Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4435

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,304,475	+		Echvi_4434	0.64	-0.4
5,304,475	+		Echvi_4434	0.64	-0.3
5,304,475	+		Echvi_4434	0.64	-0.1
5,304,475	+		Echvi_4434	0.64	-0.3
5,304,487	-		Echvi_4434	0.66	-0.7
5,304,553	+		Echvi_4434	0.81	+0.2
5,304,554	-		Echvi_4434	0.81	-0.1
5,304,555	+		Echvi_4434	0.81	+0.6
5,304,603	-				-0.3
5,304,665	-				-1.4
5,304,689	+				-1.7
5,304,712	+				-0.7
5,304,712	+				+0.7
5,304,712	+				+2.7
5,304,713	-				-2.3
5,304,714	+				-1.8
5,304,714	+				-0.3
5,304,772	+				-0.3
5,304,773	-				+2.5
5,304,814	+				-0.9
5,304,833	-				+2.5
5,304,846	-				-0.1
5,304,862	-				-1.4
5,304,888	+				-1.3
5,304,888	+				-1.3
5,304,966	+				+0.3
5,304,966	+				+2.7
5,304,967	-				-1.6
5,304,994	-				-1.2
5,305,096	-				-2.2
5,305,173	+				-0.1
5,305,174	-				-1.4
5,305,178	+				+0.6
5,305,198	+				+0.6
5,305,198	+				-2.6
5,305,198	+				-2.0
5,305,199	-				+0.1
5,305,199	-				-1.2
5,305,245	+				+0.9
5,305,267	+				-0.1
5,305,268	-				-0.5
5,305,290	-				-2.7
5,305,308	+				+0.5
5,305,308	+				+2.1
5,305,308	+				+0.2
5,305,308	+				-2.0
5,305,312	+				+0.3
5,305,313	-				-2.2
5,305,313	-				-0.4
5,305,313	-				-0.7
5,305,316	-				-0.9
5,305,325	-				-0.3
5,305,327	-				+1.7
5,305,327	-				+0.9
5,305,330	+				-2.8
5,305,353	-				-0.5
5,305,389	-				-0.3
5,305,391	-				-1.0
5,305,405	+				+0.5
5,305,417	+				+0.6
5,305,417	+				-0.3
5,305,417	+				+0.9
5,305,418	-				+0.3
5,305,418	-				-3.2
5,305,418	-				-0.4
5,305,418	-				+0.0
5,305,427	+				+0.7
5,305,428	-				-1.2
5,305,436	+				+0.2
5,305,452	-				+0.3
5,305,470	+				-0.2
5,305,470	+				+0.0
5,305,470	+				-0.3
5,305,470	+				+0.8
5,305,538	+		Echvi_4435	0.16	+1.7
5,305,538	+		Echvi_4435	0.16	-1.1
5,305,538	+		Echvi_4435	0.16	-0.5
5,305,538	+		Echvi_4435	0.16	+1.0
5,305,539	-		Echvi_4435	0.17	-2.1
5,305,547	+		Echvi_4435	0.19	-0.1
5,305,558	-		Echvi_4435	0.21	+0.9
5,305,558	-		Echvi_4435	0.21	-0.8
5,305,570	-		Echvi_4435	0.24	+1.4
5,305,577	+		Echvi_4435	0.26	-0.4
5,305,586	+		Echvi_4435	0.28	+0.6
5,305,587	-		Echvi_4435	0.28	+1.2
5,305,588	+		Echvi_4435	0.28	+0.7
5,305,588	+		Echvi_4435	0.28	-0.4
5,305,588	+		Echvi_4435	0.28	+0.5
5,305,588	+		Echvi_4435	0.28	-0.2
5,305,591	+		Echvi_4435	0.29	-1.8
5,305,592	-		Echvi_4435	0.29	-0.4
5,305,594	+		Echvi_4435	0.30	-1.7
5,305,608	-		Echvi_4435	0.33	+0.5
5,305,610	+		Echvi_4435	0.34	-0.6
5,305,619	+		Echvi_4435	0.36	+0.4
5,305,631	+		Echvi_4435	0.39	+0.6
5,305,639	+		Echvi_4435	0.40	+0.1
5,305,644	-		Echvi_4435	0.42	-0.2
5,305,644	-		Echvi_4435	0.42	+0.5
5,305,647	+		Echvi_4435	0.42	-0.7
5,305,652	+		Echvi_4435	0.44	-0.3
5,305,652	+		Echvi_4435	0.44	-1.3
5,305,652	+		Echvi_4435	0.44	+0.5
5,305,652	+		Echvi_4435	0.44	-1.0
5,305,653	-		Echvi_4435	0.44	-1.3
5,305,653	-		Echvi_4435	0.44	+0.5
5,305,686	+		Echvi_4435	0.52	+0.6
5,305,686	+		Echvi_4435	0.52	+0.3
5,305,686	+		Echvi_4435	0.52	+1.1
5,305,686	+		Echvi_4435	0.52	+0.4
5,305,690	+		Echvi_4435	0.53	+0.5
5,305,705	+		Echvi_4435	0.56	-2.0
5,305,706	-		Echvi_4435	0.56	+1.3
5,305,729	+		Echvi_4435	0.62	+0.2
5,305,729	+		Echvi_4435	0.62	+1.1
5,305,729	+		Echvi_4435	0.62	+3.0
5,305,745	+		Echvi_4435	0.66	+1.1
