Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3003

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
3,344,378	+		PfGW456L13_3002	0.48	+0.4
3,344,378	+		PfGW456L13_3002	0.48	+0.6
3,344,564	+		PfGW456L13_3002	0.60	-1.0
3,344,565	-		PfGW456L13_3002	0.60	-1.0
3,344,565	-		PfGW456L13_3002	0.60	-0.2
3,344,565	-		PfGW456L13_3002	0.60	-0.5
3,344,648	+		PfGW456L13_3002	0.66	-0.5
3,344,648	+		PfGW456L13_3002	0.66	-2.0
3,344,648	+		PfGW456L13_3002	0.66	+0.1
3,344,648	+		PfGW456L13_3002	0.66	+1.3
3,344,648	+		PfGW456L13_3002	0.66	+0.1
3,344,648	+		PfGW456L13_3002	0.66	-0.7
3,344,648	+		PfGW456L13_3002	0.66	-1.1
3,344,649	-		PfGW456L13_3002	0.66	+0.3
3,344,649	-		PfGW456L13_3002	0.66	+1.0
3,344,649	-		PfGW456L13_3002	0.66	+0.0
3,344,649	-		PfGW456L13_3002	0.66	-0.4
3,344,703	-		PfGW456L13_3002	0.69	-0.5
3,344,816	+		PfGW456L13_3002	0.77	-2.4
3,344,816	+		PfGW456L13_3002	0.77	-0.4
3,344,817	-		PfGW456L13_3002	0.77	+0.3
3,344,921	+		PfGW456L13_3002	0.84	-1.0
3,344,922	-		PfGW456L13_3002	0.84	-0.0
3,344,922	-		PfGW456L13_3002	0.84	-0.5
3,344,972	+		PfGW456L13_3002	0.87	-2.4
3,344,972	+		PfGW456L13_3002	0.87	-1.1
3,344,972	+		PfGW456L13_3002	0.87	-0.3
3,344,973	-		PfGW456L13_3002	0.87	+1.0
3,344,973	-		PfGW456L13_3002	0.87	+0.7
3,344,973	-		PfGW456L13_3002	0.87	+1.0
3,344,973	-		PfGW456L13_3002	0.87	-1.9
3,345,089	+				-0.9
3,345,089	+				-0.0
3,345,090	-				-0.9
3,345,090	-				+1.3
3,345,090	-				-0.8
3,345,174	+				-0.3
3,345,174	+				+0.6
3,345,174	+				+0.6
3,345,174	+				+0.7
3,345,174	+				+0.5
3,345,175	-				+0.7
3,345,175	-				-2.2
3,345,175	-				-2.0
3,345,175	-				-0.6
3,345,175	-				+1.9
3,345,258	-				-0.1
3,345,264	+				+1.6
3,345,264	+				+0.2
3,345,271	+				-0.7
3,345,271	+				-1.6
3,345,271	+				+1.3
3,345,271	+				+1.6
3,345,271	+				-1.0
3,345,272	-				-1.1
3,345,272	-				+0.7
3,345,272	-				-1.7
3,345,272	-				+1.0
3,345,272	-				-0.6
3,345,272	-				-0.1
3,345,272	-				-0.4
3,345,272	-				+0.9
3,345,274	+				+1.3
3,345,274	+				-1.0
3,345,275	-				-0.1
3,345,275	-				-1.7
3,345,275	-				-0.4
3,345,275	-				-1.2
3,345,277	+				+0.7
3,345,277	+				+1.0
3,345,278	-				-1.5
3,345,278	-				+0.7
3,345,278	-				+0.7
3,345,351	+				+1.4
3,345,351	+				-0.5
3,345,352	-				+0.7
3,345,394	-				+0.3
3,345,600	+		PfGW456L13_3003	0.17	-0.1
3,345,600	+		PfGW456L13_3003	0.17	-0.9
3,345,600	+		PfGW456L13_3003	0.17	-1.6
3,345,600	+		PfGW456L13_3003	0.17	-0.1
3,345,601	-		PfGW456L13_3003	0.17	-0.7
3,345,601	-		PfGW456L13_3003	0.17	-0.9
3,345,601	-		PfGW456L13_3003	0.17	+2.3
3,345,601	-		PfGW456L13_3003	0.17	+0.1
3,345,601	-		PfGW456L13_3003	0.17	+0.1
3,345,601	-		PfGW456L13_3003	0.17	+0.3
3,345,601	-		PfGW456L13_3003	0.17	+1.0
3,345,601	-		PfGW456L13_3003	0.17	-0.8
3,345,601	-		PfGW456L13_3003	0.17	-0.4
3,345,601	-		PfGW456L13_3003	0.17	-0.0
3,345,987	+		PfGW456L13_3003	0.43	+0.7
3,345,988	-		PfGW456L13_3003	0.43	-0.5
3,346,357	-		PfGW456L13_3003	0.68	-2.0
3,346,497	+		PfGW456L13_3003	0.77	-0.9
3,346,497	+		PfGW456L13_3003	0.77	-0.9
3,346,497	+		PfGW456L13_3003	0.77	-1.4
3,346,497	+		PfGW456L13_3003	0.77	+0.3
3,346,498	-		PfGW456L13_3003	0.77	-0.4
