Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2142 and PfGW456L13_2143 are separated by 80 nucleotides PfGW456L13_2143 and PfGW456L13_2144 are separated by 232 nucleotides PfGW456L13_2144 and PfGW456L13_2145 are separated by 41 nucleotides PfGW456L13_2145 and PfGW456L13_2146 are separated by 337 nucleotides
PfGW456L13_2142 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 2,344,276 to 2,345,715
_2142
PfGW456L13_2143 - Translation initiation factor 2 (IF-2; GTPase), at 2,345,796 to 2,346,275
_2143
PfGW456L13_2144 - proteinase inhibitor, at 2,346,508 to 2,346,696
_2144
PfGW456L13_2145 - Collagenase and related proteases, at 2,346,738 to 2,347,343
_2145
PfGW456L13_2146 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 2,347,681 to 2,349,774
_2146
Position (kb)
2346
2347 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2345.714 kb on - strand at 2345.714 kb on - strand at 2345.760 kb on + strand at 2345.760 kb on + strand at 2345.760 kb on + strand at 2345.760 kb on + strand at 2345.760 kb on + strand at 2345.760 kb on + strand at 2345.761 kb on - strand at 2345.761 kb on - strand at 2345.761 kb on - strand at 2345.761 kb on - strand at 2345.761 kb on - strand at 2345.793 kb on + strand at 2345.793 kb on + strand at 2345.793 kb on + strand at 2345.793 kb on + strand at 2345.793 kb on + strand at 2345.794 kb on - strand at 2345.794 kb on - strand at 2345.794 kb on - strand at 2345.847 kb on - strand, within PfGW456L13_2143 at 2345.891 kb on + strand, within PfGW456L13_2143 at 2345.954 kb on + strand, within PfGW456L13_2143 at 2346.041 kb on + strand, within PfGW456L13_2143 at 2346.041 kb on + strand, within PfGW456L13_2143 at 2346.041 kb on + strand, within PfGW456L13_2143 at 2346.042 kb on - strand, within PfGW456L13_2143 at 2346.273 kb on + strand at 2346.364 kb on + strand at 2346.369 kb on + strand at 2346.384 kb on - strand at 2346.390 kb on + strand at 2346.391 kb on - strand at 2346.507 kb on + strand at 2346.507 kb on + strand at 2346.508 kb on - strand at 2346.571 kb on - strand, within PfGW456L13_2144 at 2346.704 kb on + strand at 2346.704 kb on + strand at 2346.705 kb on - strand at 2346.705 kb on - strand at 2346.724 kb on + strand at 2346.724 kb on + strand at 2346.731 kb on + strand at 2346.731 kb on + strand at 2346.732 kb on - strand at 2346.732 kb on - strand at 2346.737 kb on + strand at 2346.737 kb on + strand at 2346.737 kb on + strand at 2346.738 kb on - strand at 2346.755 kb on + strand at 2346.755 kb on + strand at 2346.755 kb on + strand at 2346.755 kb on + strand at 2346.755 kb on + strand at 2346.756 kb on - strand at 2346.756 kb on - strand at 2346.756 kb on - strand at 2346.756 kb on - strand at 2346.756 kb on - strand at 2346.879 kb on + strand, within PfGW456L13_2145 at 2346.879 