Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4416

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,279,434	+		Echvi_4414	0.16	-1.8
5,279,552	-				-2.8
5,279,706	+				+0.4
5,279,736	+				+0.1
5,279,737	-				-1.2
5,279,737	-				-0.9
5,279,739	-				-0.8
5,279,739	-				-1.7
5,279,795	-				-1.1
5,279,803	+				+1.0
5,279,803	+				+1.3
5,279,803	+				-1.9
5,279,803	+				-0.1
5,279,804	-				-0.4
5,279,804	-				-0.2
5,279,804	-				+0.7
5,279,866	+		Echvi_4415	0.18	-1.8
5,279,888	+		Echvi_4415	0.23	-0.4
5,279,941	+		Echvi_4415	0.33	-0.0
5,279,943	+		Echvi_4415	0.34	-0.3
5,280,112	-		Echvi_4415	0.67	+0.3
5,280,112	-		Echvi_4415	0.67	-1.6
5,280,152	+		Echvi_4415	0.75	+0.0
5,280,201	+		Echvi_4415	0.85	-1.1
5,280,243	+				-2.6
5,280,307	-				-0.3
5,280,309	-				+0.6
5,280,309	-				+0.4
5,280,309	-				+0.1
5,280,352	+				-0.1
5,280,355	+				+0.4
5,280,355	+				+1.3
5,280,355	+				-0.6
5,280,529	+		Echvi_4416	0.51	-0.5
5,280,529	+		Echvi_4416	0.51	+1.4
5,280,548	+		Echvi_4416	0.56	-1.2
5,280,548	+		Echvi_4416	0.56	-0.0
5,280,549	-		Echvi_4416	0.56	-1.0
5,280,643	+		Echvi_4416	0.82	-0.2
5,280,683	-				+0.7
5,280,684	+				-0.1
5,280,690	+				+0.7
5,280,691	-				-1.6
5,280,691	-				+0.7
5,280,694	+				+0.7
5,280,694	+				+0.3
5,280,694	+				-0.4
5,280,694	+				-0.1
5,280,695	-				-0.2
5,280,695	-				+0.3
5,280,695	-				-1.1
5,280,695	-				-0.3
5,280,695	-				-3.4
5,280,695	-				-1.6
5,280,695	-				-2.3
5,280,696	+				-0.9
5,280,697	-				-0.3
5,280,697	-				+2.7
5,280,697	-				-1.6
5,280,697	-				+0.3
5,280,699	+				+0.6
5,280,745	+				-1.4
5,280,747	+				+3.5
5,280,747	+				-0.7
5,280,748	-				+0.0
5,280,768	+				+1.3
5,280,784	+				-0.4
5,280,784	+				+1.3
5,280,787	-				-3.0
5,280,788	+				-0.5
5,280,789	-				-0.7
5,280,789	-				+0.5
5,280,789	-				-0.7
5,280,789	-				-0.8
5,280,789	-				+0.9
5,280,813	+				+1.2
5,280,832	-				+1.5
5,280,970	+		Echvi_4417	0.11	-2.6
5,280,970	+		Echvi_4417	0.11	-0.5
5,281,164	+		Echvi_4417	0.19	+0.4
5,281,165	-		Echvi_4417	0.19	-2.0
5,281,165	-		Echvi_4417	0.19	-0.2
5,281,203	+		Echvi_4417	0.20	-0.8
5,281,203	+		Echvi_4417	0.20	-0.7
5,281,203	+		Echvi_4417	0.20	-1.2
5,281,206	-		Echvi_4417	0.20	-0.6
5,281,267	-		Echvi_4417	0.23	-0.1
5,281,323	-		Echvi_4417	0.25	-1.7
5,281,325	+		Echvi_4417	0.25	+1.0
5,281,326	-		Echvi_4417	0.25	-0.0
5,281,387	-		Echvi_4417	0.28	+1.2
5,281,551	+		Echvi_4417	0.34	+0.3
5,281,556	+		Echvi_4417	0.35	+0.2
5,281,562	+		Echvi_4417	0.35	-1.2