Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4413

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,276,451	+		Echvi_4412	0.42	+0.2
5,276,552	+		Echvi_4412	0.49	-1.0
5,276,770	-		Echvi_4412	0.63	-2.5
5,276,849	-		Echvi_4412	0.68	-0.4
5,276,850	+		Echvi_4412	0.68	+0.3
5,276,850	+		Echvi_4412	0.68	+0.9
5,276,882	+		Echvi_4412	0.71	+0.6
5,276,883	-		Echvi_4412	0.71	-0.7
5,276,893	+		Echvi_4412	0.71	+1.7
5,276,893	+		Echvi_4412	0.71	+0.0
5,276,894	-		Echvi_4412	0.71	-0.8
5,276,894	-		Echvi_4412	0.71	-0.2
5,276,895	+		Echvi_4412	0.71	+0.3
5,276,930	+		Echvi_4412	0.74	+0.4
5,276,943	+		Echvi_4412	0.75	-1.3
5,277,032	+		Echvi_4412	0.80	-0.0
5,277,032	+		Echvi_4412	0.80	-1.1
5,277,052	-		Echvi_4412	0.82	-0.3
5,277,058	+		Echvi_4412	0.82	+1.2
5,277,059	-		Echvi_4412	0.82	-2.1
5,277,060	+		Echvi_4412	0.82	-1.3
5,277,061	-		Echvi_4412	0.82	-2.3
5,277,087	-		Echvi_4412	0.84	-1.6
5,277,188	+				+0.9
5,277,233	+				+2.6
5,277,250	-				-2.4
5,277,285	+				-0.3
5,277,286	-				+1.2
5,277,333	+				+1.5
5,277,333	+				+0.5
5,277,333	+				-0.4
5,277,333	+				+0.5
5,277,333	+				-0.7
5,277,333	+				+0.7
5,277,334	-				-1.0
5,277,334	-				-0.8
5,277,334	-				-0.4
5,277,334	-				-1.1
5,277,388	+				-0.0
5,277,434	+				+0.4
5,277,434	+				+1.0
5,277,508	-				-1.0
5,277,563	+		Echvi_4413	0.13	+0.7
5,277,563	+		Echvi_4413	0.13	+0.2
5,277,564	-		Echvi_4413	0.13	-0.8
5,277,621	+		Echvi_4413	0.16	+0.2
5,277,621	+		Echvi_4413	0.16	+1.3
5,277,621	+		Echvi_4413	0.16	-0.6
5,277,621	+		Echvi_4413	0.16	+0.4
5,277,622	-		Echvi_4413	0.16	-1.5
5,277,622	-		Echvi_4413	0.16	-2.3
5,277,749	+		Echvi_4413	0.23	+0.1
5,277,759	+		Echvi_4413	0.24	+0.5
5,277,825	+		Echvi_4413	0.28	+1.2
5,277,825	+		Echvi_4413	0.28	-1.1
5,277,825	+		Echvi_4413	0.28	+0.1
5,277,845	-		Echvi_4413	0.29	+0.7
5,277,860	+		Echvi_4413	0.30	-0.1
5,277,974	+		Echvi_4413	0.36	-1.6
5,277,974	+		Echvi_4413	0.36	-1.3
5,277,974	+		Echvi_4413	0.36	+1.2
5,277,974	+		Echvi_4413	0.36	-1.0
5,277,974	+		Echvi_4413	0.36	-2.0
5,278,040	+		Echvi_4413	0.40	+1.6
5,278,122	+		Echvi_4413	0.45	+0.6
5,278,141	-		Echvi_4413	0.46	+0.2
5,278,223	+		Echvi_4413	0.51	+0.2
5,278,395	+		Echvi_4413	0.61	-1.9
5,278,396	-		Echvi_4413	0.61	+0.7
5,278,399	+		Echvi_4413	0.61	-0.7
5,278,400	-		Echvi_4413	0.61	-1.7
5,278,400	-		Echvi_4413	0.61	-2.3
5,278,444	-		Echvi_4413	0.63	+0.2
5,278,534	+		Echvi_4413	0.69	+0.5
5,278,545	+		Echvi_4413	0.69	-0.6
5,278,545	+		Echvi_4413	0.69	-0.1
5,278,546	-		Echvi_4413	0.69	+1.5
5,278,546	-		Echvi_4413	0.69	-0.6
5,278,649	+		Echvi_4413	0.75	-1.2
5,278,806	-		Echvi_4413	0.84	-0.5
5,278,832	+		Echvi_4413	0.86	+0.4
5,278,833	-		Echvi_4413	0.86	-0.8
5,278,833	-		Echvi_4413	0.86	-0.9
5,278,940	+				+0.1
5,278,941	-				-0.6
5,278,992	+				+0.6
5,279,047	+				+1.0
5,279,076	-				-0.3
5,279,080	-				+0.4
5,279,110	+				+1.3
5,279,260	+				-1.1
5,279,260	+				+0.4
5,279,271	+				-0.5
5,279,277	-				-1.5
5,279,434	+		Echvi_4414	0.16	-1.8
5,279,552	-				-2.8
5,279,706	+				+0.4
5,279,736	+				+0.1
5,279,737	-				-1.2
5,279,737	-				-0.9
5,279,739	-				-0.8
5,279,739	-				-1.7
5,279,795	-				-1.1
5,279,803	+				+1.0
5,279,803	+				+1.3
5,279,803	+				-1.9
5,279,803	+				-0.1
5,279,804	-				-0.4
5,279,804	-				-0.2
5,279,804	-				+0.7
5,279,866	+		Echvi_4415	0.18	-1.8
5,279,888	+		Echvi_4415	0.23	-0.4
5,279,941	+		Echvi_4415	0.33	-0.0
5,279,943	+		Echvi_4415	0.34	-0.3