Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22100 and PS417_22105 are separated by 17 nucleotides PS417_22105 and PS417_22110 overlap by 14 nucleotides PS417_22110 and PS417_22115 are separated by 210 nucleotides
PS417_22100: PS417_22100 - keto-deoxy-phosphogluconate aldolase, at 4,788,025 to 4,788,690
_22100
PS417_22105: PS417_22105 - 6-phosphogluconolactonase, at 4,788,708 to 4,789,421
_22105
PS417_22110: PS417_22110 - glucose-6-phosphate dehydrogenase, at 4,789,408 to 4,790,874
_22110
PS417_22115: PS417_22115 - transcriptional regulator, at 4,791,085 to 4,791,954
_22115
Position (kb)
4789
4790
4791 Strain fitness (log2 ratio)
-1
0
1 at 4790.367 kb on - strand, within PS417_22110 at 4790.511 kb on - strand, within PS417_22110 at 4791.006 kb on + strand at 4791.007 kb on - strand at 4791.012 kb on - strand at 4791.054 kb on + strand at 4791.796 kb on + strand, within PS417_22115 at 4791.796 kb on + strand, within PS417_22115 at 4791.796 kb on + strand, within PS417_22115 at 4791.796 kb on + strand, within PS417_22115 at 4791.796 kb on + strand, within PS417_22115 at 4791.797 kb on - strand, within PS417_22115 at 4791.797 kb on - strand, within PS417_22115
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,790,367 - PS417_22110 0.65 +1.4 4,790,511 - PS417_22110 0.75 -0.8 4,791,006 + +0.2 4,791,007 - -0.5 4,791,012 - +0.2 4,791,054 + +0.4 4,791,796 + PS417_22115 0.82 -0.8 4,791,796 + PS417_22115 0.82 -0.2 4,791,796 + PS417_22115 0.82 +0.6 4,791,796 + PS417_22115 0.82 -0.5 4,791,796 + PS417_22115 0.82 +0.6 4,791,797 - PS417_22115 0.82 +0.2 4,791,797 - PS417_22115 0.82 +0.2
Or see this region's nucleotide sequence