Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28060 and PS417_28065 are separated by 168 nucleotides PS417_28065 and PS417_28070 are separated by 70 nucleotides
PS417_28060: PS417_28060 - chemotaxis protein CheY, at 6,054,468 to 6,055,373
_28060
PS417_28065: PS417_28065 - transcriptional regulator PhoU, at 6,055,542 to 6,056,303
_28065
PS417_28070: PS417_28070 - phosphate ABC transporter ATP-binding protein, at 6,056,374 to 6,057,207
_28070
Position (kb)
6055
6056
6057 Strain fitness (log2 ratio)
-2
-1
0
1 at 6055.297 kb on + strand at 6055.368 kb on - strand at 6055.388 kb on - strand at 6055.388 kb on - strand at 6055.391 kb on - strand at 6055.459 kb on + strand at 6055.459 kb on + strand at 6055.543 kb on + strand at 6055.543 kb on + strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.544 kb on - strand at 6055.547 kb on + strand at 6055.548 kb on - strand at 6055.577 kb on + strand at 6055.654 kb on + strand, within PS417_28065 at 6055.655 kb on - strand, within PS417_28065 at 6056.327 kb on + strand at 6056.396 kb on + strand at 6056.396 kb on + strand at 6056.397 kb on - strand at 6056.397 kb on - strand at 6056.471 kb on + strand, within PS417_28070 at 6056.471 kb on + strand, within PS417_28070 at 6056.471 kb on + strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.472 kb on - strand, within PS417_28070 at 6056.825 kb on + strand, within PS417_28070 at 6056.826 kb on - strand, within PS417_28070 at 6056.925 kb on - strand, within PS417_28070 at 6057.089 kb on + strand, within PS417_28070 at 6057.224 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 6,055,297 + -0.4 6,055,368 - -0.1 6,055,388 - -0.5 6,055,388 - +0.3 6,055,391 - +0.1 6,055,459 + -0.5 6,055,459 + -0.5 6,055,543 + -0.4 6,055,543 + +0.1 6,055,544 - -0.2 6,055,544 - +0.0 6,055,544 - +0.9 6,055,544 - +0.1 6,055,544 - -0.2 6,055,544 - -0.3 6,055,544 - -1.6 6,055,544 - +1.3 6,055,547 + -0.1 6,055,548 - -1.0 6,055,577 + -2.4 6,055,654 + PS417_28065 0.15 -1.3 6,055,655 - PS417_28065 0.15 +1.5 6,056,327 + -1.0 6,056,396 + -0.4 6,056,396 + +0.8 6,056,397 - -0.7 6,056,397 - +0.3 6,056,471 + PS417_28070 0.12 +0.4 6,056,471 + PS417_28070 0.12 -0.7 6,056,471 + PS417_28070 0.12 +0.2 6,056,472 - PS417_28070 0.12 -0.4 6,056,472 - PS417_28070 0.12 +0.3 6,056,472 - PS417_28070 0.12 +0.0 6,056,472 - PS417_28070 0.12 -0.4 6,056,472 - PS417_28070 0.12 +0.2 6,056,472 - PS417_28070 0.12 +0.1 6,056,825 + PS417_28070 0.54 -0.1 6,056,826 - PS417_28070 0.54 +0.5 6,056,925 - PS417_28070 0.66 -0.2 6,057,089 + PS417_28070 0.86 +0.5 6,057,224 + +0.0
Or see this region's nucleotide sequence