Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4466

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,340,018	-				+1.6
5,340,018	-				+0.7
5,340,089	+		Echvi_4464	0.16	-0.2
5,340,090	-		Echvi_4464	0.16	-0.2
5,340,111	-		Echvi_4464	0.24	-1.7
5,340,111	-		Echvi_4464	0.24	+0.8
5,340,158	+		Echvi_4464	0.43	+0.3
5,340,159	-		Echvi_4464	0.44	+1.7
5,340,159	-		Echvi_4464	0.44	+2.3
5,340,219	+		Echvi_4464	0.68	-0.2
5,340,219	+		Echvi_4464	0.68	-2.0
5,340,252	+		Echvi_4464	0.81	+0.0
5,340,253	-		Echvi_4464	0.82	+0.9
5,340,256	+		Echvi_4464	0.83	+0.8
5,340,257	-		Echvi_4464	0.83	+0.0
5,340,270	+		Echvi_4464	0.88	-1.4
5,340,271	-		Echvi_4464	0.89	+0.7
5,340,271	-		Echvi_4464	0.89	+0.2
5,340,271	-		Echvi_4464	0.89	+0.5
5,340,276	+				+0.1
5,340,276	+				+1.7
5,340,311	+				-0.2
5,340,323	+				+0.8
5,340,333	+				+0.1
5,340,355	+				-0.3
5,340,355	+				-0.4
5,340,355	+				+0.6
5,340,355	+				+1.3
5,340,356	-				-0.2
5,340,356	-				+0.8
5,340,356	-				-0.5
5,340,356	-				+1.7
5,340,368	-				-1.5
5,340,538	+				+0.0
5,340,601	+		Echvi_4465	0.15	+5.2
5,340,636	+		Echvi_4465	0.25	-1.3
5,340,637	-		Echvi_4465	0.25	-0.1
5,340,725	+		Echvi_4465	0.49	-0.4
5,340,726	-		Echvi_4465	0.49	-0.6
5,340,726	-		Echvi_4465	0.49	-0.0
5,340,726	-		Echvi_4465	0.49	+2.7
5,340,727	+		Echvi_4465	0.50	-0.3
5,340,728	-		Echvi_4465	0.50	+0.0
5,340,771	-		Echvi_4465	0.62	+0.2
5,340,771	-		Echvi_4465	0.62	+0.7
5,340,850	-		Echvi_4465	0.83	+0.3
5,340,915	+				-1.2
5,340,922	+				+0.0
5,340,943	+				-0.0
5,340,943	+				-0.2
5,340,947	+				-0.9
5,340,948	-				+1.0
5,340,950	+				-2.2
5,340,950	+				-0.2
5,340,950	+				-0.1
5,340,950	+				-0.5
5,340,950	+				+1.7
5,340,952	+				+0.7
5,340,952	+				+0.4
5,340,989	-				-1.6
5,340,995	-				-0.7
5,341,068	-		Echvi_4466	0.13	-1.1
5,341,068	-		Echvi_4466	0.13	-2.4
5,341,102	+		Echvi_4466	0.17	-1.3
5,341,102	+		Echvi_4466	0.17	+0.7
5,341,106	-		Echvi_4466	0.17	-1.4
5,341,106	-		Echvi_4466	0.17	-1.1
5,341,270	+		Echvi_4466	0.38	-0.9
5,341,271	-		Echvi_4466	0.38	-1.6
5,341,388	-		Echvi_4466	0.53	-0.3
5,341,404	+		Echvi_4466	0.55	+0.5
5,341,405	-		Echvi_4466	0.55	-0.9
5,341,431	+		Echvi_4466	0.58	-0.5
5,341,462	+		Echvi_4466	0.62	+0.2
5,341,462	+		Echvi_4466	0.62	-0.0
5,341,521	+		Echvi_4466	0.69	+0.1
5,341,530	+		Echvi_4466	0.71	+0.0
5,341,531	-		Echvi_4466	0.71	-0.4
5,341,531	-		Echvi_4466	0.71	-0.5
5,341,533	+		Echvi_4466	0.71	-0.6
5,341,533	+		Echvi_4466	0.71	-0.5
5,341,534	-		Echvi_4466	0.71	+1.1
5,341,540	+		Echvi_4466	0.72	-0.5
5,341,541	-		Echvi_4466	0.72	-1.9
5,341,541	-		Echvi_4466	0.72	-1.5
5,341,594	+		Echvi_4466	0.79	-1.4
5,341,597	-		Echvi_4466	0.79	-0.3
5,341,631	+		Echvi_4466	0.83	+0.3
5,341,631	+		Echvi_4466	0.83	+0.7
5,341,631	+		Echvi_4466	0.83	-0.2
5,341,631	+		Echvi_4466	0.83	-0.6
5,341,651	-		Echvi_4466	0.86	-1.3
5,341,651	-		Echvi_4466	0.86	-2.5
5,341,683	+		Echvi_4466	0.90	-1.0
5,341,767	+				+0.6
5,341,768	-				+1.3
5,341,803	-				-1.1
5,341,819	-				-0.7
5,341,880	+		Echvi_4467	0.17	-0.4
5,341,881	-		Echvi_4467	0.17	+0.1
5,341,898	+		Echvi_4467	0.21	-1.1
5,341,898	+		Echvi_4467	0.21	+0.8
5,341,898	+		Echvi_4467	0.21	+0.9
5,341,899	-		Echvi_4467	0.22	-0.8
5,341,924	-		Echvi_4467	0.28	-1.1
5,341,924	-		Echvi_4467	0.28	-2.3
5,341,956	+		Echvi_4467	0.36	-0.4
5,341,956	+		Echvi_4467	0.36	+2.2
5,341,956	+		Echvi_4467	0.36	+0.3
5,341,956	+		Echvi_4467	0.36	+0.3
5,341,957	-		Echvi_4467	0.37	-1.1
5,341,986	-		Echvi_4467	0.44	-2.5
5,342,024	+		Echvi_4467	0.54	+0.4
5,342,024	+		Echvi_4467	0.54	+0.5
5,342,024	+		Echvi_4467	0.54	-1.2
5,342,024	+		Echvi_4467	0.54	+0.1
5,342,089	-		Echvi_4467	0.71	-1.4
5,342,102	+		Echvi_4467	0.74	+0.8
5,342,168	+				+0.1
5,342,169	-				-1.8
5,342,194	+				+0.8
5,342,194	+				-0.2
5,342,194	+				-2.6
5,342,195	-				-1.5
5,342,195	-				-1.8
5,342,235	+				+0.4
5,342,238	-				-3.8
5,342,238	-				-2.0
5,342,266	+				+0.2
5,342,267	-				-1.9
5,342,272	+				+0.4
5,342,314	+				-1.7
5,342,314	+				-0.9
5,342,314	+				+0.2
5,342,347	+				-1.3
5,342,373	+				-0.8
5,342,374	-				-2.1
5,342,376	+				+0.2
5,342,376	+				+0.9
5,342,377	-				-2.2
5,342,380	-				-3.7
5,342,388	-				+0.2
5,342,406	+				-0.8
5,342,418	+				+0.1
5,342,430	-				-1.3
5,342,456	+				-0.4
5,342,475	+				+0.5
5,342,499	-				-0.8
5,342,504	+				+1.5
5,342,624	+		Echvi_4468	0.11	+0.8
5,342,624	+		Echvi_4468	0.11	+0.0
5,342,627	+		Echvi_4468	0.12	+0.0
5,342,652	+		Echvi_4468	0.13	+0.7
5,342,652	+		Echvi_4468	0.13	-0.0