.4
2,719,533	-		PfGW456L13_2453	0.73	+0.4
2,719,533	-		PfGW456L13_2453	0.73	-0.6
2,719,629	-		PfGW456L13_2453	0.79	-0.2
2,719,662	+		PfGW456L13_2453	0.81	+0.4
2,719,662	+		PfGW456L13_2453	0.81	-0.2
2,719,663	-		PfGW456L13_2453	0.81	+0.2
2,719,692	+		PfGW456L13_2453	0.83	+0.2
2,719,692	+		PfGW456L13_2453	0.83	+0.5
2,719,692	+		PfGW456L13_2453	0.83	+0.8
2,719,692	+		PfGW456L13_2453	0.83	-0.1
2,719,692	+		PfGW456L13_2453	0.83	-0.0
2,719,692	+		PfGW456L13_2453	0.83	+1.0
2,719,692	+		PfGW456L13_2453	0.83	+1.1
2,719,693	-		PfGW456L13_2453	0.83	+0.4
2,719,693	-		PfGW456L13_2453	0.83	+0.4
2,719,693	-		PfGW456L13_2453	0.83	-0.4
2,719,693	-		PfGW456L13_2453	0.83	+0.3
2,719,693	-		PfGW456L13_2453	0.83	+0.2
2,719,693	-		PfGW456L13_2453	0.83	-0.8
2,719,693	-		PfGW456L13_2453	0.83	-0.4
2,719,693	-		PfGW456L13_2453	0.83	+1.4
2,719,693	-		PfGW456L13_2453	0.83	-0.8
2,719,854	-				+1.0
2,719,859	+				-0.0
2,719,859	+				-1.1
2,719,859	+				+1.0
2,719,859	+				-0.0
2,719,859	+				+0.8
2,719,860	-				-0.6
2,719,860	-				+2.0
2,719,860	-				+0.2
2,719,869	-				+0.6
2,719,981	+				+0.8
2,719,981	+				+0.1
2,719,982	-				+0.9
2,719,982	-				-0.5
2,719,982	-				+0.8
2,720,004	+				-0.1
2,720,004	+				+0.6
2,720,005	-				+0.8
2,720,005	-				+0.1
2,720,028	+				+0.7
2,720,028	+				+1.4
2,720,028	+				-0.1
2,720,029	-				-1.4
2,720,064	+				-0.9
2,720,065	-				+0.4
2,720,065	-				+1.0
2,720,176	+				+0.1
2,720,176	+				+1.0
2,720,176	+				+1.4
2,720,176	+				+0.4
2,720,176	+				-0.1
2,720,176	+				+0.4
2,720,177	-				-2.4
2,720,177	-				-1.2
2,720,177	-				-0.5
2,720,177	-				+0.5
2,720,221	+				+0.1
2,720,272	-				-0.4
2,720,272	-				+0.0
2,720,272	-				-0.6
2,720,340	+				-2.0
2,720,341	-				+0.1
2,720,478	+				-0.9
2,720,478	+				-0.1
2,720,478	+				-2.1
2,720,479	-				+0.0
2,720,479	-				-1.6
2,720,479	-				+0.4
2,720,485	-				-0.4
2,720,662	-		PfGW456L13_2454	0.17	+1.3
2,721,035	+		PfGW456L13_2454	0.35	-0.2
2,721,456	+		PfGW456L13_2454	0.54	+0.6
2,721,456	+		PfGW456L13_2454	0.54	+1.0
2,721,671	+		PfGW456L13_2454	0.64	+1.0
2,721,812	+		PfGW456L13_2454	0.71	+0.3
2,721,812	+		PfGW456L13_2454	0.71	-1.6
2,721,813	-		PfGW456L13_2454	0.71	+0.5
2,721,813	-		PfGW456L13_2454	0.71	+0.4
2,721,813	-		PfGW456L13_2454	0.71	-0.6
2,721,818	+		PfGW456L13_2454	0.71	-0.5
2,721,818	+		PfGW456L13_2454	0.71	+0.0
2,721,818	+		PfGW456L13_2454	0.71	+2.2
2,721,818	+		PfGW456L13_2454	0.71	-0.9
2,721,818	+		PfGW456L13_2454	0.71	+0.4
2,721,818	+		PfGW456L13_2454	0.71	-0.5
2,721,818	+		PfGW456L13_2454	0.71	+1.0
2,721,819	-		PfGW456L13_2454	0.71	-0.3