kb on + strand, within PfGW456L13_2145 at 2346.879 kb on + strand, within PfGW456L13_2145 at 2346.879 kb on + strand, within PfGW456L13_2145 at 2346.880 kb on - strand at 2346.880 kb on - strand, within PfGW456L13_2145 at 2346.889 kb on - strand, within PfGW456L13_2145 at 2346.889 kb on - strand, within PfGW456L13_2145 at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.026 kb on + strand at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.026 kb on + strand, within PfGW456L13_2145 at 2347.027 kb on - strand, within PfGW456L13_2145 at 2347.027 kb on - strand, within PfGW456L13_2145 at 2347.027 kb on - strand, within PfGW456L13_2145 at 2347.027 kb on - strand, within PfGW456L13_2145 at 2347.027 kb on - strand, within PfGW456L13_2145 at 2347.027 kb on - strand, within PfGW456L13_2145 at 2347.140 kb on + strand, within PfGW456L13_2145 at 2347.140 kb on + strand, within PfGW456L13_2145 at 2347.141 kb on - strand, within PfGW456L13_2145 at 2347.201 kb on + strand, within PfGW456L13_2145 at 2347.230 kb on + strand, within PfGW456L13_2145 at 2347.230 kb on + strand, within PfGW456L13_2145 at 2347.230 kb on + strand, within PfGW456L13_2145 at 2347.231 kb on - strand, within PfGW456L13_2145 at 2347.231 kb on - strand, within PfGW456L13_2145 at 2347.231 kb on - strand, within PfGW456L13_2145 at 2347.307 kb on + strand at 2347.307 kb on + strand at 2347.308 kb on - strand at 2347.341 kb on + strand at 2347.341 kb on + strand at 2347.341 kb on + strand at 2347.341 kb on + strand at 2347.341 kb on + strand at 2347.341 kb on + strand at 2347.342 kb on - strand at 2347.342 kb on - strand at 2347.342 kb on - strand at 2347.342 kb on - strand at 2347.342 kb on - strand at 2347.423 kb on + strand at 2347.424 kb on - strand at 2347.438 kb on + strand at 2347.505 kb on + strand at 2347.506 kb on - strand at 2347.506 kb on - strand at 2347.542 kb on + strand at 2347.542 kb on + strand at 2347.543 kb on - strand at 2347.546 kb on + strand at 2347.546 kb on + strand at 2347.546 kb on + strand at 2347.546 kb on + strand at 2347.546 kb on + strand at 2347.547 kb on - strand at 2347.547 kb on - strand at 2347.547 kb on - strand at 2347.547 kb on - strand at 2347.610 kb on + strand at 2347.641 kb on + strand at 2347.641 kb on + strand at 2347.642 kb on - strand at 2347.642 kb on - strand at 2347.642 kb on - strand at 2347.672 kb on + strand at 2347.672 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,345,714 - -1.8 2,345,714 - +0.3 2,345,760 + -2.5 2,345,760 + +1.3 2,345,760 + +1.0 2,345,760 + +0.5 2,345,760 + -0.9 2,345,760 + -0.1 2,345,761 - -0.7 2,345,761 - -0.3 2,345,761 - -0.2 2,345,761 - +1.8 2,345,761 - -1.1 2,345,793 + +2.3 2,345,793 + -2.8 2,345,793 + +0.3 2,345,793 + -1.6 2,345,793 + -0.1 2,345,794 - -0.7 2,345,794 - -0.2 