Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22335 and PS417_22340 are separated by 156 nucleotides PS417_22340 and PS417_22345 are separated by 18 nucleotides PS417_22345 and PS417_22350 are separated by 173 nucleotides
PS417_22335: PS417_22335 - ornithine carbamoyltransferase, at 4,838,571 to 4,839,581
_22335
PS417_22340: PS417_22340 - carbamate kinase, at 4,839,738 to 4,840,667
_22340
PS417_22345: PS417_22345 - acetyl-CoA carboxylase, at 4,840,686 to 4,841,048
_22345
PS417_22350: PS417_22350 - Fis family transcriptional regulator, at 4,841,222 to 4,842,730
_22350
Position (kb)
4839
4840
4841 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4838.799 kb on + strand, within PS417_22335 at 4838.799 kb on + strand, within PS417_22335 at 4838.799 kb on + strand, within PS417_22335 at 4838.800 kb on - strand, within PS417_22335 at 4838.800 kb on - strand, within PS417_22335 at 4839.045 kb on + strand, within PS417_22335 at 4839.046 kb on - strand, within PS417_22335 at 4839.046 kb on - strand, within PS417_22335 at 4839.080 kb on + strand, within PS417_22335 at 4839.539 kb on + strand at 4839.540 kb on - strand at 4839.580 kb on - strand at 4839.587 kb on - strand at 4839.587 kb on - strand at 4839.670 kb on + strand at 4839.670 kb on + strand at 4839.737 kb on + strand at 4839.738 kb on - strand at 4839.818 kb on + strand at 4839.927 kb on + strand, within PS417_22340 at 4839.991 kb on - strand, within PS417_22340 at 4840.120 kb on - strand, within PS417_22340 at 4840.189 kb on - strand, within PS417_22340 at 4840.308 kb on + strand, within PS417_22340 at 4840.308 kb on + strand, within PS417_22340 at 4840.309 kb on - strand, within PS417_22340 at 4840.434 kb on - strand, within PS417_22340 at 4840.659 kb on + strand at 4840.660 kb on - strand at 4840.660 kb on - strand at 4840.670 kb on + strand at 4840.671 kb on - strand at 4840.685 kb on + strand at 4840.686 kb on - strand at 4840.747 kb on - strand, within PS417_22345 at 4840.752 kb on + strand, within PS417_22345 at 4840.752 kb on + strand, within PS417_22345 at 4840.752 kb on + strand, within PS417_22345 at 4840.753 kb on - strand, within PS417_22345 at 4840.753 kb on - strand, within PS417_22345 at 4840.753 kb on - strand, within PS417_22345 at 4841.008 kb on + strand, within PS417_22345 at 4841.008 kb on + strand, within PS417_22345 at 4841.047 kb on - strand at 4841.111 kb on + strand at 4841.111 kb on + strand at 4841.112 kb on - strand at 4841.113 kb on + strand at 4841.114 kb on - strand at 4841.114 kb on - strand at 4841.183 kb on - strand at 4841.183 kb on - strand at 4841.337 kb on - strand at 4841.337 kb on - strand at 4841.556 kb on - strand, within PS417_22350
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,838,799 + PS417_22335 0.23 -0.5 4,838,799 + PS417_22335 0.23 +0.1 4,838,799 + PS417_22335 0.23 +0.0 4,838,800 - PS417_22335 0.23 -0.0 4,838,800 - PS417_22335 0.23 +0.1 4,839,045 + PS417_22335 0.47 +0.0 4,839,046 - PS417_22335 0.47 -0.0 4,839,046 - PS417_22335 0.47 -0.5 4,839,080 + PS417_22335 0.50 +0.5 4,839,539 + -0.5 4,839,540 - +0.5 4,839,580 - +0.2 4,839,587 - -0.0 4,839,587 - -1.8 4,839,670 + +0.2 4,839,670 + -0.1 4,839,737 + +1.8 4,839,738 - +0.7 4,839,818 + -0.3 4,839,927 + PS417_22340 0.20 +1.1 4,839,991 - PS417_22340 0.27 -0.2 4,840,120 - PS417_22340 0.41 -0.0 4,840,189 - PS417_22340 0.48 +1.1 4,840,308 + PS417_22340 0.61 -0.9 4,840,308 + PS417_22340 0.61 +0.5 4,840,309 - PS417_22340 0.61 -0.2 4,840,434 - PS417_22340 0.75 -0.6 4,840,659 + -0.2 4,840,660 - -0.1 4,840,660 - +0.0 4,840,670 + -0.8 4,840,671 - -0.0 4,840,685 + +0.8 4,840,686 - -0.5 4,840,747 - PS417_22345 0.17 +0.7 4,840,752 + PS417_22345 0.18 +0.1 4,840,752 + PS417_22345 0.18 -0.2 4,840,752 + PS417_22345 0.18 -1.0 4,840,753 - PS417_22345 0.18 -0.4 4,840,753 - PS417_22345 0.18 +0.4 4,840,753 - PS417_22345 0.18 -0.2 4,841,008 + PS417_22345 0.89 +0.8 4,841,008 + PS417_22345 0.89 +1.1 4,841,047 - +0.2 4,841,111 + -0.5 4,841,111 + +0.5 4,841,112 - -0.6 4,841,113 + +0.1 4,841,114 - +0.1 4,841,114 - +0.0 4,841,183 - -0.8 4,841,183 - +0.2 4,841,337 - -0.3 4,841,337 - +1.2 4,841,556 - PS417_22350 0.22 -0.3
Or see this region's nucleotide sequence