Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1236

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
1,375,693	-		PfGW456L13_1235	0.13	+0.7
1,375,693	-		PfGW456L13_1235	0.13	+1.2
1,375,693	-		PfGW456L13_1235	0.13	+2.0
1,375,862	+		PfGW456L13_1235	0.28	+2.3
1,375,862	+		PfGW456L13_1235	0.28	+2.8
1,375,862	+		PfGW456L13_1235	0.28	+2.4
1,375,863	-		PfGW456L13_1235	0.28	+2.2
1,375,863	-		PfGW456L13_1235	0.28	+0.7
1,375,863	-		PfGW456L13_1235	0.28	+3.0
1,376,040	+		PfGW456L13_1235	0.45	+1.9
1,376,040	+		PfGW456L13_1235	0.45	+2.2
1,376,040	+		PfGW456L13_1235	0.45	+1.5
1,376,040	+		PfGW456L13_1235	0.45	+2.2
1,376,040	+		PfGW456L13_1235	0.45	+2.1
1,376,040	+		PfGW456L13_1235	0.45	+2.9
1,376,040	+		PfGW456L13_1235	0.45	+2.6
1,376,040	+		PfGW456L13_1235	0.45	+2.5
1,376,040	+		PfGW456L13_1235	0.45	+2.6
1,376,041	-		PfGW456L13_1235	0.45	+2.6
1,376,041	-		PfGW456L13_1235	0.45	+2.2
1,376,041	-		PfGW456L13_1235	0.45	+2.7
1,376,041	-		PfGW456L13_1235	0.45	+1.8
1,376,041	-		PfGW456L13_1235	0.45	+2.2
1,376,041	-		PfGW456L13_1235	0.45	+1.8
1,376,041	-		PfGW456L13_1235	0.45	+2.2
1,376,041	-		PfGW456L13_1235	0.45	+2.0
1,376,041	-		PfGW456L13_1235	0.45	+0.0
1,376,041	-		PfGW456L13_1235	0.45	+2.8
1,376,165	+		PfGW456L13_1235	0.56	+2.1
1,376,166	-		PfGW456L13_1235	0.56	+3.2
1,376,246	+		PfGW456L13_1235	0.63	+3.0
1,376,411	+		PfGW456L13_1235	0.79	+3.2
1,376,419	+		PfGW456L13_1235	0.79	+1.0
1,376,419	+		PfGW456L13_1235	0.79	+3.4
1,376,544	+				+3.0
1,376,544	+				+2.7
1,376,544	+				+1.6
1,376,544	+				+3.0
1,376,544	+				+1.8
1,376,544	+				+1.5
1,376,544	+				+1.2
1,376,544	+				+2.6
1,376,544	+				+3.7
1,376,544	+				+2.1
1,376,545	-				+1.4
1,376,545	-				+2.2
1,376,545	-				+3.7
1,376,545	-				+2.0
1,376,545	-				+3.2
1,376,545	-				+2.4
1,376,545	-				+3.2
1,376,545	-				+3.0
1,376,630	+				+2.2
1,376,630	+				+2.3
1,376,630	+				+3.8
1,376,630	+				+3.1
1,376,630	+				+2.5
1,376,630	+				+2.9
1,376,630	+				+2.5
1,376,630	+				+2.6
1,376,630	+				+2.8
1,376,630	+				+3.1
1,376,630	+				+1.9
1,376,630	+				+3.6
1,376,630	+				+2.4
1,376,631	-				+2.8
1,376,631	-				+2.9
1,376,631	-				+2.5
1,376,631	-				+3.3
1,376,631	-				+1.7
1,376,631	-				+2.3
1,376,631	-				+2.3
1,376,631	-				+2.6
1,376,631	-				+0.2
1,376,631	-				+2.1
1,376,631	-				+2.3
1,376,632	+				+2.6
1,376,632	+				+2.8
1,376,632	+				+4.3
1,376,633	-				+0.9
1,376,633	-				+2.8
1,376,633	-				+1.9
1,376,633	-				+3.7
1,376,634	+				+2.2
1,376,634	+				+2.2
1,376,634	+				+2.2
1,376,634	+				+1.8
1,376,634	+				+2.8
1,376,635	-				+0.4
1,376,635	-				+1.9
1,376,635	-				+0.3
1,376,635	-				+1.2
1,376,635	-				-1.2
1,376,635	-				+0.5
1,376,635	-				-0.9
1,376,635	-				-1.0
1,376,635	-				+2.1
1,376,635	-				+2.0
1,376,635	-				+2.1
1,376,649	+				+2.4
1,376,650	-				+0.5
1,376,815	-		PfGW456L13_1236	0.12	-0.3
1,376,855	-		PfGW456L13_1236	0.15	+0.9
1,376,856	+		PfGW456L13_1236	0.15	+3.4