2,345,794 - -0.9 2,345,847 - PfGW456L13_2143 0.11 -0.6 2,345,891 + PfGW456L13_2143 0.20 -1.5 2,345,954 + PfGW456L13_2143 0.33 +1.2 2,346,041 + PfGW456L13_2143 0.51 -0.1 2,346,041 + PfGW456L13_2143 0.51 -0.5 2,346,041 + PfGW456L13_2143 0.51 +0.3 2,346,042 - PfGW456L13_2143 0.51 +0.2 2,346,273 + -0.5 2,346,364 + +0.4 2,346,369 + -0.6 2,346,384 - +1.0 2,346,390 + +0.1 2,346,391 - +0.3 2,346,507 + +0.6 2,346,507 + -0.4 2,346,508 - +1.1 2,346,571 - PfGW456L13_2144 0.33 +1.5 2,346,704 + -0.8 2,346,704 + -1.4 2,346,705 - -0.0 2,346,705 - -1.3 2,346,724 + +1.2 2,346,724 + +0.7 2,346,731 + +1.1 2,346,731 + -0.1 2,346,732 - +0.8 2,346,732 - -0.6 2,346,737 + +0.1 2,346,737 + -0.3 2,346,737 + +0.5 2,346,738 - +1.0 2,346,755 + -0.0 2,346,755 + -1.2 2,346,755 + -0.1 2,346,755 + +0.1 2,346,755 + +1.7 2,346,756 - +1.1 2,346,756 - -1.8 2,346,756 - -0.2 2,346,756 - -1.2 2,346,756 - -0.5 2,346,879 + PfGW456L13_2145 0.23 +1.1 2,346,879 + PfGW456L13_2145 0.23 +1.2 2,346,879 + PfGW456L13_2145 0.23 -1.1 2,346,879 + PfGW456L13_2145 0.23 -0.1 2,346,880 - +2.3 2,346,880 - PfGW456L13_2145 0.23 -1.2 2,346,889 - PfGW456L13_2145 0.25 +0.0 2,346,889 - PfGW456L13_2145 0.25 -0.1 2,347,026 + PfGW456L13_2145 0.48 +0.6 2,347,026 + +0.0 2,347,026 + PfGW456L13_2145 0.48 -0.8 2,347,026 + PfGW456L13_2145 0.48 +0.3 2,347,026 + PfGW456L13_2145 0.48 -0.5 2,347,026 + PfGW456L13_2145 0.48 +1.7 2,347,026 + PfGW456L13_2145 0.48 +1.9 2,347,026 + PfGW456L13_2145 0.48 +0.1 2,347,027 - PfGW456L13_2145 0.48 -0.4 2,347,027 - PfGW456L13_2145 0.48 +1.2 2,347,027 - PfGW456L13_2145 0.48 +0.3 2,347,027 - PfGW456L13_2145 0.48 -1.8 2,347,027 - PfGW456L13_2145 0.48 +0.0 2,347,027 - PfGW456L13_2145 0.48 -0.7 2,347,140 + PfGW456L13_2145 0.66 -0.5 2,347,140 + PfGW456L13_2145 0.66 -0.9 2,347,141 - PfGW456L13_2145 0.67 -0.4 2,347,201 + PfGW456L13_2145 0.76 -0.1 2,347,230 + PfGW456L13_2145 0.81 +0.6 2,347,230 + PfGW456L13_2145 0.81 +0.4 2,347,230 + PfGW456L13_2145 0.81 -0.5 2,347,231 - PfGW456L13_2145 0.81 +2.2 2,347,231 - PfGW456L13_2145 0.81 -0.5 2,347,231 - PfGW456L13_2145 0.81 +0.6 2,347,307 + -0.0 2,347,307 + +0.8 2,347,308 - +1.2 2,347,341 + +0.1 2,347,341 + -1.4 2,347,341 + +0.5 2,347,341 + -0.1 2,347,341 + -1.1 2,347,341 + -0.6 2,347,342 - -0.4 2,347,342 - -0.7 2,347,342 - -0.1 2,347,342 - +1.1 2,347,342 - -1.4 2,347,423 + -0.8 2,347,424 - +0.2 2,347,438 + -0.2 2,347,505 + +0.6 2,347,506 - +0.3 2,347,506 - -1.8 2,347,542 + -0.4 2,347,542 + -0.1 2,347,543 - -1.3 2,347,546 + -0.8 2,347,546 + -2.1 2,347,546 + -0.9 2,347,546 + +1.3 2,347,546 + -1.8 2,347,547 - -0.9 2,347,547 - -0.2 2,347,547 - +1.7 2,347,547 - +0.2 2,347,610 + -0.2 2,347,641 + -0.1 2,347,641 + +0.2 2,347,642 - +0.2 2,347,642 - -0.1 2,347,642 - -1.4 2,347,672 + +0.9 2,347,672 + +0.8
Or see this region's nucleotide sequence