2,721,819	-		PfGW456L13_2454	0.71	-0.0
2,721,819	-		PfGW456L13_2454	0.71	-0.7
2,721,819	-		PfGW456L13_2454	0.71	-0.0
2,721,819	-		PfGW456L13_2454	0.71	-0.1
2,721,819	-		PfGW456L13_2454	0.71	-2.7
2,721,940	+		PfGW456L13_2454	0.77	+0.1
2,721,940	+		PfGW456L13_2454	0.77	-1.0
2,721,968	+		PfGW456L13_2454	0.78	+0.0
2,722,212	-		PfGW456L13_2454	0.89	+0.7
2,722,459	+				-1.0
2,722,463	+				-1.4
2,722,463	+				-1.9
2,722,464	-				-1.0
2,722,464	-				-0.4
2,722,464	-				+0.1
2,722,464	-				+0.8
2,722,464	-				+0.8
2,722,464	-				+0.7
2,722,483	-				+1.0
2,722,483	-				+1.0
2,722,542	+				-0.6
2,722,542	+				-1.2
2,722,543	-				-0.0
2,722,543	-				-1.2
2,722,543	-				-0.0
2,722,543	-				+2.4
2,722,635	+				-0.6
2,722,636	-				-0.3
2,722,645	+				-0.3
2,722,645	+				-0.6
2,722,645	+				-1.4
2,722,645	+				-0.9
2,722,645	+				-1.3
2,722,645	+				-0.2
2,722,646	-				+0.8
2,722,646	-				+1.4
2,722,646	-				+0.2
2,722,646	-				+0.4
2,722,646	-				-0.2
2,722,646	-				-0.7
2,722,655	+				-0.7
2,722,655	+				-1.4
2,722,655	+				-2.1
2,722,655	+				+0.1
2,722,655	+				-0.0
2,722,656	-				-0.0
2,722,660	-				-0.1
2,722,719	+				-0.8
2,722,720	-				+1.1
2,722,723	-				+1.3
2,722,723	-				+0.8
2,722,723	-				+1.0
2,722,723	-				-1.3
2,722,786	+				+1.0
2,722,787	-				+0.5
2,722,811	+				+0.7
2,722,812	-				+1.7
2,722,812	-				+0.9
2,722,812	-				+0.1
2,722,982	-		PfGW456L13_2455	0.15	+1.0
2,723,160	-		PfGW456L13_2455	0.28	-0.6
2,723,160	-		PfGW456L13_2455	0.28	-0.0
2,723,160	-		PfGW456L13_2455	0.28	-0.0
2,723,160	-		PfGW456L13_2455	0.28	+0.9
2,723,163	+		PfGW456L13_2455	0.28	-1.9
2,723,164	-		PfGW456L13_2455	0.29	-0.0
2,723,164	-		PfGW456L13_2455	0.29	+0.4
2,723,164	-		PfGW456L13_2455	0.29	+0.6
2,723,172	+		PfGW456L13_2455	0.29	-0.1
2,723,173	-		PfGW456L13_2455	0.29	+0.0
2,723,200	+		PfGW456L13_2455	0.31	-0.0
2,723,200	+		PfGW456L13_2455	0.31	-0.4
2,723,200	+		PfGW456L13_2455	0.31	+0.8
2,723,200	+		PfGW456L13_2455	0.31	+0.3
2,723,200	+		PfGW456L13_2455	0.31	-0.2
2,723,200	+		PfGW456L13_2455	0.31	-0.2
2,723,201	-				-0.0
2,723,201	-		PfGW456L13_2455	0.31	+0.6
2,723,201	-		PfGW456L13_2455	0.31	+2.6
2,723,201	-		PfGW456L13_2455	0.31	+0.1
2,723,201	-		PfGW456L13_2455	0.31	-0.3
2,723,201	-		PfGW456L13_2455	0.31	+0.8
2,723,272	+		PfGW456L13_2455	0.37	-0.5
2,723,272	+		PfGW456L13_2455	0.37	+0.3
2,723,272	+		PfGW456L13_2455	0.37	+0.3
2,723,272	+		PfGW456L13_2455	0.37	+0.5
2,723,272	+		PfGW456L13_2455	0.37	+1.8
2,723,273	-		PfGW456L13_2455	0.37	+0.7
2,723,273	-		PfGW456L13_2455	0.37	+0.9
2,723,273	-		PfGW456L13_2455	0.37	+1.1
2,723,435	-		PfGW456L13_2455	0.49	+0.5