Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_415 and PfGW456L13_416 are separated by 84 nucleotides PfGW456L13_416 and PfGW456L13_417 are separated by 307 nucleotides PfGW456L13_417 and PfGW456L13_418 are separated by 437 nucleotides
PfGW456L13_415 - hypothetical protein, at 478,624 to 478,923
_415
PfGW456L13_416 - Transcriptional regulator, Cro/CI family, at 479,008 to 479,298
_416
PfGW456L13_417 - hypothetical protein, at 479,606 to 479,728
_417
PfGW456L13_418 - hypothetical protein, at 480,166 to 481,431
_418
Position (kb) 479
480 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 478.616 kb on + strand at 478.616 kb on + strand at 478.616 kb on + strand at 478.616 kb on + strand at 478.620 kb on + strand at 478.621 kb on - strand at 478.621 kb on - strand at 478.657 kb on + strand, within PfGW456L13_415 at 478.657 kb on + strand, within PfGW456L13_415 at 478.657 kb on + strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.658 kb on - strand, within PfGW456L13_415 at 478.661 kb on + strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.662 kb on - strand, within PfGW456L13_415 at 478.846 kb on + strand, within PfGW456L13_415 at 478.846 kb on + strand, within PfGW456L13_415 at 478.846 kb on + strand, within PfGW456L13_415 at 478.847 kb on - strand, within PfGW456L13_415 at 478.921 kb on + strand at 478.953 kb on + strand at 478.953 kb on + strand at 478.953 kb on + strand at 478.954 kb on - strand at 478.979 kb on - strand at 479.004 kb on - strand at 479.127 kb on + strand, within PfGW456L13_416 at 479.133 kb on - strand, within PfGW456L13_416 at 479.166 kb on - strand, within PfGW456L13_416 at 479.251 kb on + strand, within PfGW456L13_416 at 479.252 kb on - strand, within PfGW456L13_416 at 479.252 kb on - strand, within PfGW456L13_416 at 479.252 kb on - strand, within PfGW456L13_416 at 479.252 kb on - strand, within PfGW456L13_416 at 479.252 kb on - strand, within PfGW456L13_416 at 479.253 kb on + strand, within PfGW456L13_416 at 479.296 kb on + strand at 479.297 kb on - strand at 479.297 kb on - strand at 479.337 kb on + strand at 479.338 kb on - strand at 479.338 kb on - strand at 479.338 kb on - strand at 479.374 kb on + strand at 479.374 kb on + strand at 479.374 kb on + strand at 479.375 kb on - strand at 479.375 kb on - strand at 479.375 kb on - strand at 479.387 kb on + strand at 479.387 kb on + strand at 479.387 kb on + strand at 479.387 kb on + strand at 479.387 kb on + strand at 479.387 kb on + strand at 479.387 kb on + strand at 479.388 kb on - strand at 479.388 kb on - strand at 479.440 kb on - strand at 479.465 kb on - strand at 479.515 kb on - strand at 479.515 kb on - strand at 479.515 kb on - strand at 479.524 kb on + strand at 479.524 kb on + strand at 479.524 kb on + strand at 479.525 kb on - strand at 479.525 kb on - strand at 479.616 kb on + strand at 479.616 kb on + strand at 479.616 kb on + strand at 479.617 kb on - strand at 479.617 kb on - strand at 479.617 kb on - strand at 479.726 kb on + strand at 479.727 kb on - strand at 479.756 kb on + strand at 479.756 kb on + strand at 479.757 kb on - strand at 479.757 kb on - strand at 479.757 kb on - strand at 479.757 kb on - strand at 479.757 kb on - strand at 479.795 kb on + strand at 479.795 kb on + strand at 479.796 kb on - strand at 479.806 kb on + strand at 479.817 kb