Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4403

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,264,439	-		Echvi_4402	0.71	+1.2
5,264,491	-		Echvi_4402	0.73	+0.0
5,264,537	-		Echvi_4402	0.75	+1.7
5,264,546	+		Echvi_4402	0.76	+1.9
5,264,546	+		Echvi_4402	0.76	+2.2
5,264,546	+		Echvi_4402	0.76	+3.1
5,264,546	+		Echvi_4402	0.76	+2.3
5,264,554	-		Echvi_4402	0.76	+3.7
5,264,633	+		Echvi_4402	0.79	+3.7
5,264,633	+		Echvi_4402	0.79	+1.1
5,264,666	+		Echvi_4402	0.80	+3.9
5,264,687	+		Echvi_4402	0.81	+3.1
5,264,688	-		Echvi_4402	0.81	+2.5
5,264,691	+				+3.5
5,264,821	+		Echvi_4402	0.86	+3.3
5,264,851	+		Echvi_4402	0.87	+4.0
5,264,852	-		Echvi_4402	0.87	+3.2
5,264,852	-		Echvi_4402	0.87	+3.0
5,264,886	+		Echvi_4402	0.89	+3.3
5,264,887	-		Echvi_4402	0.89	+1.7
5,264,889	+		Echvi_4402	0.89	+3.5
5,264,895	+		Echvi_4402	0.89	+4.7
5,265,177	+				+2.9
5,265,177	+				+3.6
5,265,177	+				+2.4
5,265,177	+				+2.9
5,265,177	+				+3.2
5,265,177	+				+2.4
5,265,177	+				+2.9
5,265,178	-				+3.4
5,265,181	+				+2.7
5,265,181	+				+3.1
5,265,182	-				+2.0
5,265,182	-				+2.4
5,265,221	+				+3.9
5,265,222	-				+1.4
5,265,224	+				+3.7
5,265,224	+				+3.1
5,265,351	+				+3.2
5,265,374	+				+3.4
5,265,375	-				-2.1
5,265,375	-				-0.8
5,265,375	-				+0.5
5,265,424	-				-1.3
5,265,481	+		Echvi_4403	0.17	+2.2
5,265,527	+		Echvi_4403	0.32	+3.2
5,265,527	+		Echvi_4403	0.32	+3.2
5,265,529	+		Echvi_4403	0.33	+3.0
5,265,529	+		Echvi_4403	0.33	+3.4
5,265,529	+		Echvi_4403	0.33	+3.1
5,265,529	+		Echvi_4403	0.33	+2.4
5,265,583	-		Echvi_4403	0.51	+1.1
5,265,617	-		Echvi_4403	0.62	-0.4
5,265,628	-		Echvi_4403	0.65	-0.3
5,265,628	-		Echvi_4403	0.65	+0.4
5,265,628	-		Echvi_4403	0.65	+0.5
5,265,628	-		Echvi_4403	0.65	+0.2
5,265,628	-		Echvi_4403	0.65	-1.2
5,265,682	+		Echvi_4403	0.83	+3.5
5,265,696	+		Echvi_4403	0.88	+2.4
5,265,696	+		Echvi_4403	0.88	+3.3
5,265,706	-				+0.3
5,265,709	+				+3.1
5,265,710	-				+1.3
5,265,710	-				+0.4
5,265,741	-				+1.7
5,265,747	+				+3.1
5,265,747	+				+2.4
5,265,751	+				+3.5
5,265,769	+				+3.1
5,265,786	-				-0.3
5,265,786	-				-0.5
5,265,873	+				+3.1
5,265,874	-				-2.3
5,265,876	+				+3.7
5,265,876	+				+3.1
5,265,877	-				-1.8
5,265,891	+				+2.3
5,265,919	-				+0.9
5,265,930	+				+2.9
5,265,930	+				+3.2
5,265,931	-				+0.5
5,265,931	-				+0.4
5,265,995	+				+2.9
