Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4322 and PfGW456L13_4323 overlap by 4 nucleotides PfGW456L13_4323 and PfGW456L13_4324 are separated by 1 nucleotides PfGW456L13_4324 and PfGW456L13_4325 are separated by 43 nucleotides
PfGW456L13_4322 - CheW domain protein, at 4,834,540 to 4,835,481
_4322
PfGW456L13_4323 - hypothetical protein, at 4,835,478 to 4,835,606
_4323
PfGW456L13_4324 - Chromosome (plasmid) partitioning protein ParA, at 4,835,608 to 4,836,396
_4324
PfGW456L13_4325 - Flagellar motor rotation protein MotB, at 4,836,440 to 4,837,330
_4325
Position (kb)
4835
4836 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4834.787 kb on + strand, within PfGW456L13_4322 at 4834.787 kb on + strand, within PfGW456L13_4322 at 4834.788 kb on - strand, within PfGW456L13_4322 at 4834.788 kb on - strand, within PfGW456L13_4322 at 4834.788 kb on - strand, within PfGW456L13_4322 at 4834.943 kb on + strand, within PfGW456L13_4322 at 4834.943 kb on + strand, within PfGW456L13_4322 at 4834.944 kb on - strand, within PfGW456L13_4322 at 4835.064 kb on + strand, within PfGW456L13_4322 at 4835.284 kb on + strand, within PfGW456L13_4322 at 4835.429 kb on + strand at 4835.429 kb on + strand at 4835.429 kb on + strand at 4835.429 kb on + strand at 4835.466 kb on + strand at 4835.554 kb on + strand, within PfGW456L13_4323 at 4835.554 kb on + strand, within PfGW456L13_4323 at 4835.554 kb on + strand, within PfGW456L13_4323 at 4835.554 kb on + strand, within PfGW456L13_4323 at 4835.554 kb on + strand, within PfGW456L13_4323 at 4835.555 kb on - strand, within PfGW456L13_4323 at 4835.555 kb on - strand, within PfGW456L13_4323 at 4835.589 kb on + strand, within PfGW456L13_4323 at 4835.663 kb on + strand at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.753 kb on + strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4835.754 kb on - strand, within PfGW456L13_4324 at 4836.219 kb on - strand, within PfGW456L13_4324 at 4836.257 kb on + strand at 4836.258 kb on - strand, within PfGW456L13_4324 at 4836.258 kb on - strand, within PfGW456L13_4324 at 4836.322 kb on + strand at 4836.323 kb on - strand at 4836.436 kb on + strand at 4836.436 kb on + strand at 4836.436 kb on + strand at 4836.437 kb on - strand at 4836.437 kb on - strand at 4836.449 kb on + strand at 4836.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,834,787 + PfGW456L13_4322 0.26 -1.3 4,834,787 + PfGW456L13_4322 0.26 -1.4 4,834,788 - PfGW456L13_4322 0.26 +0.6 4,834,788 - PfGW456L13_4322 0.26 -0.8 4,834,788 - PfGW456L13_4322 0.26 -0.5 4,834,943 + PfGW456L13_4322 0.43 -1.1 4,834,943 + PfGW456L13_4322 0.43 -1.6 4,834,944 - PfGW456L13_4322 0.43 -1.1 4,835,064 + PfGW456L13_4322 0.56 -2.2 4,835,284 + PfGW456L13_4322 0.79 -1.4 4,835,429 + +1.2 4,835,429 + +0.7 4,835,429 + +0.5 4,835,429 + -1.8 4,835,466 + +0.8 4,835,554 + PfGW456L13_4323 0.59 -0.3 4,835,554 + PfGW456L13_4323 0.59 +0.7 4,835,554 + PfGW456L13_4323 0.59 +0.7 4,835,554 + PfGW456L13_4323 0.59 +0.3 4,835,554 + PfGW456L13_4323 0.59 -1.1 4,835,555 - PfGW456L13_4323 0.60 +0.3 4,835,555 - PfGW456L13_4323 0.60 -1.6 4,835,589 + PfGW456L13_4323 0.86 -2.2 4,835,663 + -0.7 4,835,753 + PfGW456L13_4324 0.18 -0.6 4,835,753 + PfGW456L13_4324 0.18 -0.4 4,835,753 + PfGW456L13_4324 0.18 +2.1 4,835,753 + PfGW456L13_4324 0.18 +0.6 4,835,753 + PfGW456L13_4324 0.18 -0.3 4,835,753 + PfGW456L13_4324 0.18 -0.1 4,835,753 + PfGW456L13_4324 0.18 -0.8 4,835,753 + PfGW456L13_4324 0.18 -1.0 4,835,753 + PfGW456L13_4324 0.18 +1.1 4,835,753 + PfGW456L13_4324 0.18 -2.0 4,835,753 + PfGW456L13_4324 0.18 -0.5 4,835,753 + PfGW456L13_4324 0.18 +0.3 4,835,754 - PfGW456L13_4324 0.19 +0.9 4,835,754 - PfGW456L13_4324 0.19 +0.6 4,835,754 - PfGW456L13_4324 0.19 -0.9 4,835,754 - PfGW456L13_4324 0.19 +0.1 4,835,754 - PfGW456L13_4324 0.19 -1.0 4,835,754 - PfGW456L13_4324 0.19 +0.3 4,835,754 - -0.3 4,835,754 - PfGW456L13_4324 0.19 -1.0 4,835,754 - PfGW456L13_4324 0.19 -0.8 4,835,754 - PfGW456L13_4324 0.19 +1.4 4,835,754 - PfGW456L13_4324 0.19 -2.0 4,835,754 - PfGW456L13_4324 0.19 -1.7 4,835,754 - PfGW456L13_4324 0.19 -0.7 4,835,754 - PfGW456L13_4324 0.19 +0.2 4,835,754 - PfGW456L13_4324 0.19 -1.4 4,835,754 - PfGW456L13_4324 0.19 -2.4 4,836,219 - PfGW456L13_4324 0.77 -1.8 4,836,257 + +0.3 4,836,258 - PfGW456L13_4324 0.82 +0.7 4,836,258 - PfGW456L13_4324 0.82 -0.8 4,836,322 + -1.0 4,836,323 - +0.2 4,836,436 + -1.5 4,836,436 + -1.2 4,836,436 + +0.4 4,836,437 - +0.7 4,836,437 - -0.7 4,836,449 + -0.4 4,836,450 - +0.6
Or see this region's nucleotide sequence