1,376,856	+		PfGW456L13_1236	0.15	+1.2
1,376,857	-		PfGW456L13_1236	0.15	+0.4
1,376,857	-		PfGW456L13_1236	0.15	+0.5
1,376,857	-		PfGW456L13_1236	0.15	-0.2
1,376,857	-		PfGW456L13_1236	0.15	-0.1
1,376,857	-		PfGW456L13_1236	0.15	+0.5
1,376,857	-		PfGW456L13_1236	0.15	-0.2
1,376,928	+		PfGW456L13_1236	0.20	+0.8
1,376,929	-		PfGW456L13_1236	0.20	+1.7
1,376,940	+		PfGW456L13_1236	0.21	+1.4
1,376,940	+		PfGW456L13_1236	0.21	+1.7
1,376,940	+		PfGW456L13_1236	0.21	+2.3
1,376,940	+		PfGW456L13_1236	0.21	+1.4
1,376,940	+		PfGW456L13_1236	0.21	+1.4
1,376,941	-		PfGW456L13_1236	0.21	-0.4
1,376,941	-		PfGW456L13_1236	0.21	-0.5
1,376,941	-		PfGW456L13_1236	0.21	+0.6
1,376,969	-		PfGW456L13_1236	0.23	+2.0
1,377,051	+		PfGW456L13_1236	0.29	+1.3
1,377,052	-		PfGW456L13_1236	0.29	+0.1
1,377,186	+		PfGW456L13_1236	0.39	+3.0
1,377,186	+		PfGW456L13_1236	0.39	+2.2
1,377,186	+		PfGW456L13_1236	0.39	+2.8
1,377,187	-		PfGW456L13_1236	0.39	-1.1
1,377,187	-		PfGW456L13_1236	0.39	+1.2
1,377,189	+		PfGW456L13_1236	0.39	+2.0
1,377,189	+		PfGW456L13_1236	0.39	+1.3
1,377,189	+		PfGW456L13_1236	0.39	+1.5
1,377,190	-		PfGW456L13_1236	0.39	+0.6
1,377,216	+		PfGW456L13_1236	0.41	+3.7
1,377,217	-		PfGW456L13_1236	0.41	-1.4
1,377,217	-		PfGW456L13_1236	0.41	+0.2
1,377,217	-		PfGW456L13_1236	0.41	+0.7
1,377,217	-		PfGW456L13_1236	0.41	-2.1
1,377,217	-		PfGW456L13_1236	0.41	+1.7
1,377,231	+		PfGW456L13_1236	0.42	+0.4
1,377,231	+		PfGW456L13_1236	0.42	+3.0
1,377,231	+		PfGW456L13_1236	0.42	+2.0
1,377,232	-		PfGW456L13_1236	0.42	+0.6
1,377,232	-		PfGW456L13_1236	0.42	+0.4
1,377,232	-		PfGW456L13_1236	0.42	-2.5
1,377,232	-		PfGW456L13_1236	0.42	+0.1
1,377,312	+		PfGW456L13_1236	0.48	+2.6
1,377,312	+		PfGW456L13_1236	0.48	+0.9
1,377,313	-		PfGW456L13_1236	0.48	+0.9
1,377,313	-		PfGW456L13_1236	0.48	-0.0
1,377,313	-		PfGW456L13_1236	0.48	+1.0
1,377,462	+		PfGW456L13_1236	0.59	+1.8
1,377,462	+		PfGW456L13_1236	0.59	+3.2
1,377,463	-		PfGW456L13_1236	0.59	-0.9
1,377,463	-		PfGW456L13_1236	0.59	+0.6
1,377,463	-		PfGW456L13_1236	0.59	-1.2
1,377,505	+		PfGW456L13_1236	0.62	-1.4
1,377,505	+		PfGW456L13_1236	0.62	+2.6
1,377,505	+		PfGW456L13_1236	0.62	+2.1
1,377,506	-		PfGW456L13_1236	0.62	+1.4
1,377,506	-		PfGW456L13_1236	0.62	+1.0
1,377,506	-		PfGW456L13_1236	0.62	-0.1
1,377,506	-		PfGW456L13_1236	0.62	-0.3
1,377,506	-		PfGW456L13_1236	0.62	-2.7
1,377,506	-		PfGW456L13_1236	0.62	-1.6
1,377,506	-		PfGW456L13_1236	0.62	-1.1
1,377,506	-		PfGW456L13_1236	0.62	+1.5
1,377,507	+		PfGW456L13_1236	0.62	+2.3
1,377,508	-		PfGW456L13_1236	0.62	+0.6
1,377,706	+		PfGW456L13_1236	0.77	+2.2
1,377,706	+		PfGW456L13_1236	0.77	+1.7
1,377,706	+		PfGW456L13_1236	0.77	+2.8
1,377,707	-		PfGW456L13_1236	0.77	+1.9
1,377,974	+				+2.2
1,377,975	-				+0.0
1,378,054	+				+2.1
1,378,072	+				+2.8
1,378,072	+				+3.2
1,378,073	-				+1.3
1,378,073	-				+0.9
1,378,073	-				+1.0
1,378,073	-				+0.7
1,378,073	-				+1.7
1,378,073	-				-0.1
1,378,177	+				-0.2