on - strand at 479.817 kb on - strand at 479.817 kb on - strand at 479.817 kb on - strand at 479.856 kb on + strand at 479.856 kb on + strand at 479.857 kb on - strand at 479.886 kb on + strand at 479.886 kb on + strand at 479.886 kb on + strand at 479.887 kb on - strand at 479.887 kb on - strand at 479.887 kb on - strand at 479.891 kb on - strand at 479.938 kb on + strand at 479.991 kb on + strand at 480.162 kb on - strand at 480.248 kb on - strand at 480.306 kb on - strand, within PfGW456L13_418 at 480.332 kb on + strand, within PfGW456L13_418 at 480.391 kb on + strand, within PfGW456L13_418 at 480.401 kb on - strand, within PfGW456L13_418 at 480.447 kb on + strand, within PfGW456L13_418 at 480.707 kb on + strand, within PfGW456L13_418 at 480.708 kb on - strand, within PfGW456L13_418
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 478,616 + -0.7 478,616 + -1.1 478,616 + -0.2 478,616 + -0.3 478,620 + +2.0 478,621 - -0.5 478,621 - +0.8 478,657 + PfGW456L13_415 0.11 -1.5 478,657 + PfGW456L13_415 0.11 +0.0 478,657 + PfGW456L13_415 0.11 +0.6 478,658 - PfGW456L13_415 0.11 +2.6 478,658 - PfGW456L13_415 0.11 +1.3 478,658 - PfGW456L13_415 0.11 +0.4 478,658 - PfGW456L13_415 0.11 -0.8 478,661 + PfGW456L13_415 0.12 +1.6 478,662 - PfGW456L13_415 0.13 -0.6 478,662 - PfGW456L13_415 0.13 -0.3 478,662 - PfGW456L13_415 0.13 -1.7 478,662 - PfGW456L13_415 0.13 -1.4 478,662 - PfGW456L13_415 0.13 -1.2 478,846 + PfGW456L13_415 0.74 -0.6 478,846 + PfGW456L13_415 0.74 -0.2 478,846 + PfGW456L13_415 0.74 +0.1 478,847 - PfGW456L13_415 0.74 -0.6 478,921 + +0.2 478,953 + +0.3 478,953 + -1.5 478,953 + -1.8 478,954 - -0.4 478,979 - -0.1 479,004 - -0.7 479,127 + PfGW456L13_416 0.41 -0.6 479,133 - PfGW456L13_416 0.43 +0.7 479,166 - PfGW456L13_416 0.54 -0.6 479,251 + PfGW456L13_416 0.84 +0.5 479,252 - PfGW456L13_416 0.84 +1.6 479,252 - PfGW456L13_416 0.84 -0.4 479,252 - PfGW456L13_416 0.84 +1.9 479,252 - PfGW456L13_416 0.84 +0.6 479,252 - PfGW456L13_416 0.84 +2.0 479,253 + PfGW456L13_416 0.84 +0.3 479,296 + -2.1 479,297 - -1.3 479,297 - -1.2 479,337 + +1.9 479,338 - -1.3 479,338 - +1.6 479,338 - +0.3 479,374 + -1.4 479,374 + +0.3 479,374 + -1.1 479,375 - +0.8 479,375 - -0.1 479,375 - +1.0 479,387 + +0.4 479,387 + +0.9 479,387 + +0.5 479,387 + +0.5 479,387 + -0.2 479,387 + -1.6 479,387 + -0.5 479,388 - +0.3 479,388 - +0.9 479,440 - +0.5 479,465 - +0.2 479,515 - +1.6 479,515 - +0.0 479,515 - +0.8 479,524 + -1.8 479,524 + -1.4 479,524 + +0.6 479,525 - -0.2 479,525 - -1.0 479,616 + +1.5 479,616 + -0.3 479,616 + -1.1 479,617 - -0.1 479,617 - -1.4 479,617 - +0.3 479,726 + -0.7 479,727 - -3.3 479,756 + -0.9 479,756 + -0.8 479,757 - +0.7 479,757 - +1.3 479,757 - +0.3 479,757 - +0.1 479,757 - -0.3 479,795 + -0.8 479,795 + -1.0 479,796 - -0.1 479,806 + -1.8 479,817 - -1.3 479,817 - +0.5 479,817 - +0.7 479,817 - -0.9 479,856 + -1.0 479,856 + -0.2 479,857 - +0.3 479,886 + -0.8 479,886 + -0.1 479,886 + -1.1 479,887 - -1.6 479,887 - -0.1 479,887 - -1.5 479,891 - +0.3 479,938 + -1.1 479,991 + -0.5 480,162 - +1.8 480,248 - -0.4 480,306 - PfGW456L13_418 0.11 -0.8 480,332 + PfGW456L13_418 0.13 -2.3 480,391 + PfGW456L13_418 0.18 +0.7 480,401 - PfGW456L13_418 0.19 +0.5 480,447 + PfGW456L13_418 0.22 -0.5 480,707 + PfGW456L13_418 0.43 -0.1 480,708 - PfGW456L13_418 0.43 -3.4
Or see this region's nucleotide sequence