Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4579

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,484,927	+				-0.3
5,484,927	+				-1.5
5,484,928	-				-0.5
5,484,928	-				-0.2
5,484,928	-				-0.3
5,484,930	-				-1.5
5,484,940	+				+0.5
5,484,940	+				-1.9
5,484,941	-				+0.1
5,484,941	-				+1.8
5,484,974	-				+0.9
5,485,031	-				-0.9
5,485,047	-				-0.1
5,485,060	-				-1.1
5,485,063	+				-0.0
5,485,063	+				-0.7
5,485,064	-				-0.4
5,485,064	-				+0.7
5,485,065	+				-0.2
5,485,065	+				+0.5
5,485,066	-				+0.2
5,485,066	-				-1.1
5,485,066	-				-0.4
5,485,066	-				+0.7
5,485,068	-				-0.0
5,485,113	-				-0.0
5,485,152	+				+0.5
5,485,158	+				+1.2
5,485,158	+				-1.6
5,485,162	+				+1.0
5,485,164	+				-0.2
5,485,164	+				-0.9
5,485,164	+				+0.5
5,485,170	+				+0.4
5,485,170	+				+0.7
5,485,170	+				+1.7
5,485,170	+				-0.3
5,485,181	+				+0.6
5,485,181	+				-0.5
5,485,231	-				-0.6
5,485,330	-				+0.1
5,485,330	-				-0.6
5,485,397	+		Echvi_4578	0.18	-0.5
5,485,428	+		Echvi_4578	0.23	-0.9
5,485,428	+		Echvi_4578	0.23	-0.9
5,485,429	-		Echvi_4578	0.24	-1.6
5,485,450	+		Echvi_4578	0.27	+1.7
5,485,451	-		Echvi_4578	0.27	+0.8
5,485,489	+				+0.7
5,485,490	-		Echvi_4578	0.34	-2.4
5,485,494	-		Echvi_4578	0.35	-0.3
5,485,494	-		Echvi_4578	0.35	+0.8
5,485,494	-		Echvi_4578	0.35	-0.7
5,485,515	-		Echvi_4578	0.38	-0.5
5,485,585	-		Echvi_4578	0.50	+0.8
5,485,585	-		Echvi_4578	0.50	-1.3
5,485,639	+		Echvi_4578	0.59	-2.4
5,485,653	+		Echvi_4578	0.61	-0.7
5,485,736	+		Echvi_4578	0.75	+0.4
5,485,758	+		Echvi_4578	0.79	-0.5
5,485,758	+		Echvi_4578	0.79	-1.2
5,485,758	+		Echvi_4578	0.79	-2.2
5,485,759	-		Echvi_4578	0.79	-0.3
5,485,759	-		Echvi_4578	0.79	+0.8
5,485,760	+		Echvi_4578	0.80	-0.5
5,485,761	-		Echvi_4578	0.80	-0.7
5,485,761	-		Echvi_4578	0.80	-1.3
5,485,798	+		Echvi_4578	0.86	-1.7
5,485,864	-				-0.7
5,485,886	-				-3.4
5,485,928	+				+0.7
5,485,944	+		Echvi_4579	0.35	+0.5
5,485,955	-		Echvi_4579	0.41	-1.4
5,485,992	+		Echvi_4579	0.61	-0.8
5,485,993	-		Echvi_4579	0.62	+0.7
5,485,997	-		Echvi_4579	0.64	-0.4
5,486,029	-		Echvi_4579	0.81	-1.6
5,486,029	-		Echvi_4579	0.81	-1.7
5,486,061	-				-1.8
5,486,067	-				+0.3
5,486,078	+				-0.2
5,486,100	-				+1.2
5,486,122	+				+0.0
5,486,122	+				-2.2
5,486,122	+				+2.7
5,486,123	-				+0.2
5,486,123	-				+1.1
5,486,127	-				-3.1
5,486,175	-		Echvi_4580	0.12	+0.6
5,486,254	+		Echvi_4580	0.21	+1.0
5,486,295	-		Echvi_4580	0.26	-1.5
5,486,325	-		Echvi_4580	0.30	-0.2
5,486,328	-		Echvi_4580	0.30	+0.0
5,486,367	-		Echvi_4580	0.35	+0.7
5,486,402	-		Echvi_4580	0.39	+0.7
5,486,402	-		Echvi_4580	0.39	+1.0
5,486,432	+		Echvi_4580	0.43	-0.7
5,486,432	+		Echvi_4580	0.43	+0.2
5,486,432	+		Echvi_4580	0.43	+0.1
5,486,478	+		Echvi_4580	0.48	-1.1
5,486,478	+		Echvi_4580	0.48	+0.2
5,486,478	+		Echvi_4580	0.48	+0.1
5,486,478	+		Echvi_4580	0.48	-1.0
5,486,479	-		Echvi_4580	0.48	+3.3
5,486,558	+		Echvi_4580	0.58	-0.6
5,486,559	-		Echvi_4580	0.58	-0.6
5,486,568	+		Echvi_4580	0.59	+0.6
5,486,569	-		Echvi_4580	0.59	-0.6
5,486,569	-		Echvi_4580	0.59	+0.3
5,486,571	-		Echvi_4580	0.59	-1.1
5,486,703	-		Echvi_4580	0.75	+0.4
5,486,813	+		Echvi_4580	0.89	-0.8
5,486,923	+				+0.1
5,486,955	-				+1.1
5,486,996	+				+0.7
5,486,996	+				-1.5
5,486,996	+				+0.5
5,486,996	+				+0.7
5,486,997	-				-0.5
5,487,007	+				-1.0
5,487,007	+				+0.7
5,487,016	+				-0.0