5,305,749	-		Echvi_4435	0.67	-2.5
5,305,783	+		Echvi_4435	0.75	+0.4
5,305,783	+		Echvi_4435	0.75	-2.3
5,305,786	+		Echvi_4435	0.75	+1.2
5,305,794	+		Echvi_4435	0.77	+1.0
5,305,803	+		Echvi_4435	0.80	+0.2
5,305,805	+		Echvi_4435	0.80	+0.3
5,305,805	+		Echvi_4435	0.80	+0.0
5,305,806	-		Echvi_4435	0.80	-0.1
5,305,817	+		Echvi_4435	0.83	+1.3
5,305,817	+		Echvi_4435	0.83	-1.3
5,305,818	-		Echvi_4435	0.83	+1.9
5,305,832	+		Echvi_4435	0.86	-0.0
5,305,841	-		Echvi_4435	0.89	+0.0
5,305,867	+				-0.5
5,305,868	-				-0.1
5,305,871	-				-0.1
5,305,871	-				-0.2
5,305,871	-				-1.1
5,305,871	-				-0.3
5,305,914	-				-0.2
5,305,914	-				-1.0
5,305,944	+				-1.6
5,305,967	+				-0.8
5,306,021	+				-0.1
5,306,022	-				+1.3
5,306,043	+				+0.1
5,306,044	-				+1.2
5,306,053	+				-0.5
5,306,054	-				+1.7
5,306,054	-				+1.0
5,306,054	-				-0.1
5,306,057	+				+0.3
5,306,071	-				-1.4
5,306,137	+				+0.0
5,306,166	+				+1.1
5,306,172	+				-0.1
5,306,172	+				+2.0
5,306,172	+				+0.2
5,306,174	+				+2.3
5,306,174	+				-0.8
5,306,174	+				-0.3
5,306,175	-				-0.4
5,306,175	-				-0.6
5,306,185	-				-1.0
5,306,285	-				-0.4
5,306,325	+		Echvi_4436	0.11	-0.8
5,306,335	+		Echvi_4436	0.11	-2.5
5,306,356	+		Echvi_4436	0.12	+0.6
5,306,356	+		Echvi_4436	0.12	-0.6
5,306,364	+		Echvi_4436	0.12	-0.8
5,306,365	-		Echvi_4436	0.12	-0.5
5,306,365	-		Echvi_4436	0.12	-1.6
5,306,383	+		Echvi_4436	0.13	+0.3
5,306,383	+		Echvi_4436	0.13	+0.8
5,306,383	+		Echvi_4436	0.13	+0.6
5,306,384	-		Echvi_4436	0.13	-2.1
5,306,384	-		Echvi_4436	0.13	-1.0
5,306,388	+		Echvi_4436	0.13	+2.3
5,306,389	-		Echvi_4436	0.13	-0.7
5,306,448	+		Echvi_4436	0.15	-1.7
5,306,448	+		Echvi_4436	0.15	+0.4
5,306,449	-		Echvi_4436	0.15	-0.6
5,306,454	+		Echvi_4436	0.15	+0.5
5,306,454	+		Echvi_4436	0.15	-0.4
5,306,454	+		Echvi_4436	0.15	-0.3
5,306,454	+		Echvi_4436	0.15	-0.7
5,306,455	-		Echvi_4436	0.15	-0.5
5,306,456	+		Echvi_4436	0.15	+1.1
5,306,456	+		Echvi_4436	0.15	-1.3
5,306,457	-		Echvi_4436	0.15	+0.9
5,306,467	+		Echvi_4436	0.16	+0.9
5,306,468	-		Echvi_4436	0.16	-0.8
5,306,468	-		Echvi_4436	0.16	-0.0
5,306,491	+		Echvi_4436	0.16	+0.9
5,306,516	-		Echvi_4436	0.17	-2.3
5,306,521	+		Echvi_4436	0.17	+1.3
5,306,521	+		Echvi_4436	0.17	-0.2
5,306,521	+		Echvi_4436	0.17	-0.5
5,306,553	+		Echvi_4436	0.19	+1.0
5,306,558	+		Echvi_4436	0.19	+0.4
5,306,570	+		Echvi_4436	0.19	+0.5
5,306,580	+		Echvi_4436	0.19	+1.1
5,306,581	-		Echvi_4436	0.19	+0.7
5,306,583	-		Echvi_4436	0.20	-2.8
5,306,608	-		Echvi_4436	0.20	+1.4
5,306,652	+		Echvi_4436	0.22	+1.3
5,306,652	+		Echvi_4436	0.22	+0.0
5,306,652	+		Echvi_4436	0.22	-0.6
5,306,652	+		Echvi_4436	0.22	-0.5
5,306,653	-		Echvi_4436	0.22	-0.8
5,306,673	+		Echvi_4436	0.23	+0.8
5,306,686	-		Echvi_4436	0.23	-0.6
5,306,727	+		Echvi_4436	0.25	-0.2
5,306,728	-		Echvi_4436	0.25	+0.7
5,306,728	-		Echvi_4436	0.25	-2.4
5,306,728	-		Echvi_4436	0.25	+0.2
5,306,736	+		Echvi_4436	0.25	+1.0
5,306,754	+		Echvi_4436	0.26	-0.1
5,306,754	+		Echvi_4436	0.26	-0.6
5,306,786	+		Echvi_4436	0.27	+1.6
5,306,786	+		Echvi_4436	0.27	-0.2
5,306,786	+		Echvi_4436	0.27	+0.2
5,306,786	+		Echvi_4436	0.27	+0.3
5,306,787	-		Echvi_4436	0.27	-1.6
5,306,787	-		Echvi_4436	0.27	-0.8
5,306,787	-		Echvi_4436	0.27	+1.3
5,306,787	-		Echvi_4436	0.27	+2.8