5,266,056	+		Echvi_4404	0.14	+2.5
5,266,057	-		Echvi_4404	0.14	+1.3
5,266,057	-		Echvi_4404	0.14	-0.8
5,266,057	-		Echvi_4404	0.14	+1.7
5,266,067	-		Echvi_4404	0.15	+3.0
5,266,071	+		Echvi_4404	0.15	+2.7
5,266,072	-		Echvi_4404	0.15	+0.2
5,266,072	-		Echvi_4404	0.15	+1.1
5,266,072	-		Echvi_4404	0.15	-0.7
5,266,092	+		Echvi_4404	0.16	+3.1
5,266,092	+		Echvi_4404	0.16	+3.1
5,266,092	+		Echvi_4404	0.16	+3.5
5,266,092	+		Echvi_4404	0.16	+2.4
5,266,092	+		Echvi_4404	0.16	+3.8
5,266,092	+		Echvi_4404	0.16	+1.5
5,266,092	+		Echvi_4404	0.16	+2.7
5,266,092	+		Echvi_4404	0.16	+3.5
5,266,093	-		Echvi_4404	0.17	-0.7
5,266,093	-		Echvi_4404	0.17	+0.6
5,266,093	-		Echvi_4404	0.17	+0.2
5,266,093	-		Echvi_4404	0.17	+0.5
5,266,093	-		Echvi_4404	0.17	+0.7
5,266,093	-		Echvi_4404	0.17	+0.6
5,266,093	-		Echvi_4404	0.17	-0.5
5,266,094	+		Echvi_4404	0.17	+3.2
5,266,094	+		Echvi_4404	0.17	+4.4
5,266,094	+		Echvi_4404	0.17	+3.2
5,266,095	-		Echvi_4404	0.17	+1.9
5,266,095	-		Echvi_4404	0.17	+0.3
5,266,129	-		Echvi_4404	0.19	+0.5
5,266,158	-		Echvi_4404	0.21	+1.7
5,266,172	+		Echvi_4404	0.23	+2.5
5,266,173	-		Echvi_4404	0.23	+1.5
5,266,173	-		Echvi_4404	0.23	-0.8
5,266,204	+		Echvi_4404	0.25	+3.2
5,266,289	+		Echvi_4404	0.31	+2.4
5,266,289	+		Echvi_4404	0.31	+2.8
5,266,342	+				+2.7
5,266,342	+		Echvi_4404	0.35	+2.8
5,266,342	+		Echvi_4404	0.35	+2.8
5,266,345	-		Echvi_4404	0.36	+1.0
5,266,345	-		Echvi_4404	0.36	+0.0
5,266,351	-		Echvi_4404	0.36	-2.2
5,266,379	+		Echvi_4404	0.38	+2.3
5,266,427	-		Echvi_4404	0.42	+0.5
5,266,427	-		Echvi_4404	0.42	-1.7
5,266,469	+		Echvi_4404	0.45	+3.0
5,266,560	+		Echvi_4404	0.52	+3.8
5,266,593	+		Echvi_4404	0.55	+1.7
5,266,594	-		Echvi_4404	0.55	+1.9
5,266,594	-		Echvi_4404	0.55	+1.7
5,266,627	+		Echvi_4404	0.57	+2.8
5,266,627	+		Echvi_4404	0.57	+2.7
5,266,628	-		Echvi_4404	0.57	+0.3
5,266,628	-		Echvi_4404	0.57	-2.0
5,266,628	-		Echvi_4404	0.57	+1.7
5,266,628	-		Echvi_4404	0.57	-0.3
5,266,629	+		Echvi_4404	0.57	+3.1
5,266,629	+		Echvi_4404	0.57	+3.3
5,266,629	+		Echvi_4404	0.57	+2.9
5,266,629	+		Echvi_4404	0.57	+3.9
5,266,630	-		Echvi_4404	0.57	+0.4
5,266,630	-		Echvi_4404	0.57	-0.0
5,266,631	+		Echvi_4404	0.57	+2.5
5,266,631	+		Echvi_4404	0.57	+1.4
5,266,631	+		Echvi_4404	0.57	+2.8
5,266,632	-		Echvi_4404	0.57	+0.7
5,266,632	-		Echvi_4404	0.57	-1.4
5,266,727	+		Echvi_4404	0.65	+1.8