3,346,498	-		PfGW456L13_3003	0.77	-0.0
3,346,521	+		PfGW456L13_3003	0.79	-1.3
3,346,521	+		PfGW456L13_3003	0.79	+0.7
3,346,521	+		PfGW456L13_3003	0.79	-0.6
3,346,521	+		PfGW456L13_3003	0.79	+0.2
3,346,521	+		PfGW456L13_3003	0.79	-0.4
3,346,521	+		PfGW456L13_3003	0.79	-0.3
3,346,522	-		PfGW456L13_3003	0.79	-0.0
3,346,522	-		PfGW456L13_3003	0.79	-0.4
3,346,522	-		PfGW456L13_3003	0.79	-0.2
3,346,522	-		PfGW456L13_3003	0.79	+1.0
3,346,522	-		PfGW456L13_3003	0.79	-2.0
3,346,522	-		PfGW456L13_3003	0.79	-1.5
3,346,522	-		PfGW456L13_3003	0.79	-1.2
3,346,522	-		PfGW456L13_3003	0.79	+0.3
3,346,522	-		PfGW456L13_3003	0.79	+0.0
3,346,584	+		PfGW456L13_3003	0.83	-0.5
3,346,584	+		PfGW456L13_3003	0.83	+1.0
3,346,585	-		PfGW456L13_3003	0.83	+1.0
3,346,782	+				-0.0
3,346,782	+				+2.3
3,346,782	+				+0.7
3,346,782	+				-0.1
3,346,782	+				-0.5
3,346,783	-				+2.3
3,346,783	-				+1.1
3,346,923	+				-0.0
3,346,953	+				-0.1
3,346,953	+				-0.8
3,346,953	+				-0.0
3,346,953	+				-0.9
3,346,953	+				-0.9
3,346,953	+				+1.0
3,346,953	+				+0.6
3,346,953	+				-2.5
3,346,953	+				+0.5
3,346,953	+				-0.5
3,346,954	-				+0.6
3,346,954	-				+0.6
3,346,954	-				+0.6
3,346,954	-				-1.2
3,346,971	+				-0.9
3,346,972	-				-0.0
3,346,972	-				-0.3
3,346,983	-				-1.1
3,346,983	-				-0.7
3,346,983	-				+0.1
3,346,983	-				-1.3
3,347,048	-				+1.7
3,347,053	+		PfGW456L13_3004	0.10	+0.8
3,347,053	+		PfGW456L13_3004	0.10	+0.0
3,347,053	+		PfGW456L13_3004	0.10	-0.2
3,347,054	-		PfGW456L13_3004	0.10	-1.1
3,347,054	-		PfGW456L13_3004	0.10	-1.0
3,347,054	-		PfGW456L13_3004	0.10	-0.7
3,347,054	-		PfGW456L13_3004	0.10	-0.2
3,347,054	-		PfGW456L13_3004	0.10	-1.4
3,347,054	-		PfGW456L13_3004	0.10	+0.6
3,347,056	-		PfGW456L13_3004	0.10	-0.6
3,347,177	+		PfGW456L13_3004	0.20	-2.6
3,347,177	+		PfGW456L13_3004	0.20	+0.6
3,347,178	-		PfGW456L13_3004	0.20	+0.9
3,347,178	-		PfGW456L13_3004	0.20	+0.8
3,347,178	-		PfGW456L13_3004	0.20	+0.1
3,347,178	-		PfGW456L13_3004	0.20	-0.0
3,347,208	+		PfGW456L13_3004	0.22	-0.2
3,347,279	-		PfGW456L13_3004	0.28	-1.2
3,347,279	-		PfGW456L13_3004	0.28	+0.7
3,347,440	-		PfGW456L13_3004	0.40	+0.2
3,347,507	+		PfGW456L13_3004	0.45	-2.1
3,347,507	+		PfGW456L13_3004	0.45	-0.0
3,347,508	-		PfGW456L13_3004	0.45	-0.6
3,347,530	+		PfGW456L13_3004	0.47	+0.1
3,347,530	+		PfGW456L13_3004	0.47	-1.8
3,347,531	-		PfGW456L13_3004	0.47	+0.1
3,347,609	+		PfGW456L13_3004	0.53	+0.3
3,347,609	+		PfGW456L13_3004	0.53	+0.6
3,347,609	+		PfGW456L13_3004	0.53	+0.0
3,347,609	+		PfGW456L13_3004	0.53	-0.4
3,347,609	+		PfGW456L13_3004	0.53	+0.5
3,347,609	+		PfGW456L13_3004	0.53	-0.9
3,347,610	-		PfGW456L13_3004	0.53	-0.0
3,347,610	-		PfGW456L13_3004	0.53	+0.0
3,347,610	-		PfGW456L13_3004	0.53	-0.5
3,347,610	-		PfGW456L13_3004	0.53	+0.8
3,347,640	+		PfGW456L13_3004	0.56	+0.3
3,347,640	+		PfGW456L13_3004	0.56	-0.4
3,347,640	+		PfGW456L13_3004	0.56	-0.1
3,347,641	-		PfGW456L13_3004	0.56	-0.3
3,347,641	-		PfGW456L13_3004	0.56	-0.0
3,347,681	+		PfGW456L13_3004	0.59	+0.8
3,347,681	+		PfGW456L13_3004	0.59	-0.8
3,347,682	-		PfGW456L13_3004	0.59	+1.2
3,347,682	-		PfGW456L13_3004	0.59	-0.1